>SLB125 (SLB125Q) /CSM/SL/SLB1-B/SLB125Q.Seq.d/
XXXXXXXXXXAAACGTCCACACGATAACCATTACGTATTCCATTACAAGATGTCTACAAG
ATCGGTGGTATCGGTACTGTTCCAGTAGGTCGTGTCGAAACTGGTATCATTAAACCAGGT
ATGGTCGTCACCTTTGCCCCAGCTGGTCTCTCAACTGAAGTCAAATCAGTCGAAATGCAT
CACGAACAACTCCCAGAAGCCCGTCCAGGTGACAATGTAGGTTTCAACGTTAAAAACGTT
TCAGTCAAAGAAATTAAAAGAGGTATGGTCGCTGGTGACTCCAAAAACGATCCACCACAA
GAAACTGAAAAATTCGTTGCTCAAGTTATCGTCCTCAACCATCCAGGTCAAATCCATGCT
GGTTACTCACCAGTCTTAGATTGTCACACTGCTCACATTGCCTGTAAATTCACTGAAATC
GTCGATAAAGTTGATCGTCGTACTGGTGCCGTCGTTGCCAAAGAAGGTACTGCCGCCGTC
GTCTTAAAGAATGGTGATGCCGCTATGGTCGAATTAACCCCATCTCGTCCAATGTGTGTT
GAATCCTTCACTGAATACCCACCATTAGGTCGTTTCGCCGTCAGAGATATGAGACAAACC
GTCGCCGTCGGTGTCATCAAATCAACCGTCAAGAAAGCCCCAGGTAAAGCCGGTGATAAG
AAAGGTGCTGCTGCCCCATCAAAAAAGAAATAAATAAATAATATTTCTTAATAAATAGCA
TTTTATAATAATTTTAAAAA

---tstr*PLRIPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPAGLSTEVKSVEMHH
EQLPEARPGDNVGFNVKNVSVKEIKRGMVAGDSKNDPPQETEKFVAQVIVLNHPGQIHAG
YSPVLDCHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELTPSRPMCVE
SFTEYPPLGRFAVRDMRQTVAVGVIKSTVKKAPGKAGDKKGAAAPSKKK*innis**iaf
ynnfk

Frame A:
---nvhtititysitrclqdrwyrycssrscrnwyh*trygrhlcpswsln*sqisrnas
rttprspsr*qcrfqr*krfsqrn*krygrw*lqkrsttrn*kircssyrpqpsrsnpcw
lltslrlshcshcl*ih*nrr*s*ssywcrrcqrrycrrrlkew*crygrinpissnvc*
ilh*iptirsfrrqryetnrrrrchqinrqespr*sr**ercccpikkeink*yflinsi
l**f*k


Frame B:
---tstr*PLRIPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPAGLSTEVKSVEMHH
EQLPEARPGDNVGFNVKNVSVKEIKRGMVAGDSKNDPPQETEKFVAQVIVLNHPGQIHAG
YSPVLDCHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELTPSRPMCVE
SFTEYPPLGRFAVRDMRQTVAVGVIKSTVKKAPGKAGDKKGAAAPSKKK*innis**iaf
ynnfk


Frame C:
---rphdnhyvfhykmstrsvvsvlfq*vvsklvslnqvwssplpqlvsqlksnqskcit
nnsqkpvqvtm*vstlktfqskklkevwslvtpktihhkklknsllklssstiqvksmlv
thqs*ivtlltlpvnslkssiklivvlvpslpkkvlppss*rmvmplwsn*phlvqcvln
pslnthh*vvspsei*dkpspsvssnqpsrkpqvkpvirkvllphqkrnk*iiflnk*hf
iiilk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLB125 (SLB125Q) /CSM/SL/SLB1-B/SLB125Q.Seq.d/                       1328   0.0
SLA488 (SLA488Q) /CSM/SL/SLA4-D/SLA488Q.Seq.d/                       1326   0.0
VFO616 (VFO616Q) /CSM/VF/VFO6-A/VFO616Q.Seq.d/                       1314   0.0
VFN376 (VFN376Q) /CSM/VF/VFN3-D/VFN376Q.Seq.d/                       1314   0.0
VFN329 (VFN329Q) /CSM/VF/VFN3-B/VFN329Q.Seq.d/                       1314   0.0
VFN318 (VFN318Q) /CSM/VF/VFN3-A/VFN318Q.Seq.d/                       1314   0.0
VFN174 (VFN174Q) /CSM/VF/VFN1-D/VFN174Q.Seq.d/                       1314   0.0
VFM841 (VFM841Q) /CSM/VF/VFM8-B/VFM841Q.Seq.d/                       1314   0.0
VFM534 (VFM534Q) /CSM/VF/VFM5-B/VFM534Q.Seq.d/                       1314   0.0
VFM190 (VFM190Q) /CSM/VF/VFM1-D/VFM190Q.Seq.d/                       1314   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU033520) Dictyostelium discoideum slug cDNA, clone SLB125.     1328   0.0    1
(AU052275) Dictyostelium discoideum slug cDNA, clone SLA488.     1326   0.0    1
(AU033632) Dictyostelium discoideum slug cDNA, clone SLB249.     1300   0.0    1
(X55973) D. discoideum EF1-I gene for elongation factor 1 al...  1298   0.0    2
(AU264497) Dictyostelium discoideum vegetative cDNA clone:VS...  1298   0.0    1
(AU263935) Dictyostelium discoideum vegetative cDNA clone:VS...  1298   0.0    1
(AU052219) Dictyostelium discoideum slug cDNA, clone SLA265.     1298   0.0    2
(AU039993) Dictyostelium discoideum slug cDNA, clone SLH395.     1298   0.0    2
(AU039527) Dictyostelium discoideum slug cDNA, clone SLE701.     1298   0.0    2
(AU039519) Dictyostelium discoideum slug cDNA, clone SLA776.     1298   0.0    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X55973_1(X55973|pid:none) D. discoideum EF1-I gene for elongatio...   403   e-111
X55972_1(X55972|pid:none) D. discoideum EF1-II gene for elongati...   403   e-111
(P18624) RecName: Full=Elongation factor 1-alpha;          Short...   403   e-111
AY542532_1(AY542532|pid:none) Cladonema radiatum translation elo...   325   1e-87
(P41745) RecName: Full=Elongation factor 1-alpha;          Short...   323   3e-87
AY643816_1(AY643816|pid:none) Lycogala epidendrum elongation fac...   322   1e-86
Y09023_1(Y09023|pid:none) G.cydonium mRNA for elongation factor ...   321   1e-86
AY643820_1(AY643820|pid:none) Arcyria denudata elongation factor...   321   2e-86
AJ581004_1(AJ581004|pid:none) Axinella verrucosa mRNA for elonga...   321   2e-86
AY582829_1(AY582829|pid:none) Acanthamoeba culbertsoni ef1a gene...   321   2e-86

 psg: 0.89  gvh: 0.50  alm: 0.42  top: 0.47  tms: 0.00  mit: 0.25  mip: 0.05
 nuc: 0.00  erl: 0.00  erm: 0.60  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: nuclear
	 32.0 %: cytoplasmic
	 20.0 %: mitochondrial
	  8.0 %: vacuolar
	  4.0 %: endoplasmic reticulum

>> prediction for SLB125 is nuc

>SLB125Z.Seq
----------AAACGTCCACACGATAACCATTACGTATTCCATTACAAGATGTCTACAAG
ATCGGTGGTATCGGTACTGTTCCAGTAGGTCGTGTCGAAACTGGTATCATTAAACCAGGT
ATGGTCGTCACCTTTGCCCCAGCTGGTCTCTCAACTGAAGTCAAATCAGTCGAAATGCAT
CACGAACAACTCCCAGAAGCCCGTCCAGGTGACAATGTAGGTTTCAACGTTAAAAACGTT
TCAGTCAAAGAAATTAAAAGAGGTATGGTCGCTGGTGACTCCAAAAACGATCCACCACAA
GAAACTGAAAAATTCGTTGCTCAAGTTATCGTCCTCAACCATCCAGGTCAAATCCATGCT
GGTTACTCACCAGTCTTAGATTGTCACACTGCTCACATTGCCTGTAAATTCACTGAAATC
GTCGATAAAGTTGATCGTCGTACTGGTGCCGTCGTTGCCAAAGAAGGTACTGCCGCCGTC
GTCTTAAAGAATGGTGATGCCGCTATGGTCGAATTAACCCCATCTCGTCCAATGTGTGTT
GAATCCTTCACTGAATACCCACCATTAGGTCGTTTCGCCGTCAGAGATATGAGACAAACC
GTCGCCGTCGGTGTCATCAAATCAACCGTCAAGAAAGCCCCAGGTAAAGCCGGTGATAAG
AAAGGTGCTGCTGCCCCATCAAAAAAGAAATAAATAAATAATATTTCTTAATAAATAGCA
TTTTATAATAATTTTAAAAA