>SLA529 (SLA529Q) /CSM/SL/SLA5-B/SLA529Q.Seq.d/
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCTAATTAGCAACAACAGCTAAATATAAT
AAACCTAAGAGGACTTGAATTTCATCAAAGATTTTATTATTTTCGTGAGCAGTGTCTTTA
ACTAATTCATTGACAGCACCAGCGAGTTTACCAGCATTTTGAGAGATATCGAAAGACATT
GGGGTAGTTGAAGAGAGAGTCATACCAAAGTTTGCAGATTCCTTTACTAAATCCATGAGA
ATAGAGATGACAATATCACGATTAGAGGTTTTCTTTTGAATGATTTGTTTAACGGATTTA
GCAGAGAGAACGATACGATCAAGGAATTGTTGGGTAGTAGCGATTGGGAGATTGCTATGA
CTTTGATTGACAGAGACGGCAGCACCAGTTGAGAATGGAGATTGTGGTACAGATTGTTCG
GTTGGAGTCACTGGTGCAACCGGAGTGGTACTAGAGACTGGTGGTGAGGTAGTGCTTGGT
GAGGTAGCAGTTGGTGAGTTAATCTTTAAACCCCATCTTTCTAATCTCTTTGCCTCTTGC
TTCATTTTCTCTTCAGAGGTATGAGAATCAACGTTGTTCATAATGGAAGCACTATCGACT
AAATTCTCAGATGATGTTGAGCTGGCTACTCTAACTGGTGATTGATATTGCAAGAGGTTG
TTACTACTGGXXXXXXXXXX

ffffffffffl*lattakynkpkrt*isskillfs*avsltnsltapaslpaf*eiskdi
gvveervipkfadsftksmriemtisrlevff*micltdlaertirsrncwvvaigrll*
l*LTETAAPVENGDCGTDCSVGVTGATGVVLETGGEVVLGEVAVGELIFKPHLSNLFASC
FIFSSEV*estlfimealstkfsddvelatltgd*yckrllll---

Frame A:
ffffffffffl*lattakynkpkrt*isskillfs*avsltnsltapaslpaf*eiskdi
gvveervipkfadsftksmriemtisrlevff*micltdlaertirsrncwvvaigrll*
l*LTETAAPVENGDCGTDCSVGVTGATGVVLETGGEVVLGEVAVGELIFKPHLSNLFASC
FIFSSEV*estlfimealstkfsddvelatltgd*yckrllll---


Frame B:
ffffffffffsn*qqqlniinlrglefhqrfyyfreqcl*lih*qhqrvyqhferyrktl
g*lkresyqslqipllnp*e*r*qyhd*rfsfe*fv*ri*qrerydqgivg**rlgdcyd
fd*qrrqhqlrmeivvqivrleslvqpewy*rlvvr*clvr*qlvs*slnpiflislpla
sfslqryenqrcs*wkhyrlnsqmmlswll*lvidiargcyy---


Frame C:
fffffffffslisnns*i**t*edlnfikdfiifvssvfn*fidstseftsilrdierhw
gs*reshtkvcrfly*ihenrddnitirgfllndlfngfsrendtikellgssdweiamt
lidrdgsts*ewrlwyrlfgwshwcnrsgtrdww*gsaw*gssw*vnl*tpsf*slclll
hflfrgmrinvvhngstid*ilr*c*agysnw*lilqevvtt---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLA529 (SLA529Q) /CSM/SL/SLA5-B/SLA529Q.Seq.d/                       1269   0.0
SSC538 (SSC538Q) /CSM/SS/SSC5-B/SSC538Q.Seq.d/                       1261   0.0
SSC534 (SSC534Q) /CSM/SS/SSC5-B/SSC534Q.Seq.d/                       1261   0.0
SLC832 (SLC832Q) /CSM/SL/SLC8-B/SLC832Q.Seq.d/                       1237   0.0
SFC268 (SFC268Q) /CSM/SF/SFC2-C/SFC268Q.Seq.d/                       1179   0.0
CFA872 (CFA872Q) /CSM/CF/CFA8-C/CFA872Q.Seq.d/                       1150   0.0
SFG704 (SFG704Q) /CSM/SF/SFG7-A/SFG704Q.Seq.d/                       1138   0.0
AFF249 (AFF249Q) /CSM/AF/AFF2-C/AFF249Q.Seq.d/                       1102   0.0
SLI758 (SLI758Q) /CSM/SL/SLI7-C/SLI758Q.Seq.d/                       1043   0.0
CHD103 (CHD103Q) /CSM/CH/CHD1-A/CHD103Q.Seq.d/                       1033   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU060182) Dictyostelium discoideum slug cDNA, clone SLA529.     1265   0.0    1
(C84047) Dictyostelium discoideum slug cDNA, clone SSC538.       1257   0.0    1
(C84045) Dictyostelium discoideum slug cDNA, clone SSC534.       1257   0.0    1
(AF222688) Dictyostelium discoideum dynacortin (dct) mRNA, c...  1255   0.0    1
(AU034407) Dictyostelium discoideum slug cDNA, clone SLC832.     1237   0.0    1
(BJ399351) Dictyostelium discoideum cDNA clone:dds5g18, 3' e...  1152   0.0    2
(BJ373316) Dictyostelium discoideum cDNA clone:ddc2p18, 3' e...  1146   0.0    1
(BJ400628) Dictyostelium discoideum cDNA clone:dds14h01, 3' ...  1122   0.0    1
(BJ340061) Dictyostelium discoideum cDNA clone:dda11a14, 3' ...  1102   0.0    1
(AU053491) Dictyostelium discoideum slug cDNA, clone SLI758.     1043   0.0    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF222688_1(AF222688|pid:none) Dictyostelium discoideum dynacorti...   319   5e-86
CP000090_1303(CP000090|pid:none) Ralstonia eutropha JMP134 chrom...    37   0.69
FM992688_1247(FM992688|pid:none) Candida dubliniensis CD36 chrom...    35   2.6
EU565733_1(EU565733|pid:none) Uncultured soil bacterium clone gl...    35   2.6
CP000010_2763(CP000010|pid:none) Burkholderia mallei ATCC 23344 ...    34   3.4
CP000526_104(CP000526|pid:none) Burkholderia mallei SAVP1 chromo...    34   3.4
CP000151_2972(CP000151|pid:none) Burkholderia sp. 383 chromosome...    34   4.4
AP009385_2728(AP009385|pid:none) Burkholderia multivorans ATCC 1...    33   5.8
AM260479_1383(AM260479|pid:none) Ralstonia eutropha H16 chromoso...    33   5.8
CU633749_1281(CU633749|pid:none) Cupriavidus taiwanensis str. LM...    33   5.8

 psg: 0.75  gvh: 0.48  alm: 0.40  top: 0.53  tms: 0.00  mit: 0.22  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 24.0 %: nuclear
	  8.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: Golgi
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for SLA529 is cyt

>SLA529F.Seq
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCTAATTAGCAACAACAGCTAAATATAAT
AAACCTAAGAGGACTTGAATTTCATCAAAGATTTTATTATTTTCGTGAGCAGTGTCTTTA
ACTAATTCATTGACAGCACCAGCGAGTTTACCAGCATTTTGAGAGATATCGAAAGACATT
GGGGTAGTTGAAGAGAGAGTCATACCAAAGTTTGCAGATTCCTTTACTAAATCCATGAGA
ATAGAGATGACAATATCACGATTAGAGGTTTTCTTTTGAATGATTTGTTTAACGGATTTA
GCAGAGAGAACGATACGATCAAGGAATTGTTGGGTAGTAGCGATTGGGAGATTGCTATGA
CTTTGATTGACAGAGACGGCAGCACCAGTTGAGAATGGAGATTGTGGTACAGATTGTTCG
GTTGGAGTCACTGGTGCAACCGGAGTGGTACTAGAGACTGGTGGTGAGGTAGTGCTTGGT
GAGGTAGCAGTTGGTGAGTTAATCTTTAAACCCCATCTTTCTAATCTCTTTGCCTCTTGC
TTCATTTTCTCTTCAGAGGTATGAGAATCAACGTTGTTCATAATGGAAGCACTATCGACT
AAATTCTCAGATGATGTTGAGCTGGCTACTCTAACTGGTGATTGATATTGCAAGAGGTTG
TTACTACTGG----------