SLC124
Library SL
(Link to library)
Clone ID SLC124
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U15154-1
Original site URL
Representative seq. ID SLC124Z
(Link to Original site)
Representative DNA sequence
>SLC124 (SLC124Q) /CSM/SL/SLC1-A/SLC124Q.Seq.d/
XXXXXXXXXXCCAATTTAGGTGCTGCCAACAATTTCAAAATCGCTCACTTCCAAACTGAA
GAAATGAAAGCAATTGTCAACTCTGCTCAATTCTTTTATTTAGTTGGTTACTTTTTAACC
GTTTCACCAGACTCTGCTGTTCACTTGGGTAAACACGCCGCTGAAAATGATAAACCATTC
CTCTACGGTTTAGCCGCTCCATTCTTAATTGATTTCTTCTTTGATAAAGTTTCTGAACTC
CTCCCATACGTTGATATCGTTTTTGCCAATGAAAGTGAAGCCGCCACTCTTGGTCGTAAA
ATGAACTGGGGTGAAGATTTAACCGTCATCGCTGAAAAATTAGCCGCTTGGGAAAAAGTT
AACACCAAACGTACTCGTACCGTCGTTTTCACCCAAGGTCCAGATGCCACTCTTGTCTTC
CAAAATGGTGTTTTAACAAAATACAACCCAATCAAAGTTGCCACTGAAGATATCCTCGAT
TTAAACGCTGCTGGTGATTCATTCTGTGGTGGTTTCCTTGCCGCTTACTCCAATGGTCAA
GAAATCGCCAAATGTGTCGAAGCTGGTCACTATGCCTCTTGGGAAATTATTAGACAAAAT
GGNGCCACCGTCCCAGCCAGTGAACCAAAAATCCAATTCTAAAATAAATTTTATTAAAAT
ATATAATT
sequence update 1998. 4.22
Translated Amino Acid sequence
---NLGAANNFKIAHFQTEEMKAIVNSAQFFYLVGYFLTVSPDSAVHLGKHAAENDKPFL
YGLAAPFLIDFFFDKVSELLPYVDIVFANESEAATLGRKMNWGEDLTVIAEKLAAWEKVN
TKRTRTVVFTQGPDATLVFQNGVLTKYNPIKVATEDILDLNAAGDSFCGGFLAAYSNGQE
IAKCVEAGHYASWEIIRQNGATVPASEPKIQF*nkfy*ni*


Translated Amino Acid sequence (All Frames)
Frame A:
---qfrccqqfqnrslpn*rnesncqlcsillfswllfnrftrlccslg*trr*k**tip
lrfsrsiln*fll**sf*tppir*yrfcq*k*srhsws*nelg*rfnrhr*kisrlgks*
hqtysyrrfhprsrchsclpkwcfnkiqpnqsch*ryprfkrcw*filwwfpcrllqwsr
nrqmcrswslcllgny*tkwxhrpsq*tknpilk*illkyii


Frame B:
---NLGAANNFKIAHFQTEEMKAIVNSAQFFYLVGYFLTVSPDSAVHLGKHAAENDKPFL
YGLAAPFLIDFFFDKVSELLPYVDIVFANESEAATLGRKMNWGEDLTVIAEKLAAWEKVN
TKRTRTVVFTQGPDATLVFQNGVLTKYNPIKVATEDILDLNAAGDSFCGGFLAAYSNGQE
IAKCVEAGHYASWEIIRQNGATVPASEPKIQF*nkfy*ni*


Frame C:
---i*vlptisksltsklkk*kqlstllnsfi*lvtf*pfhqtllftwvntplkminhss
tv*plhs*lisslikflnsshtlisflpmkvkppllvvk*tgvki*psslkn*plgkklt
pnvlvpsfspkvqmpllsskmvf*qnttqsklplkissi*tllvihsvvvslpltpmvkk
spnvsklvtmplgklldkmxppsqpvnqksnskinfikiyn


Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

SLC124 (SLC124Q) /CSM/SL/SLC1-A/SLC124Q.Seq.d/ 1298 0.0
VFN258 (VFN258Q) /CSM/VF/VFN2-C/VFN258Q.Seq.d/ 1267 0.0
VFK730 (VFK730Q) /CSM/VF/VFK7-B/VFK730Q.Seq.d/ 1267 0.0
VFE801 (VFE801Q) /CSM/VF/VFE8-A/VFE801Q.Seq.d/ 1267 0.0
VFD787 (VFD787Q) /CSM/VF/VFD7-D/VFD787Q.Seq.d/ 1267 0.0
VFB633 (VFB633Q) /CSM/VF/VFB6-B/VFB633Q.Seq.d/ 1267 0.0
VFK886 (VFK886Q) /CSM/VF/VFK8-D/VFK886Q.Seq.d/ 1263 0.0
VFH755 (VFH755Q) /CSM/VF/VFH7-C/VFH755Q.Seq.d/ 1259 0.0
VFB669 (VFB669Q) /CSM/VF/VFB6-C/VFB669Q.Seq.d/ 1257 0.0
VFN293 (VFN293Q) /CSM/VF/VFN2-D/VFN293Q.Seq.d/ 1251 0.0

own update 2001.12. 3
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

(AU034164) Dictyostelium discoideum slug cDNA, clone SLC124. 1298 0.0 1
(BJ434430) Dictyostelium discoideum cDNA clone:ddv16h21, 3' ... 1205 0.0 2
(BJ435561) Dictyostelium discoideum cDNA clone:ddv27c16, 3' ... 1203 0.0 2
(BJ433778) Dictyostelium discoideum cDNA clone:ddv22l22, 3' ... 1203 0.0 2
(BJ433607) Dictyostelium discoideum cDNA clone:ddv22l07, 3' ... 1203 0.0 2
(BJ429706) Dictyostelium discoideum cDNA clone:ddv4i18, 3' e... 1203 0.0 2
(BJ429617) Dictyostelium discoideum cDNA clone:ddv4a10, 3' e... 1203 0.0 2
(BJ430822) Dictyostelium discoideum cDNA clone:ddv8n21, 3' e... 1197 0.0 2
(BJ435675) Dictyostelium discoideum cDNA clone:ddv27i24, 3' ... 1187 0.0 2
(BJ429205) Dictyostelium discoideum cDNA clone:ddv2o14, 3' e... 1136 0.0 3
dna update 2009. 2.21
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(O49923) RecName: Full=Adenosine kinase; Short=AK; ... 183 4e-45
(P78825) RecName: Full=Adenosine kinase; EC=2.7.1.20; ... 179 5e-44
D89173_1(D89173|pid:none) Schizosaccharomyces pombe mRNA, partia... 179 5e-44
CR954210_348(CR954210|pid:none) Ostreococcus tauri strain OTTH05... 174 2e-42
BT043709_1(BT043709|pid:none) Salmo salar clone HM5_2665 adenosi... 174 2e-42
BC081712_1(BC081712|pid:none) Rattus norvegicus adenosine kinase... 173 4e-42
(Q64640) RecName: Full=Adenosine kinase; Short=AK; ... 173 4e-42
(P55264) RecName: Full=Adenosine kinase; Short=AK; ... 172 6e-42
CP001328_106(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 171 2e-41
U57042_1(U57042|pid:none) Rattus norvegicus adenosine kinase mRN... 171 2e-41
protein update 2009. 6. 1
PSORT

psg: 0.61 gvh: 0.56 alm: 0.39 top: 0.53 tms: 0.00 mit: 0.26 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: cytoplasmic
36.0 %: nuclear
8.0 %: mitochondrial
8.0 %: peroxisomal
4.0 %: extracellular, including cell wall

>> prediction for SLC124 is cyt

5' end seq. ID -
5' end seq. -
Length of 5' end seq. -
3' end seq. ID SLC124Z
3' end seq.
>SLC124Z.Seq
----------CCAATTTAGGTGCTGCCAACAATTTCAAAATCGCTCACTTCCAAACTGAA
GAAATGAAAGCAATTGTCAACTCTGCTCAATTCTTTTATTTAGTTGGTTACTTTTTAACC
GTTTCACCAGACTCTGCTGTTCACTTGGGTAAACACGCCGCTGAAAATGATAAACCATTC
CTCTACGGTTTAGCCGCTCCATTCTTAATTGATTTCTTCTTTGATAAAGTTTCTGAACTC
CTCCCATACGTTGATATCGTTTTTGCCAATGAAAGTGAAGCCGCCACTCTTGGTCGTAAA
ATGAACTGGGGTGAAGATTTAACCGTCATCGCTGAAAAATTAGCCGCTTGGGAAAAAGTT
AACACCAAACGTACTCGTACCGTCGTTTTCACCCAAGGTCCAGATGCCACTCTTGTCTTC
CAAAATGGTGTTTTAACAAAATACAACCCAATCAAAGTTGCCACTGAAGATATCCTCGAT
TTAAACGCTGCTGGTGATTCATTCTGTGGTGGTTTCCTTGCCGCTTACTCCAATGGTCAA
GAAATCGCCAAATGTGTCGAAGCTGGTCACTATGCCTCTTGGGAAATTATTAGACAAAAT
GGNGCCACCGTCCCAGCCAGTGAACCAAAAATCCAATTCTAAAATAAATTTTATTAAAAT
ATATAATT
Length of 3' end seq. 658
Connected seq. ID -
Connected seq. -
Length of connected seq. -
Full length Seq ID -
Full length Seq. -
Length of full length seq. -