>SLC887 (SLC887Q) /CSM/SL/SLC8-D/SLC887Q.Seq.d/
XXXXXXXXXXACCAACTCATAGACCAAAACCACCACACCATGGTTGTCGTCCAGATAGTT
GCGCTAGAGGTGAGAAATGTATCTGTGTACGTGGTAAGATCTATTGTATTCCAAAGACCA
CCTGTGATCAAGTACGTTGTCCAAGAAAACACCATTGTGAATGCAATAGAAAAGGTCAAG
TTTTCTGTGNTCCAGATTGTCCAAAATTAACTTGTAAACAAGTTGGTTGCCCAGAAAACC
ATGAATGCGTTTCAAGACGTGGTGAACTCCATTGTGTATACGTTAGACCACCAACAGGTA
GATGGGGTGATGATCTCTCAGATTTAGGTTACAATCAAGCAAGTGTTGAAGCTGCAATTG
ATGCTTATGAAGCCCAAAGGGGTCAAAGACCACATAATAATATTCCATCAAACAATTTAC
ATCAAGAAAACAATGATAATTTGGGTGATGGTTTTTATGATGGTGTTGAAATTGGTTTCG
CTGACGGAGGTTTCGACGTAAACGATCTCAATGGTTTTTAAAAAAAAAAAAAAAATAATT
ATTAAATTTTTAAAATTATAAATAATAATCTTCTTATGAAAAAAAAAAAAAAAAAAAAAA
AAAATCA

---PTHRPKPPHHGCRPDSCARGEKCICVRGKIYCIPKTTCDQVRCPRKHHCECNRKGQV
FCXPDCPKLTCKQVGCPENHECVSRRGELHCVYVRPPTGRWGDDLSDLGYNQASVEAAID
AYEAQRGQRPHNNIPSNNLHQENNDNLGDGFYDGVEIGFADGGFDVNDLNGF*kkkknny
*ifkiinnnllmkkkkkkkkn

Frame A:
---PTHRPKPPHHGCRPDSCARGEKCICVRGKIYCIPKTTCDQVRCPRKHHCECNRKGQV
FCXPDCPKLTCKQVGCPENHECVSRRGELHCVYVRPPTGRWGDDLSDLGYNQASVEAAID
AYEAQRGQRPHNNIPSNNLHQENNDNLGDGFYDGVEIGFADGGFDVNDLNGF*kkkknny
*ifkiinnnllmkkkkkkkkn


Frame B:
---qlidqnhhtmvvvqivalevrnvsvyvvrsivfqrppvikyvvqentivnaiekvkf
svxqivqn*lvnklvaqktmnafqdvvnsivytldhqqvdgvmisqi*vtikqvlklqlm
lmkpkgvkdhiiifhqtiyikktmiiwvmvfmmvlklvsltevst*tismvfkkkkkiii
kflkl*iiifl*kkkkkkkki


Frame C:
---ns*tktttpwlssr*lr*r*emylctw*dllyskdhl*sstlskktpl*mq*krssf
lxsrlskinl*tswlprkp*mrfktw*tplcir*ttnr*mg**slrfrlqsskc*scn*c
l*spkgsktt**ysikqftsrkq**fg*wfl*wc*nwfr*rrfrrkrsqwflkkkkk*ll
nf*nyk**ssyekkkkkkkks

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLI883 (SLI883Q) /CSM/SL/SLI8-D/SLI883Q.Seq.d/                       1003   0.0
SLI370 (SLI370Q) /CSM/SL/SLI3-C/SLI370Q.Seq.d/                       1003   0.0
SLG187 (SLG187Q) /CSM/SL/SLG1-D/SLG187Q.Seq.d/                       1003   0.0
SLE234 (SLE234Q) /CSM/SL/SLE2-B/SLE234Q.Seq.d/                       1003   0.0
SLE215 (SLE215Q) /CSM/SL/SLE2-A/SLE215Q.Seq.d/                       1003   0.0
SLC887 (SLC887Q) /CSM/SL/SLC8-D/SLC887Q.Seq.d/                       1003   0.0
SLC695 (SLC695Q) /CSM/SL/SLC6-D/SLC695Q.Seq.d/                       1003   0.0
SLC649 (SLC649Q) /CSM/SL/SLC6-C/SLC649Q.Seq.d/                       1003   0.0
SLC537 (SLC537Q) /CSM/SL/SLC5-B/SLC537Q.Seq.d/                       1003   0.0
SLC364 (SLC364Q) /CSM/SL/SLC3-C/SLC364Q.Seq.d/                       1003   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence.  1003   0.0    2
AF066071|AF066071.1 Dictyostelium discoideum SP85 (pspB) gene, complete cds.  1003   0.0    2
S72639|S72639.1 PspB=prespore-specific gene {5' region} [Dictyostelium discoideum, Genomic, 1918 nt].   626   0.0    3
X16491|X16491.1 Dictyostelium discoideum sp96 gene for spore coat protein SP96.    56   6e-04  1
AF466146|AF466146.1 Melipona bicolor mitochondrial genome, partial sequence.    44   0.002  3
CD483437|CD483437.1 atr01-25ms1-a09 Atr01 Amborella trichopoda cDNA clone atr01-25ms1-a09 5', mRNA sequence.    54   0.002  1
BX936297|BX936297.3 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone.    38   0.019  4
AL672269|AL672269.15 Mouse DNA sequence from clone RP23-57F11 on chromosome 11.    46   0.019  4
AC136326|AC136326.2 Mus musculus clone RP23-306K16, LOW-PASS SEQUENCE SAMPLING.    40   0.024  2
AX346829|AX346829.1 Sequence 1900 from Patent WO0200928.           38   0.025  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P54704) RecName: Full=Spore coat protein SP85; AltName: Full=Ce...   357   2e-97
S72639_1(S72639|pid:none) PspB=prespore-specific gene {5' region...   225   8e-58
(P15270) RecName: Full=Spore coat protein SP60; Flags: Precursor...    93   6e-18
(P15269) RecName: Full=Spore coat protein SP70; AltName: Full=Pr...    53   7e-06
(Q54QX2) RecName: Full=Probable spore coat protein DDB_G0283555;...    50   5e-05
(Q04503) RecName: Full=Prespore protein Dp87; Flags: Precursor;        47   3e-04
AF245486_1(AF245486|pid:none) Polysphondylium pallidum spore coa...    45   0.002
X52105_1(X52105|pid:none) Dictyostelium discoideum SP60 gene for...    44   0.003
D13973_1(D13973|pid:none) Dictyostelium discoideum gene for Dp87...    44   0.004
AC117267_7(AC117267|pid:none) Dictyostelium discoideum chromosom...    41   0.029

 psg: 0.59  gvh: 0.29  alm: 0.54  top: 0.53  tms: 0.00  mit: 0.26  mip: 0.03
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: cytoplasmic
	 28.0 %: mitochondrial
	 28.0 %: nuclear
	 12.0 %: cytoskeletal

>> prediction for SLC887 is cyt

>SLC887Z.Seq
----------ACCAACTCATAGACCAAAACCACCACACCATGGTTGTCGTCCAGATAGTT
GCGCTAGAGGTGAGAAATGTATCTGTGTACGTGGTAAGATCTATTGTATTCCAAAGACCA
CCTGTGATCAAGTACGTTGTCCAAGAAAACACCATTGTGAATGCAATAGAAAAGGTCAAG
TTTTCTGTGNTCCAGATTGTCCAAAATTAACTTGTAAACAAGTTGGTTGCCCAGAAAACC
ATGAATGCGTTTCAAGACGTGGTGAACTCCATTGTGTATACGTTAGACCACCAACAGGTA
GATGGGGTGATGATCTCTCAGATTTAGGTTACAATCAAGCAAGTGTTGAAGCTGCAATTG
ATGCTTATGAAGCCCAAAGGGGTCAAAGACCACATAATAATATTCCATCAAACAATTTAC
ATCAAGAAAACAATGATAATTTGGGTGATGGTTTTTATGATGGTGTTGAAATTGGTTTCG
CTGACGGAGGTTTCGACGTAAACGATCTCAATGGTTTTTAAAAAAAAAAAAAAAATAATT
ATTAAATTTTTAAAATTATAAATAATAATCTTCTTATGAAAAAAAAAAAAAAAAAAAAAA
AAAATCA