>SLC647 (SLC647Q) /CSM/SL/SLC6-B/SLC647Q.Seq.d/
XXXXXXXXXXTGACTCCACAAAAGAAGACTGATGAAGAATGTTGTCCAATTATTCCAATC
TGTATCAATCCATCAACTATTGCCGCATCCACTATTGCCACTACAACTGCATCAACTCGT
CACTCAACTGCCTCAACAATTGCCTCATTAGTCACTGGTACCACAAGTGGTGGTGGTGGT
ATGGGTTCATTTGGTGGTCGATCCGATGAAGAATCAAGTGATCCAAATGCTATACTTGGT
CTCTTTGAAGACGATATTTTCTGGGGTGATAATGATGAATACTTTAGTGATAACTACCGT
TATGTTGATGAAGAAGATATTGATGAAGATTTCAATGGTAATGATGAATTTGAAATTGAT
GTTGAAGGTGATTTCCAAGAAGATGATTTCGAAGAAGAATATGCATTTTATTAAATTAAA
CTTTTTTTCATTTTAAAATAATAATAATAATTTAATAACTAATCATTATCATCAATAATA
ACATTATAATATTACTTTAATAACAATACTTTTTTTTAATATTCAAAGACTTTACAAAAA
AAAAAA

---TPQKKTDEECCPIIPICINPSTIAASTIATTTASTRHSTASTIASLVTGTTSGGGGM
GSFGGRSDEESSDPNAILGLFEDDIFWGDNDEYFSDNYRYVDEEDIDEDFNGNDEFEIDV
EGDFQEDDFEEEYAFY*iklffilk****fnn*slssiitl*yyfnnntff*ysktlqkk
k

Frame A:
---dstked**rmlsnysnlyqsinycrihychyncinsslnclnnclishwyhkwwwwy
gfiwwsir*rik*skcytwsl*rryflg****il***lplc**rry**rfqw***i*n*c
*r*fprr*frrricilln*tffhfkiiiii**liiiinnniiill**qyfflifkdftkk
k


Frame B:
---TPQKKTDEECCPIIPICINPSTIAASTIATTTASTRHSTASTIASLVTGTTSGGGGM
GSFGGRSDEESSDPNAILGLFEDDIFWGDNDEYFSDNYRYVDEEDIDEDFNGNDEFEIDV
EGDFQEDDFEEEYAFY*iklffilk****fnn*slssiitl*yyfnnntff*ysktlqkk
k


Frame C:
---lhkrrlmknvvqlfqsvsihqllphpllplqlhqlvtqlpqqlph*slvpqvvvvvw
vhlvvdpmknqviqmlylvslktifsgvimmntlvittvmlmkkilmkismvmmnlklml
kviskkmiskknmhfiklnffsf*nnnnnlitnhyhq**hynitlitilffniqrlykkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSM572 (SSM572Q) /CSM/SS/SSM5-C/SSM572Q.Seq.d/                        805   0.0
SSM396 (SSM396Q) /CSM/SS/SSM3-D/SSM396Q.Seq.d/                        805   0.0
SSL605 (SSL605Q) /CSM/SS/SSL6-A/SSL605Q.Seq.d/                        805   0.0
SSK815 (SSK815Q) /CSM/SS/SSK8-A/SSK815Q.Seq.d/                        805   0.0
SSJ101 (SSJ101Q) /CSM/SS/SSJ1-A/SSJ101Q.Seq.d/                        805   0.0
SSG296 (SSG296Q) /CSM/SS/SSG2-D/SSG296Q.Seq.d/                        805   0.0
SSF391 (SSF391Q) /CSM/SS/SSF3-D/SSF391Q.Seq.d/                        805   0.0
SSF386 (SSF386Q) /CSM/SS/SSF3-D/SSF386Q.Seq.d/                        805   0.0
SSF203 (SSF203Q) /CSM/SS/SSF2-A/SSF203Q.Seq.d/                        805   0.0
SSE674 (SSE674Q) /CSM/SS/SSE6-D/SSE674Q.Seq.d/                        805   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU034624) Dictyostelium discoideum slug cDNA, clone SLC647.      781   0.0    2
(AU052919) Dictyostelium discoideum slug cDNA, clone SLF321.      781   0.0    2
(AU033957) Dictyostelium discoideum slug cDNA, clone SLB657.      781   0.0    2
(AU039870) Dictyostelium discoideum slug cDNA, clone SLG626.      781   0.0    2
(AU052468) Dictyostelium discoideum slug cDNA, clone SLD373.      781   0.0    2
(AU052461) Dictyostelium discoideum slug cDNA, clone SLD357.      781   0.0    2
(AU034231) Dictyostelium discoideum slug cDNA, clone SLC295.      781   0.0    2
(AU039109) Dictyostelium discoideum slug cDNA, clone SSM396.      781   0.0    2
(C94447) Dictyostelium discoideum slug cDNA, clone SSK815.        781   0.0    2
(AU052778) Dictyostelium discoideum slug cDNA, clone SLK657.      781   0.0    2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P15269) RecName: Full=Spore coat protein SP70; AltName: Full=Pr...   118   9e-26
(Q1AGV7) RecName: Full=Syndecan 4-A; AltName: Full=Syndecan-4.1;...    36   0.56
BC131894_1(BC131894|pid:none) Xenopus laevis syndecan-4.1, mRNA ...    36   0.56
A96599(A96599) protein F20N2.10 [imported] - Arabidopsis thalian...    35   1.6
CP001357_1645(CP001357|pid:none) Brachyspira hyodysenteriae WA1,...    34   2.8
CP000492_1690(CP000492|pid:none) Chlorobium phaeobacteroides DSM...    33   4.7
EF568108_144(EF568108|pid:none) Glossina pallidipes salivary gla...    33   4.7
AE001362_82(AE001362|pid:none) Plasmodium falciparum 3D7 chromos...    33   4.7
AY579380_1(AY579380|pid:none) Pristionchus pacificus transformer...    33   6.1
CP000107_18(CP000107|pid:none) Ehrlichia canis str. Jake, comple...    32   8.0

 psg: 0.75  gvh: 0.53  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.25  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 40.0 %: nuclear
	 16.0 %: mitochondrial
	  4.0 %: cytoskeletal

>> prediction for SLC647 is cyt

>SLC647Z.Seq
----------TGACTCCACAAAAGAAGACTGATGAAGAATGTTGTCCAATTATTCCAATC
TGTATCAATCCATCAACTATTGCCGCATCCACTATTGCCACTACAACTGCATCAACTCGT
CACTCAACTGCCTCAACAATTGCCTCATTAGTCACTGGTACCACAAGTGGTGGTGGTGGT
ATGGGTTCATTTGGTGGTCGATCCGATGAAGAATCAAGTGATCCAAATGCTATACTTGGT
CTCTTTGAAGACGATATTTTCTGGGGTGATAATGATGAATACTTTAGTGATAACTACCGT
TATGTTGATGAAGAAGATATTGATGAAGATTTCAATGGTAATGATGAATTTGAAATTGAT
GTTGAAGGTGATTTCCAAGAAGATGATTTCGAAGAAGAATATGCATTTTATTAAATTAAA
CTTTTTTTCATTTTAAAATAATAATAATAATTTAATAACTAATCATTATCATCAATAATA
ACATTATAATATTACTTTAATAACAATACTTTTTTTTAATATTCAAAGACTTTACAAAAA
AAAAAA