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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
SLB151
Library SL
(Link to library)
Clone ID SLB151
Atlas ID -
NBRP ID
dictyBase ID
Link to Contig Contig-U15440-1
Original site URL
Representative seq. ID SLB151E
(Link to Original site)
Representative DNA sequence 
>SLB151 (SLB151Q) /CSM/SL/SLB1-C/SLB151Q.Seq.d/
CAACAATAAAAATGGAAGAAGTATTAAAATATTTTAGACGTATTTCATCAATTATTATAC
TTTTAGTTTCATCAGTGTATGCAGCAACATTTTTAATGTTTCCTGTGATTGCATTGATTG
AACCATTTTATAAAAAGTTAGCATTCAAATTACAAGCTAAAATCGCATCGGGATGGTTTA
GATTGGTTTTATTTGTTTTCGAAGTTCTCAATGGTATAGAAATTAGATATTATGGTGAAG
ATGATATTCAAGAAGGTGAATCAATCATTATGATGATGAATCATCCATCAGAAATTGATT
GGTTATTCTCTTTTAGTATTGCACAAAGAAAGAAAGCTTTATCAAATATTAAGGTTTTAT
TGAAAAATGAAGTAAGATTTGTACCAGGTGTTGGTTGGGGATGTGATAATTTAGATTACA
TCTTTTTAACAAGAGATTGGACATTCGATGAAAATCATATTGAATATAAAATTAATAAAT
AAAGAAAGTGAATGTAAACCATGGTTAGTTATTTTCCCAGAGGGTACCGATATTGATGAT
GTTAAATTAAAAAAAAGTTGGGATTTTGCAGAAAAGAATGGATTCCCAAAATTTAATAAT
GTACTTTTACCAAGNCATAAAGGTTTACATGCATGTGTTGAACCATTAAGAGATACAATT
GATTGTGTATATGATTTNACCAATCGGTTATGAAGGTAAACCAACCATTTTATCATGTAT
TAGTGGAACAAGTCCAAGAGTTGTAAATATTCATATTAAGAGATATTCACTTGATGAAAT
TCCAAAGGATGAAAACCAACTTCAAAAATGGTTATTTAATCGTTATCATGAAAAAGNTCA
AATGTTACAATACTTAAAAGAAAATAAAACTTATTCAATGCCATATAGAATTCATAAACC
TTCATTATCAATTTATGCATCAGCATTTTTATGGTTTTATTACTTTATGTTACCAATCAC
CAATTTACTTTTAATTTCTTCATTTACAAGAGTGTACTTTATCATAGCATTTGTTTATCA
CATTTTAAATTCAAAATATGAACCACTTCGTAAATTAAGAGGATTACAAAATGCAATTTA
TTCAAAAAAAGAAAAATCTCATTAAATAAATAAATATTGATTTGGAAATTAGGATTTTGT
TTAGATAAAAAAAAAAAAAATAAAAATAAAAATCAAACCTTATCACTACCGAAAAAAAAA
AAAAAA
sequence update 1999. 6.18
Translated Amino Acid sequence 
TIKMEEVLKYFRRISSIIILLVSSVYAATFLMFPVIALIEPFYKKLAFKLQAKIASGWFR
LVLFVFEVLNGIEIRYYGEDDIQEGESIIMMMNHPSEIDWLFSFSIAQRKKALSNIKVLL
KNEVRFVPGVGWGCDNLDYIFLTRDWTFDENHIEYKINK*rk*m*tmvsyfprgyry**c
*ikkklgfcrkewipki**ctftkx*rftcmc*tikryn*lci*fxqsvmkvnqpfyhvl
veqvqel*ifilrdihlmkfqrmktnfkngylivimkkxkcynt*kkikliqchiefinl
hyqfmhqhfygfitlcyqspiyf*flhlqectls*hlfitf*iqnmnhfvn*edykmqfi
qkkknlik*inidleirilfr*kkkk*k*ksnlittekkkk
Translated Amino Acid sequence (All Frames) 
Frame A:
qq*kwkky*nildvfhqllyf*fhqcmqqhf*cfl*lh*lnhfiks*hsnyklkshrdgl
dwfylfskfsmv*kldimvkmifkkvnqsl***iihqkligysllvlhkerklyqilrfy
*kmk*dlyqvlvgdvii*itsf*qeighsmkiilniklinkeseckpwlvifpegtdidd
vklkkswdfaekngfpkfnnvllpxhkglhacveplrdtidcvydxtnrl*r*tnhfimy
*wnksksckysy*eift**nskg*kptskmvi*sls*kxsnvtilkrk*nlfnai*ns*t
fiinlcisifmvlllyvtnhqftfnffiyksvlyhsiclshfkfki*tts*ikritkcnl
fkkrkislnk*iliwklgfcldkkkknknknqtlslpkkkkk


Frame B:
nnkngrsikif*tyfinyytfsfisvcsnifnvscdcid*til*kvsiqits*nrigmv*
igficfrssqwyrn*ilw*r*ysrr*inhyddessirn*lvilf*yctkkesfiky*gfi
ek*skictrcwlgm**frlhlfnkrldir*ksy*i*n**ikkvnvnhg*lfsqrvpilmm
ln*kkvgilqkrmdsqnlimyfyqxikvymhvlnh*eiqlivymixpigyegkptilsci
sgtsprvvnihikrysldeipkdenqlqkwlfnryhekxqmlqylkenktysmpyrihkp
slsiyasaflwfyyfmlpitnlllissftrvyfiiafvyhilnskyeplrklrglqnaiy
skkeksh*inky*fgn*dfv*ikkkkikikikpyhyrkkkk


Frame C:
TIKMEEVLKYFRRISSIIILLVSSVYAATFLMFPVIALIEPFYKKLAFKLQAKIASGWFR
LVLFVFEVLNGIEIRYYGEDDIQEGESIIMMMNHPSEIDWLFSFSIAQRKKALSNIKVLL
KNEVRFVPGVGWGCDNLDYIFLTRDWTFDENHIEYKINK*rk*m*tmvsyfprgyry**c
*ikkklgfcrkewipki**ctftkx*rftcmc*tikryn*lci*fxqsvmkvnqpfyhvl
veqvqel*ifilrdihlmkfqrmktnfkngylivimkkxkcynt*kkikliqchiefinl
hyqfmhqhfygfitlcyqspiyf*flhlqectls*hlfitf*iqnmnhfvn*edykmqfi
qkkknlik*inidleirilfr*kkkk*k*ksnlittekkkk
Homology vs CSM-cDNA 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLB151 (SLB151Q) /CSM/SL/SLB1-C/SLB151Q.Seq.d/                       2081   0.0
VFH691 (VFH691Q) /CSM/VF/VFH6-D/VFH691Q.Seq.d/                       1055   0.0
VFM709 (VFM709Q) /CSM/VF/VFM7-A/VFM709Q.Seq.d/                       1039   0.0
VFE395 (VFE395Q) /CSM/VF/VFE3-D/VFE395Q.Seq.d/                       1005   0.0
FCL-AD10 (FCL-AD10Q) /CSM/FCL/FCL-AD/FCL-AD10Q.Seq.d/                 957   0.0
SSD878 (SSD878Q) /CSM/SS/SSD8-D/SSD878Q.Seq.d/                        507   e-142
SSD862 (SSD862Q) /CSM/SS/SSD8-C/SSD862Q.Seq.d/                        416   e-115
SFJ528 (SFJ528Q) /CSM/SF/SFJ5-B/SFJ528Q.Seq.d/                        258   2e-67
VSD635 (VSD635Q) /CSM/VS/VSD6-B/VSD635Q.Seq.d/                         40   0.077
SHF566 (SHF566Q) /CSM/SH/SHF5-C/SHF566Q.Seq.d/                         40   0.077
own update 2004.12.25
Homology vs DNA 

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU060695) Dictyostelium discoideum slug cDNA, clone SLB151.     1086   0.0    2
(AU033544) Dictyostelium discoideum slug cDNA, clone SLB151.      793   0.0    3
(BJ434417) Dictyostelium discoideum cDNA clone:ddv16e24, 3' ...   668   0.0    4
(BJ435078) Dictyostelium discoideum cDNA clone:ddv26b03, 3' ...   636   0.0    4
(BJ431120) Dictyostelium discoideum cDNA clone:ddv9n23, 3' e...   559   0.0    4
(C92337) Dictyostelium discoideum slug cDNA, clone SSD878.        507   e-162  2
(AU072263) Dictyostelium discoideum slug cDNA, clone SSD862.      408   e-109  1
(BJ402058) Dictyostelium discoideum cDNA clone:dds20g07, 3' ...   258   4e-64  1
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    32   5e-04  24
(CJ454901) Macaca fascicularis mRNA, clone: QflA-20661, 5' e...    44   8e-04  3
dna update 2009. 1.30
Homology vs Protein 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM451880_2(AM451880|pid:none) Vitis vinifera contig VV78X180097....    73   4e-33
AK103516_1(AK103516|pid:none) Oryza sativa Japonica Group cDNA c...    65   3e-29
AP003368_18(AP003368|pid:none) Oryza sativa Japonica Group genom...    65   3e-29
BT060863_1(BT060863|pid:none) Zea mays full-length cDNA clone ZM...    65   4e-28
(Q8L4Y2) RecName: Full=Probable 1-acyl-sn-glycerol-3-phosphate a...    66   4e-28
AC008263_2(AC008263|pid:none) Arabidopsis thaliana chromosome 1 ...    66   4e-28
EU963283_1(EU963283|pid:none) Zea mays clone 260373 unknown mRNA.      65   4e-28
AK144580_1(AK144580|pid:none) Mus musculus lung RCB-0558 LLC cDN...    71   1e-25
(Q6NYV8) RecName: Full=Lysocardiolipin acyltransferase;         ...    66   3e-24
BT063406_1(BT063406|pid:none) Zea mays full-length cDNA clone ZM...    68   6e-24
protein update 2009. 7. 4
PSORT 

 psg: 0.61  gvh: 0.67  alm: 0.23  top: 0.53  tms: 0.07  mit: 0.18  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.29  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 20.0 %: cytoplasmic
	 16.0 %: Golgi
	 16.0 %: nuclear
	 16.0 %: endoplasmic reticulum
	 16.0 %: mitochondrial
	  4.0 %: peroxisomal
	  4.0 %: vacuolar
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for SLB151 is cyt
5' end seq. ID SLB151F
5' end seq. 
>SLB151F.Seq
CAACAATAAAAATGGAAGAAGTATTAAAATATTTTAGACGTATTTCATCAATTATTATAC
TTTTAGTTTCATCAGTGTATGCAGCAACATTTTTAATGTTTCCTGTGATTGCATTGATTG
AACCATTTTATAAAAAGTTAGCATTCAAATTACAAGCTAAAATCGCATCGGGATGGTTTA
GATTGGTTTTATTTGTTTTCGAAGTTCTCAATGGTATAGAAATTAGATATTATGGTGAAG
ATGATATTCAAGAAGGTGAATCAATCATTATGATGATGAATCATCCATCAGAAATTGATT
GGTTATTCTCTTTTAGTATTGCACAAAGAAAGAAAGCTTTATCAAATATTAAGGTTTTAT
TGAAAAATGAAGTAAGATTTGTACCAGGTGTTGGTTGGGGATGTGATAATTTAGATTACA
TCTTTTTAACAAGAGATTGGACATTCGATGAAAATCATATTGAATATAAAATTAATAAAT
AAAGAAAGTGAATGTAAACCATGGTTAGTTATTTTCCCAGAGGGTACCGATATTGATGAT
GTTAAATTAAAAAAAAGTTGGGATTTTGCAGAAAAGAATGGATTCCCAAAATTTAATAAT
GTACTTTTACCAAGACATAAAGGTTTACATGCATGTGTTGAACCATTAAGAGATACAATT
GATTGTGTATATGATTTAACCAATCGGTTATGAAGGTAAACCAA----------
Length of 5' end seq. 704
3' end seq. ID SLB151Z
3' end seq. 
>SLB151Z.Seq
----------AAAAAGTTGGGATTTTGCAGAAAAGAATGGATTCCCAAAATTTAATAATG
TACTTTTACCAAGGCATAAAGGTTTACATGCATGTGTTGAACCATTAAGAGATACAATTG
ATTGTGTATATGATTTCACAATCGGTTATGAAGGTAAACCAACCATTTTATCATGTATTA
GTGGAACAAGTCCAAGAGTTGTAAATATTCATATTAAGAGATATTCACTTGATGAAATTC
CAAAGGATGAAAACCAACTTCAAAAATGGTTATTTAATCGTTATCATGAAAAAGNTCAAA
TGTTACAATACTTAAAAGAAAATAAAACTTATTCAATGCCATATAGAATTCATAAACCTT
CATTATCAATTTATGCATCAGCATTTTTATGGTTTTATTACTTTATGTTACCAATCACCA
ATTTACTTTTAATTTCTTCATTTACAAGAGTGTACTTTATCATAGCATTTGTTTATCACA
TTTTAAATTCAAAATATGAACCACTTCGTAAATTAAGAGGATTACAAAATGCAATTTATT
CAAAAAAAGAAAAATCTCATTAAATAAATAAATATTGATTTGGAAATTAGGATTTTGTTT
AGATAAAAAAAAAAAAAATAAAAATAAAAATCAAACCTTATCACTACCGAAAAAAAAAAA
AAAA
Length of 3' end seq. 654
Connected seq. ID SLB151P
Connected seq. 
>SLB151P.Seq
CAACAATAAAAATGGAAGAAGTATTAAAATATTTTAGACGTATTTCATCAATTATTATAC
TTTTAGTTTCATCAGTGTATGCAGCAACATTTTTAATGTTTCCTGTGATTGCATTGATTG
AACCATTTTATAAAAAGTTAGCATTCAAATTACAAGCTAAAATCGCATCGGGATGGTTTA
GATTGGTTTTATTTGTTTTCGAAGTTCTCAATGGTATAGAAATTAGATATTATGGTGAAG
ATGATATTCAAGAAGGTGAATCAATCATTATGATGATGAATCATCCATCAGAAATTGATT
GGTTATTCTCTTTTAGTATTGCACAAAGAAAGAAAGCTTTATCAAATATTAAGGTTTTAT
TGAAAAATGAAGTAAGATTTGTACCAGGTGTTGGTTGGGGATGTGATAATTTAGATTACA
TCTTTTTAACAAGAGATTGGACATTCGATGAAAATCATATTGAATATAAAATTAATAAAT
AAAGAAAGTGAATGTAAACCATGGTTAGTTATTTTCCCAGAGGGTACCGATATTGATGAT
GTTAAATTAAAAAAAAGTTGGGATTTTGCAGAAAAGAATGGATTCCCAAAATTTAATAAT
GTACTTTTACCAAGACATAAAGGTTTACATGCATGTGTTGAACCATTAAGAGATACAATT
GATTGTGTATATGATTTAACCAATCGGTTATGAAGGTAAACCAA----------AAAAAG
TTGGGATTTTGCAGAAAAGAATGGATTCCCAAAATTTAATAATGTACTTTTACCAAGGCA
TAAAGGTTTACATGCATGTGTTGAACCATTAAGAGATACAATTGATTGTGTATATGATTT
CACAATCGGTTATGAAGGTAAACCAACCATTTTATCATGTATTAGTGGAACAAGTCCAAG
AGTTGTAAATATTCATATTAAGAGATATTCACTTGATGAAATTCCAAAGGATGAAAACCA
ACTTCAAAAATGGTTATTTAATCGTTATCATGAAAAAGNTCAAATGTTACAATACTTAAA
AGAAAATAAAACTTATTCAATGCCATATAGAATTCATAAACCTTCATTATCAATTTATGC
ATCAGCATTTTTATGGTTTTATTACTTTATGTTACCAATCACCAATTTACTTTTAATTTC
TTCATTTACAAGAGTGTACTTTATCATAGCATTTGTTTATCACATTTTAAATTCAAAATA
TGAACCACTTCGTAAATTAAGAGGATTACAAAATGCAATTTATTCAAAAAAAGAAAAATC
TCATTAAATAAATAAATATTGATTTGGAAATTAGGATTTTGTTTAGATAAAAAAAAAAAA
AATAAAAATAAAAATCAAACCTTATCACTACCGAAAAAAAAAAAAAAA
Length of connected seq. 1358
Full length Seq ID SLB151E
Full length Seq. 
>SLB151E.Seq
CAACAATAAAAATGGAAGAAGTATTAAAATATTTTAGACGTATTTCATCAATTATTATAC
TTTTAGTTTCATCAGTGTATGCAGCAACATTTTTAATGTTTCCTGTGATTGCATTGATTG
AACCATTTTATAAAAAGTTAGCATTCAAATTACAAGCTAAAATCGCATCGGGATGGTTTA
GATTGGTTTTATTTGTTTTCGAAGTTCTCAATGGTATAGAAATTAGATATTATGGTGAAG
ATGATATTCAAGAAGGTGAATCAATCATTATGATGATGAATCATCCATCAGAAATTGATT
GGTTATTCTCTTTTAGTATTGCACAAAGAAAGAAAGCTTTATCAAATATTAAGGTTTTAT
TGAAAAATGAAGTAAGATTTGTACCAGGTGTTGGTTGGGGATGTGATAATTTAGATTACA
TCTTTTTAACAAGAGATTGGACATTCGATGAAAATCATATTGAATATAAAATTAATAAAT
AAAGAAAGTGAATGTAAACCATGGTTAGTTATTTTCCCAGAGGGTACCGATATTGATGAT
GTTAAATTAAAAAAAAGTTGGGATTTTGCAGAAAAGAATGGATTCCCAAAATTTAATAAT
GTACTTTTACCAAGNCATAAAGGTTTACATGCATGTGTTGAACCATTAAGAGATACAATT
GATTGTGTATATGATTTNACCAATCGGTTATGAAGGTAAACCAACCATTTTATCATGTAT
TAGTGGAACAAGTCCAAGAGTTGTAAATATTCATATTAAGAGATATTCACTTGATGAAAT
TCCAAAGGATGAAAACCAACTTCAAAAATGGTTATTTAATCGTTATCATGAAAAAGNTCA
AATGTTACAATACTTAAAAGAAAATAAAACTTATTCAATGCCATATAGAATTCATAAACC
TTCATTATCAATTTATGCATCAGCATTTTTATGGTTTTATTACTTTATGTTACCAATCAC
CAATTTACTTTTAATTTCTTCATTTACAAGAGTGTACTTTATCATAGCATTTGTTTATCA
CATTTTAAATTCAAAATATGAACCACTTCGTAAATTAAGAGGATTACAAAATGCAATTTA
TTCAAAAAAAGAAAAATCTCATTAAATAAATAAATATTGATTTGGAAATTAGGATTTTGT
TTAGATAAAAAAAAAAAAAATAAAAATAAAAATCAAACCTTATCACTACCGAAAAAAAAA
AAAAAA
Length of full length seq. 1206