>SLA370 (SLA370Q) /CSM/SL/SLA3-C/SLA370Q.Seq.d/
CAAACATTTAAATGATGATTGGTTAGTCGACAATGGTTTCGTTGATCCAGAATACAAAAC
TAAAGATCAACAAGAAGAAGAGAAATATCATGGTGCCACCGTCAAAGATTTAACACTCCC
AAAACCAATCACCATCTCTGCCACCACCACTTGTGCTGCCGCAGTTCAACTCCTCCAACA
ATATGGTTTCGATCAATTACCAGTCGTTAGTGAATCAAAAAAAGTTTTAGGTCAACTCAC
TCTTGGTAACTTACTCTCACATATTGCCTCTXXXXXXXXXXCGGCGGAAATCCCGGCGGG
AGGGGAACCCCGGGGGGGTTTGGGCCCCCCCCCCCTGGGGGCCTTCCCCCCCAAATTTCC
CCCAAAAAAGCGTGCCCAACCTGGTCTTGGAGGTAAGGGTTGGGCCGGTTCCCCGGGGGG

KHLNDDWLVDNGFVDPEYKTKDQQEEEKYHGATVKDLTLPKPITISATTTCAAAVQLLQQ
YGFDQLPVVSESKKVLGQLTLGNLLSHIAS---

---RRKSRREGNPGGVWAPPPWGPSPPNFPQKSVPNLVLEVRVGPVPRG

Frame A:
qtfk**lvsrqwfr*sriqn*rstrrreiswchrqrfntpktnhhlchhhlccrsstppt
iwfrsitsr**ikksfrsthsw*ltltycl---

---RRKSRREGNPGGVWAPPPWGPSPPNFPQKSVPNLVLEVRVGPVPRG

Frame B:
KHLNDDWLVDNGFVDPEYKTKDQQEEEKYHGATVKDLTLPKPITISATTTCAAAVQLLQQ
YGFDQLPVVSESKKVLGQLTLGNLLSHIAS---

---ggnpggrgtpggfgppppgglppqispkkacptwswr*glgrfpgg

Frame C:
ni*mmig*stmvsliqntklkinkkkrnimvppski*hsqnqspslppplvlpqfnssnn
mvsinyqslvnqkkf*vnsllvtyshilp---

---aeipaggeprgglgppplgafppkfppkkraqpglggkgwagspg

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLA370 (SLA370Q) /CSM/SL/SLA3-C/SLA370Q.Seq.d/                        515   e-145
VSE607 (VSE607Q) /CSM/VS/VSE6-A/VSE607Q.Seq.d/                        496   e-139
VFO728 (VFO728Q) /CSM/VF/VFO7-B/VFO728Q.Seq.d/                        496   e-139
VFK535 (VFK535Q) /CSM/VF/VFK5-B/VFK535Q.Seq.d/                        496   e-139
VFK255 (VFK255Q) /CSM/VF/VFK2-C/VFK255Q.Seq.d/                        496   e-139
VFH584 (VFH584Q) /CSM/VF/VFH5-D/VFH584Q.Seq.d/                        496   e-139
VFD283 (VFD283Q) /CSM/VF/VFD2-D/VFD283Q.Seq.d/                        496   e-139
VFA677 (VFA677Q) /CSM/VF/VFA6-D/VFA677Q.Seq.d/                        496   e-139
SLC737 (SLC737Q) /CSM/SL/SLC7-B/SLC737Q.Seq.d/                        496   e-139
SFI528 (SFI528Q) /CSM/SF/SFI5-B/SFI528Q.Seq.d/                        496   e-139

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U27536|U27536.1 Dictyostelium discoideum cystathionine beta synthase mRNA, complete cds.   428   e-123  2
CE315501|CE315501.1 tigr-gss-dog-17000361041703 Dog Library Canis familiaris genomic, genomic survey sequence.    48   0.097  1
CE386559|CE386559.1 tigr-gss-dog-17000334388679 Dog Library Canis familiaris genomic, genomic survey sequence.    48   0.097  1
AC139898|AC139898.2 Rattus norvegicus clone CH230-275J5, WORKING DRAFT SEQUENCE, 32 unordered pieces.    46   0.38   1
AC005996|AC005996.2 Homo sapiens PAC clone RP4-555L14 from 7q34-q36, complete sequence.    46   0.38   1
X96871|X96871.1 Equine Rhinovirus type 2 genomic sequence.         32   0.90   2
AC146169|AC146169.2 Pan troglodytes BAC clone RP43-1A11 from 7, complete sequence.    44   1.5    1
BZ490588|BZ490588.1 BONQZ93TR BO_1.6_2_KB_tot Brassica oleracea genomic clone BONQZ93, DNA sequence.    44   1.5    1
CK196984|CK196984.1 FGAS005454 Triticum aestivum FGAS: Library 3 Gate 6 Triticum aestivum cDNA, mRNA sequence.    36   2.0    2
CF312046|CF312046.1 ABF--07-J09.b1 ABF3-overexpressing transgenic rice plasmid cDNA library (ABF) Oryza sativa cDNA clone ABF--07-J09, mRNA sequence.    34   4.1    2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U27536_1(U27536|pid:none) Dictyostelium discoideum cystathionine...   131   6e-30
AF424661_1(AF424661|pid:none) Phytophthora infestans clone MY-10...    60   3e-08
BC077504_1(BC077504|pid:none) Xenopus laevis cystathionine-beta-...    57   2e-07
AK077669_1(AK077669|pid:none) Mus musculus 8 days embryo whole b...    56   4e-07
M88346_1(M88346|pid:none) Rat cystathionine beta-synthase mRNA, ...    56   4e-07
(P32232) RecName: Full=Cystathionine beta-synthase;          EC=...    56   4e-07
BC044091_1(BC044091|pid:none) Xenopus laevis cystathionine-beta-...    55   7e-07
EU315112_1(EU315112|pid:none) Oncorhynchus mykiss cystathionine-...    55   9e-07
(Q58H57) RecName: Full=Cystathionine beta-synthase;          EC=...    55   9e-07
AY891587_1(AY891587|pid:none) Synthetic construct Homo sapiens c...    54   2e-06

 psg: 0.75  gvh: 0.48  alm: 0.40  top: 0.53  tms: 0.00  mit: 0.25  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.33  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: nuclear
	 32.0 %: cytoplasmic
	  8.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  8.0 %: vacuolar

>> prediction for SLA370 is nuc

>SLA370F.Seq
CAAACATTTAAATGATGATTGGTTAGTCGACAATGGTTTCGTTGATCCAGAATACAAAAC
TAAAGATCAACAAGAAGAAGAGAAATATCATGGTGCCACCGTCAAAGATTTAACACTCCC
AAAACCAATCACCATCTCTGCCACCACCACTTGTGCTGCCGCAGTTCAACTCCTCCAACA
ATATGGTTTCGATCAATTACCAGTCGTTAGTGAATCAAAAAAAGTTTTAGGTCAACTCAC
TCTTGGTAACTTACTCTCACATATTGCCTCT----------

>SLA370Z.Seq
----------
CGGCGGAAATCCCGGCGGGAGGGGAACCCCGGGGGGGTTTGGGCCCCCC
CCCCCTGGGGGCCTTCCCCCCCAAATTTCCCCCAAAAAAGCGTGCCCAACCTGGTCTTGG
AGGTAAGGGTTGGGCCGGTTCCCCGGGGGG

>SLA370P.Seq
CAAACATTTAAATGATGATTGGTTAGTCGACAATGGTTTCGTTGATCCAGAATACAAAAC
TAAAGATCAACAAGAAGAAGAGAAATATCATGGTGCCACCGTCAAAGATTTAACACTCCC
AAAACCAATCACCATCTCTGCCACCACCACTTGTGCTGCCGCAGTTCAACTCCTCCAACA
ATATGGTTTCGATCAATTACCAGTCGTTAGTGAATCAAAAAAAGTTTTAGGTCAACTCAC
TCTTGGTAACTTACTCTCACATATTGCCTCT----------CGGCGGAAATCCCGGCGGG
AGGGGAACCCCGGGGGGGTTTGGGCCCCCCCCCCCTGGGGGCCTTCCCCCCCAAATTTCC
CCCAAAAAAGCGTGCCCAACCTGGTCTTGGAGGTAAGGGTTGGGCCGGTTCCCCGGGGGG