>SLA594 (SLA594Q) /CSM/SL/SLA5-D/SLA594Q.Seq.d/
AACAATAATATGTTAAAAAATTTAGATTTTAATAGTAACGATCACTCTAAATTGGATAAT
ATTTTATTAAGCGAAAAATCAATCGAAAGACACAGAAATCCATTATCATCTTCTATTTCA
TCAGCACCAAAACCATTGGATTTTGATAGTGATGAAGATATAACAGAAGAATATTATAAA
AAAATGTTAGCTAATCATGCAAGATCAAAGAAATCTAAAAAAGAAACTGATAAAATATTT
AGAGAATTGGAACTATCTGATGATGATGTTTTTGATGAAAAGAATGATAGAAAACAATTA
AAAATGATGAAAAGGTTAATGGATAGAGAGGATAATGATAGAAGAGTAAAAAAGAAAATG
GTTGATCCAAAATATAATAGTAGTAGTAGTAGATCAAAAGATAGATATGGAAGTAGTAGT
AGTAGTAAATCATCAAAATATAATTCATCCTCATCATCATCATCTTCAAGATCAAAAGAT
AATAAGTATATAAGACCATCAATTTTCTCAAGTGATGATGATTTTTCAAAGGATGAAGAT
GATGAAGAATTTGAAAGACTATGGCAAGATAGACAGACAAAGAAATCAAGTAATGGACCA
AGTTTGTCAAATTCATATTCTGGTATTAACACAGATCAATATAATCAACAACAACAATAT
AATCAACAACAACAACAATATCAATCACAAAATCXXXXXXXXXX

NNNMLKNLDFNSNDHSKLDNILLSEKSIERHRNPLSSSISSAPKPLDFDSDEDITEEYYK
KMLANHARSKKSKKETDKIFRELELSDDDVFDEKNDRKQLKMMKRLMDREDNDRRVKKKM
VDPKYNSSSSRSKDRYGSSSSSKSSKYNSSSSSSSSRSKDNKYIRPSIFSSDDDFSKDED
DEEFERLWQDRQTKKSSNGPSLSNSYSGINTDQYNQQQQYNQQQQQYQSQN---

Frame A:
NNNMLKNLDFNSNDHSKLDNILLSEKSIERHRNPLSSSISSAPKPLDFDSDEDITEEYYK
KMLANHARSKKSKKETDKIFRELELSDDDVFDEKNDRKQLKMMKRLMDREDNDRRVKKKM
VDPKYNSSSSRSKDRYGSSSSSKSSKYNSSSSSSSSRSKDNKYIRPSIFSSDDDFSKDED
DEEFERLWQDRQTKKSSNGPSLSNSYSGINTDQYNQQQQYNQQQQQYQSQN---


Frame B:
tiic*ki*ilivtitlnwiify*aknqskdteihyhllfhqhqnhwilivmki*qkniik
kc*limqdqrnlkkklikylenwnylmmmflmkrmienn*k**kg*wierimiee*krkw
liqniivvvvdqkidmevvvvvnhqniihphhhhlqdqkiisi*dhqfsqvmmifqrmkm
mknlkdygkidrqrnqvmdqvcqihilvltqiniinnnniinnnnninhk---


Frame C:
q*yvkkfrf***rsl*ig*yfikrkinrktqksiiifyfistktigf****rynrril*k
nvs*sckikei*krn**ni*rigti***cf**ke**ktikndekvng*rg***kskkeng
*ski******ikr*iwk*****iiki*filiiiifkikr**vyktinflk***ffkg*r*
*ri*ktmar*tdkeik*wtkfvkfifwy*hrsi*sttti*sttttisitk---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLA594 (SLA594Q) /CSM/SL/SLA5-D/SLA594Q.Seq.d/                        702   0.0
AHR319 (AHR319Q) /CSM/AH/AHR3-A/AHR319Q.Seq.d/                        702   0.0
AHL541 (AHL541Q) /CSM/AH/AHL5-B/AHL541Q.Seq.d/                        702   0.0
AHA343 (AHA343Q) /CSM/AH/AHA3-B/AHA343Q.Seq.d/                        702   0.0
CHH319 (CHH319Q) /CSM/CH/CHH3-A/CHH319Q.Seq.d/                        278   1e-73
VHN373 (VHN373Q) /CSM/VH/VHN3-D/VHN373Q.Seq.d/                         46   7e-04
VHD796 (VHD796Q) /CSM/VH/VHD7-D/VHD796Q.Seq.d/                         46   7e-04
VSE535 (VSE535Q) /CSM/VS/VSE5-B/VSE535Q.Seq.d/                         42   0.011
VSA229 (VSA229Q) /CSM/VS/VSA2-B/VSA229Q.Seq.d/                         42   0.011
VFM737 (VFM737Q) /CSM/VF/VFM7-B/VFM737Q.Seq.d/                         42   0.011

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU060219) Dictyostelium discoideum slug cDNA, clone SLA594.      351   0.0    4
(BJ330367) Dictyostelium discoideum cDNA clone:dda31f11, 5' ...   351   0.0    4
(BJ339361) Dictyostelium discoideum cDNA clone:dda65f05, 5' ...   351   e-159  3
(BJ336529) Dictyostelium discoideum cDNA clone:dda54a11, 5' ...   351   e-159  3
(BJ365639) Dictyostelium discoideum cDNA clone:ddc36f05, 5' ...   274   4e-69  1
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2...    36   0.044  7
(DX249708) OR_ABa0137E03.f OR_ABa Oryza ridleyi genomic clon...    40   0.078  2
(AC152886) Medicago truncatula clone mth2-84j21, complete se...    38   0.11   5
(AC116918) Dictyostelium discoideum chromosome 2 map 6143698...    36   0.16   4
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7...    36   0.18   9

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY124372_1(AY124372|pid:none) Corsican bluetongue virus serotype...    42   0.023
(P32932) RecName: Full=Non-structural protein NS2;  &JC1256(JC12...    41   0.030
AC116963_43(AC116963|pid:none) Dictyostelium discoideum chromoso...    40   0.067
AE014188_193(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    40   0.067
AM900389_1(AM900389|pid:none) Bluetongue virus 8 segment 8, comp...    40   0.087
AM900374_1(AM900374|pid:none) Bluetongue virus 9 segment 8, comp...    40   0.087
DQ825673_1(DQ825673|pid:none) Bluetongue virus from Turkey segme...    40   0.087
CP001357_1368(CP001357|pid:none) Brachyspira hyodysenteriae WA1,...    39   0.11
T20531(T20531;T27776)hypothetical protein F07A11.6a - Caenorhabd...    39   0.15
AY857499_1(AY857499|pid:none) Bluetongue virus from France segme...    39   0.15

 psg: 0.49  gvh: 0.27  alm: 0.64  top: 0.53  tms: 0.00  mit: 0.26  mip: 0.00
 nuc: 0.06  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: nuclear
	 24.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for SLA594 is nuc

>SLA594F.Seq
AACAATAATATGTTAAAAAATTTAGATTTTAATAGTAACGATCACTCTAAATTGGATAAT
ATTTTATTAAGCGAAAAATCAATCGAAAGACACAGAAATCCATTATCATCTTCTATTTCA
TCAGCACCAAAACCATTGGATTTTGATAGTGATGAAGATATAACAGAAGAATATTATAAA
AAAATGTTAGCTAATCATGCAAGATCAAAGAAATCTAAAAAAGAAACTGATAAAATATTT
AGAGAATTGGAACTATCTGATGATGATGTTTTTGATGAAAAGAATGATAGAAAACAATTA
AAAATGATGAAAAGGTTAATGGATAGAGAGGATAATGATAGAAGAGTAAAAAAGAAAATG
GTTGATCCAAAATATAATAGTAGTAGTAGTAGATCAAAAGATAGATATGGAAGTAGTAGT
AGTAGTAAATCATCAAAATATAATTCATCCTCATCATCATCATCTTCAAGATCAAAAGAT
AATAAGTATATAAGACCATCAATTTTCTCAAGTGATGATGATTTTTCAAAGGATGAAGAT
GATGAAGAATTTGAAAGACTATGGCAAGATAGACAGACAAAGAAATCAAGTAATGGACCA
AGTTTGTCAAATTCATATTCTGGTATTAACACAGATCAATATAATCAACAACAACAATAT
AATCAACAACAACAACAATATCAATCACAAAATC----------