AFK185
Library AF
(Link to library)
Clone ID AFK185
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U16252-1
Original site URL
Representative seq. ID AFK185F
(Link to Original site)
Representative DNA sequence
>AFK185 (AFK185Q) /CSM/AF/AFK1-D/AFK185Q.Seq.d/
ATATATATCATTTTTTAAAATGAGCGTCATCAAATCAATTAAAGCCAGAGAAATTTTAGA
TTCACGTGGTAACCCAACTGTTGAAGTTGACCTTTACACCGAAAAAGATGGTGTTGTTTC
ATCATTCAGAGCTGCAGTTCCATCAGGTGCATCAACTGGTATTTATGAAGCTGTTGAATT
AAGAGATGGTGATAAATCAAGATACTTAGGTAAAGGTGTACTCAAAGCAATCAAAAACAT
TCTCGAAGTCATTCAACCAGCCGTCATTGGTAAATCAGTTTCCGATCAAGCTGCTATCGA
TAAATTAATGATCGATCTCGATGGTACCCCAAATAAAGGTAAATTAGGTGCCAACGCTAT
CCTTGCAGTCAGTTTAGCTGTTTGCAGAGCTGGTGCTGCTGATAGAAATTTACCACTTTA
CAAATATATCTCAGAAATTGCAGGTACTAAAATGAGATTACCAGTTCCAGCATTCAATGT
TATCAATGGTGGTTCACATGCAGGTAATAAATTAGCTATGCAAGAATTTATGATTTTACC
AGTTGGTGCTAAAGATTTCAATGAAGCCTATCGTATGGGTTCAGAAGTTTATCATAACTT
AAAGAATGTCATCAGTGGTAGATACXXXXXXXXXX
sequence update 2001. 6. 1
Translated Amino Acid sequence
YISFFKMSVIKSIKAREILDSRGNPTVEVDLYTEKDGVVSSFRAAVPSGASTGIYEAVEL
RDGDKSRYLGKGVLKAIKNILEVIQPAVIGKSVSDQAAIDKLMIDLDGTPNKGKLGANAI
LAVSLAVCRAGAADRNLPLYKYISEIAGTKMRLPVPAFNVINGGSHAGNKLAMQEFMILP
VGAKDFNEAYRMGSEVYHNLKNVISGR---


Translated Amino Acid sequence (All Frames)
Frame A:
iyiif*nerhqin*sqrnfrftw*pnc*s*plhrkrwccfiiqscssircinwyl*sc*i
krw**ikilr*rctqsnqkhsrshstsrhw*isfrsscyr*indrsrwypk*r*ircqry
pcsqfsclqswcc**kfttlqiylrncry*neitsssiqcyqwwftcr**isyariydft
swc*rfq*slsygfrsls*lkechqw*i---


Frame B:
YISFFKMSVIKSIKAREILDSRGNPTVEVDLYTEKDGVVSSFRAAVPSGASTGIYEAVEL
RDGDKSRYLGKGVLKAIKNILEVIQPAVIGKSVSDQAAIDKLMIDLDGTPNKGKLGANAI
LAVSLAVCRAGAADRNLPLYKYISEIAGTKMRLPVPAFNVINGGSHAGNKLAMQEFMILP
VGAKDFNEAYRMGSEVYHNLKNVISGR---


Frame C:
iyhflk*assnqlkpekf*ihvvtqllkltftpkkmvlfhhselqfhqvhqlvfmklln*
emvinqdt*vkvyskqsktfsksfnqpslvnqfpikllsin**sismvpqikvn*vptls
lqsv*lfaelvllieiyhftnisqklqvlk*dyqfqhsmlsmvvhmqvin*lcknl*fyq
lvlkismkpivwvqkfiit*rmssvvd---


Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

VFB851 (VFB851Q) /CSM/VF/VFB8-C/VFB851Q.Seq.d/ 1239 0.0
SSM734 (SSM734Q) /CSM/SS/SSM7-B/SSM734Q.Seq.d/ 1239 0.0
SLA770 (SLA770Q) /CSM/SL/SLA7-C/SLA770Q.Seq.d/ 1239 0.0
SFH339 (SFH339Q) /CSM/SF/SFH3-B/SFH339Q.Seq.d/ 1239 0.0
SFC211 (SFC211Q) /CSM/SF/SFC2-A/SFC211Q.Seq.d/ 1239 0.0
AFO869 (AFO869Q) /CSM/AF/AFO8-C/AFO869Q.Seq.d/ 1239 0.0
AFO860 (AFO860Q) /CSM/AF/AFO8-C/AFO860Q.Seq.d/ 1239 0.0
AFK185 (AFK185Q) /CSM/AF/AFK1-D/AFK185Q.Seq.d/ 1239 0.0
AFE445 (AFE445Q) /CSM/AF/AFE4-B/AFE445Q.Seq.d/ 1239 0.0
AFD204 (AFD204Q) /CSM/AF/AFD2-A/AFD204Q.Seq.d/ 1239 0.0

own update 2001. 6.10
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

BI504877|BI504877.1 BB170011A20G10.5 Bee Brain Normalized/Subtracted Library, BB17 Apis mellifera cDNA clone BB170011A20G10 5', mRNA sequence. 125 2e-31 2
AX619982|AX619982.1 Sequence 2945 from Patent WO02094868. 50 2e-28 6
BD237140|BD237140.1 Staphylococcus aureus gene and polypeptide. 50 4e-28 6
AR282358|AR282358.1 Sequence 21 from patent US 6521441. 50 4e-28 6
AF065394|AF065394.1 Staphylococcus aureus enolase (eno) gene, complete cds. 50 4e-28 6
AR354089|AR354089.1 Sequence 207 from patent US 6593114. 50 5e-28 6
BE580531|BE580531.1 kq41g08.y1 TBN95TM-SSR Strongyloides stercoralis cDNA 5' similar to WP:T21B10.2 CE03684 ENOLASE ;, mRNA sequence. 78 6e-27 3
Y17298|Y17298.1 Cunninghamella elegans mRNA for enolase. 86 7e-27 5
BI511389|BI511389.1 BB160005B10G04 Bee Brain Normalized Library, BB16 Apis mellifera cDNA clone BB160005B10G04 5', mRNA sequence. 125 7e-25 1
BM164058|BM164058.1 EST566581 PyBS Plasmodium yoelii yoelii cDNA clone PYCLP21 5' end, mRNA sequence. 82 6e-24 2
dna update 2003. 9. 7
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(Q54RK5) RecName: Full=Enolase A; EC=4.2.1.11; AltName:... 391 e-108
BC045082_1(BC045082|pid:none) Xenopus laevis enolase 3, beta mus... 275 6e-73
EF137905_1(EF137905|pid:none) Helianthus annuus plastid enolase ... 275 7e-73
BC096516_1(BC096516|pid:none) Xenopus tropicalis hypothetical pr... 275 1e-72
DQ497988_1(DQ497988|pid:none) Polypterus senegalus enolase B mRN... 273 2e-72
DQ497989_1(DQ497989|pid:none) Typhlonectes natans enolase B mRNA... 273 3e-72
DQ497985_1(DQ497985|pid:none) Polypterus senegalus enolase A mRN... 271 8e-72
(Q9W7L0) RecName: Full=Alpha-enolase; EC=4.2.1.11; AltN... 271 8e-72
BC054169_1(BC054169|pid:none) Xenopus laevis enolase 1, alpha, m... 271 1e-71
AC016662_10(AC016662|pid:none) Arabidopsis thaliana chromosome 1... 271 1e-71
protein update 2009. 4.24
PSORT

psg: 0.57 gvh: 0.46 alm: 0.36 top: 0.53 tms: 0.00 mit: 0.35 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

32.0 %: cytoplasmic
32.0 %: nuclear
20.0 %: mitochondrial
8.0 %: cytoskeletal
4.0 %: vacuolar
4.0 %: vesicles of secretory system

>> prediction for AFK185 is cyt

5' end seq. ID AFK185F
5' end seq.
>AFK185F.Seq
ATATATATCATTTTTTAAAATGAGCGTCATCAAATCAATTAAAGCCAGAGAAATTTTAGA
TTCACGTGGTAACCCAACTGTTGAAGTTGACCTTTACACCGAAAAAGATGGTGTTGTTTC
ATCATTCAGAGCTGCAGTTCCATCAGGTGCATCAACTGGTATTTATGAAGCTGTTGAATT
AAGAGATGGTGATAAATCAAGATACTTAGGTAAAGGTGTACTCAAAGCAATCAAAAACAT
TCTCGAAGTCATTCAACCAGCCGTCATTGGTAAATCAGTTTCCGATCAAGCTGCTATCGA
TAAATTAATGATCGATCTCGATGGTACCCCAAATAAAGGTAAATTAGGTGCCAACGCTAT
CCTTGCAGTCAGTTTAGCTGTTTGCAGAGCTGGTGCTGCTGATAGAAATTTACCACTTTA
CAAATATATCTCAGAAATTGCAGGTACTAAAATGAGATTACCAGTTCCAGCATTCAATGT
TATCAATGGTGGTTCACATGCAGGTAATAAATTAGCTATGCAAGAATTTATGATTTTACC
AGTTGGTGCTAAAGATTTCAATGAAGCCTATCGTATGGGTTCAGAAGTTTATCATAACTT
AAAGAATGTCATCAGTGGTAGATAC----------
Length of 5' end seq. 625
3' end seq. ID -
3' end seq. -
Length of 3' end seq. -
Connected seq. ID -
Connected seq. -
Length of connected seq. -
Full length Seq ID -
Full length Seq. -
Length of full length seq. -