>SLC549 (SLC549Q) /CSM/SL/SLC5-C/SLC549Q.Seq.d/
GATGGTGAAGATGTTCAAGCTTTAGTTATTGATAACGGTTCTGGTATGTGTAAAGCCGGT
TTTGCTGGTGACGATGCTCCACGTGCTGTTTTCCCATCAATTGTTGGTCGTCCAAGACAC
ACTGGTGTTATGGTTGGTATGGGTCAAAAAGACTCATATGTAGGTGATGAAGCCCAATCA
AAGAGAGGTATCTTAACCCTCAAATACCCAATTGAACACGGTATCGTTACCAACTGGGAT
GATATGGAAAAAATCTGGCATCATACTTTCTACAATGAACTCCGTGTTGCACCAGAAGAA
CACCCAGTTCTCTTAACCGAAGCTCCATTAAATCCAAAAGCCAACAGAGAAAAAATGACC
CAAATTATGTTTGAAACCTTCAACACCCCAGCCATGTACGTTGCCATTCAAGCCGTCTTA
TCCTTATATGCCTCTGGTCGTACCACCGGTATTGTTATGGATTCAGGTGATGGTGTCTCC
CACACTGTACCAATCTATGAAGGTTATGCCTTACCACATGCCATCTTACGTTTAGATTTA
GCTGGTCGTGATCTCACCGATTACATGATGAAAATCTTAACTGAACGTGGTTACTCATTC
ACCACCACTGCCGAAAGAGAAATCGTCAGAGATATCACAGAGAAATTAGCCTACGTCGCC
CTCGACTTTGAAGCTGAAATGCAAACTGCTGCTCATCATCAGCCCTCGAXXXXXXXXXX

DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYMMKILTERGYSFTTTAEREIVRDITEKLAYVALDFEAEMQTAAHHQPS---

Frame A:
DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYMMKILTERGYSFTTTAEREIVRDITEKLAYVALDFEAEMQTAAHHQPS---


Frame B:
mvkmfkl*llitvlvcvkpvllvtmlhvlfshqllvvqdtlvlwlvwvkkthm*vmkpnq
revs*psntqlntvslptgmiwkksgiilstmnsvlhqkntqfs*pklh*iqkptekk*p
klclkpstpqpctlpfkpsypymplvvppvllwiqvmvsptlyqsmkvmpyhmpsyv*i*
lvvispit**ks*lnvvthspplpkeksseisqrn*ptspstlklkckllliisp---


Frame C:
w*rcssfsy**rfwyv*srfcw*rcstccfpincwsskthwcygwygskrlicr**spik
erylnpqipn*tryryqlg*ygknlasyflq*tpcctrrtpsslnrssiksksqqrkndp
nyv*nlqhpshvrchssrliliclwsyhrycygfr*wclphctnl*rlclttchltfrfs
ws*shrlhdenln*twllihhhcrkrnrqryhreislrrprl*s*nanccsssal---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLC549 (SLC549Q) /CSM/SL/SLC5-C/SLC549Q.Seq.d/                       1405   0.0
SLA490 (SLA490Q) /CSM/SL/SLA4-D/SLA490Q.Seq.d/                       1352   0.0
SLH494 (SLH494Q) /CSM/SL/SLH4-D/SLH494Q.Seq.d/                       1342   0.0
SLG493 (SLG493Q) /CSM/SL/SLG4-D/SLG493Q.Seq.d/                       1336   0.0
SLH344 (SLH344Q) /CSM/SL/SLH3-B/SLH344Q.Seq.d/                       1316   0.0
SLE330 (SLE330Q) /CSM/SL/SLE3-B/SLE330Q.Seq.d/                       1316   0.0
SLA439 (SLA439Q) /CSM/SL/SLA4-B/SLA439Q.Seq.d/                       1300   0.0
SLE295 (SLE295Q) /CSM/SL/SLE2-D/SLE295Q.Seq.d/                       1298   0.0
VFJ848 (VFJ848Q) /CSM/VF/VFJ8-B/VFJ848Q.Seq.d/                       1291   0.0
VFO588 (VFO588Q) /CSM/VF/VFO5-D/VFO588Q.Seq.d/                       1283   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU060993) Dictyostelium discoideum slug cDNA, clone SLC549.     1405   0.0    1
(DL184440) Protein expression method.                            1364   0.0    2
(DL184438) Protein expression method.                            1364   0.0    2
(M14146) D.discoideum actin 15 gene, complete cds.               1364   0.0    2
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084...  1364   0.0    2
(AU061891) Dictyostelium discoideum slug cDNA, clone SLG493.     1336   0.0    1
(AU060162) Dictyostelium discoideum slug cDNA, clone SLA490.     1332   0.0    2
(DL184439) Protein expression method.                            1324   0.0    1
(DL184437) Protein expression method.                            1324   0.0    1
(U25660) Dictyostelium discoideum actin gene, partial cds.       1324   0.0    2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54H30) RecName: Full=Major actin; AltName: Full=Actin-1; AltNa...   465   e-130
(Q553U6) RecName: Full=Putative actin-22;  &AC116305_3(AC116305|...   465   e-130
ATDO(A93223;A92871;S67999;A03004)actin - slime mold (Dictyosteli...   461   e-128
(P02576) RecName: Full=Actin, plasmodial isoform;  &ATFY(A29044;...   461   e-128
B23412(B23412)actin 12 - slime mold (Dictyostelium discoideum)        459   e-128
X03282_1(X03282|pid:none) dictyostelium discoideum gene for acti...   457   e-127
AY294152_1(AY294152|pid:none) Mayorella sp. JJP-2003 actin mRNA,...   457   e-127
(P07829) RecName: Full=Actin-3; AltName: Full=Actin-3-sub 1;          454   e-126
AY294154_1(AY294154|pid:none) Thecamoeba similis actin mRNA, com...   454   e-126
AY294153_1(AY294153|pid:none) Platyamoeba placida actin mRNA, pa...   452   e-126

 psg: 0.75  gvh: 0.34  alm: 0.42  top: 0.53  tms: 0.00  mit: 0.07  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: nuclear
	 36.0 %: cytoplasmic
	  8.0 %: vesicles of secretory system
	  4.0 %: vacuolar
	  4.0 %: mitochondrial

>> prediction for SLC549 is nuc

>SLC549F.Seq
GATGGTGAAGATGTTCAAGCTTTAGTTATTGATAACGGTTCTGGTATGTGTAAAGCCGGT
TTTGCTGGTGACGATGCTCCACGTGCTGTTTTCCCATCAATTGTTGGTCGTCCAAGACAC
ACTGGTGTTATGGTTGGTATGGGTCAAAAAGACTCATATGTAGGTGATGAAGCCCAATCA
AAGAGAGGTATCTTAACCCTCAAATACCCAATTGAACACGGTATCGTTACCAACTGGGAT
GATATGGAAAAAATCTGGCATCATACTTTCTACAATGAACTCCGTGTTGCACCAGAAGAA
CACCCAGTTCTCTTAACCGAAGCTCCATTAAATCCAAAAGCCAACAGAGAAAAAATGACC
CAAATTATGTTTGAAACCTTCAACACCCCAGCCATGTACGTTGCCATTCAAGCCGTCTTA
TCCTTATATGCCTCTGGTCGTACCACCGGTATTGTTATGGATTCAGGTGATGGTGTCTCC
CACACTGTACCAATCTATGAAGGTTATGCCTTACCACATGCCATCTTACGTTTAGATTTA
GCTGGTCGTGATCTCACCGATTACATGATGAAAATCTTAACTGAACGTGGTTACTCATTC
ACCACCACTGCCGAAAGAGAAATCGTCAGAGATATCACAGAGAAATTAGCCTACGTCGCC
CTCGACTTTGAAGCTGAAATGCAAACTGCTGCTCATCATCAGCCCTCGA----------