>SLA218 (SLA218Q) /CSM/SL/SLA2-A/SLA218Q.Seq.d/
XXXXXXXXXXGTCTCTCAACTGAAGTCAAATCAGTCGAAATGCATCACGAACAACTCCCA
GAAGCCCGTCCAGGTGACAATGTAGGTTTCAACGTTAAAAACGTTTCAGTCAAAGAAATT
AAAAGAGGTATGGTCGCTGGTGACTCCAAAAACGATCCACCACAAGAAACTGAAAAATTC
GTTGCTCAAGTTATCGTCCTCAACCATCCAGGTCAAATCCATGCTGGTTACTCACCAGTC
TTAGATTGTCACACTGCTCACATTGCCTGTAAATTCACTGAAATCGTCGATAAAGTTGAT
CGTCGTACTGGTGCCGTCGTTGCCAAAGAAGGTACTGCCGCCGTCGTCTTAAAGAATGGT
GATGCCGCTATGGTCGAATTAACCCCATCTCGTCCAATGTGTGTTGAATCCTTCACTGAA
TACCCACCATTAGGTCGTTTCGCCGTCAGAGATATGAGACAAACCGTCGCCGTCGGTGTC
ATCAAATCAACCGTCAAGAAAGCCCCAGGTAAAGCCGGTGATAAGAAAGGTGCTGCTGCC
CCACCAAAAAAGAAATAAATAAATAATATTTCTTAATAAATAGCATTTTATAATAATTTT
AA

---LSTEVKSVEMHHEQLPEARPGDNVGFNVKNVSVKEIKRGMVAGDSKNDPPQETEKFV
AQVIVLNHPGQIHAGYSPVLDCHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGD
AAMVELTPSRPMCVESFTEYPPLGRFAVRDMRQTVAVGVIKSTVKKAPGKAGDKKGAAAP
PKKK*innis**iafynnf

Frame A:
---sln*sqisrnasrttprspsr*qcrfqr*krfsqrn*krygrw*lqkrsttrn*kir
cssyrpqpsrsnpcwlltslrlshcshcl*ih*nrr*s*ssywcrrcqrrycrrrlkew*
crygrinpissnvc*ilh*iptirsfrrqryetnrrrrchqinrqespr*sr**ercccp
tkkeink*yflinsil**f*


Frame B:
---LSTEVKSVEMHHEQLPEARPGDNVGFNVKNVSVKEIKRGMVAGDSKNDPPQETEKFV
AQVIVLNHPGQIHAGYSPVLDCHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGD
AAMVELTPSRPMCVESFTEYPPLGRFAVRDMRQTVAVGVIKSTVKKAPGKAGDKKGAAAP
PKKK*innis**iafynnf


Frame C:
---sqlksnqskcitnnsqkpvqvtm*vstlktfqskklkevwslvtpktihhkklknsl
lklssstiqvksmlvthqs*ivtlltlpvnslkssiklivvlvpslpkkvlppss*rmvm
plwsn*phlvqcvlnpslnthh*vvspsei*dkpspsvssnqpsrkpqvkpvirkvllph
qkrnk*iiflnk*hfiiil

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLA218 (SLA218Q) /CSM/SL/SLA2-A/SLA218Q.Seq.d/                       1059   0.0
VSE380 (VSE380Q) /CSM/VS/VSE3-D/VSE380Q.Seq.d/                       1057   0.0
VSD740 (VSD740Q) /CSM/VS/VSD7-B/VSD740Q.Seq.d/                       1057   0.0
VSD380 (VSD380Q) /CSM/VS/VSD3-D/VSD380Q.Seq.d/                       1057   0.0
VSD312 (VSD312Q) /CSM/VS/VSD3-A/VSD312Q.Seq.d/                       1057   0.0
VFO616 (VFO616Q) /CSM/VF/VFO6-A/VFO616Q.Seq.d/                       1057   0.0
VFO348 (VFO348Q) /CSM/VF/VFO3-B/VFO348Q.Seq.d/                       1057   0.0
VFN666 (VFN666Q) /CSM/VF/VFN6-C/VFN666Q.Seq.d/                       1057   0.0
VFN474 (VFN474Q) /CSM/VF/VFN4-D/VFN474Q.Seq.d/                       1057   0.0
VFN472 (VFN472Q) /CSM/VF/VFN4-C/VFN472Q.Seq.d/                       1057   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X55973|X55973.1 D. discoideum EF1-I gene for elongation factor 1 alpha.  1057   0.0    1
X55972|X55972.1 D. discoideum EF1-II gene for elongation factor 1 alpha.  1001   0.0    1
AF016242|AF016242.1 Dictyostelium discoideum protein synthesis elongation factor 1-alpha (tef2) gene, partial cds.   833   0.0    1
M29935|M29935.1 C.albicans elongation factor 1-alpha (TEF-2) gene, complete cds.   117   5e-78  5
M29934|M29934.1 C.albicans elongation factor 1-alpha (TEF-1) gene, complete cds.   117   1e-75  5
AX109696|AX109696.1 Sequence 429 from Patent WO0123604.           105   8e-66  5
AX109678|AX109678.1 Sequence 411 from Patent WO0123604.           101   8e-66  5
AX109677|AX109677.1 Sequence 410 from Patent WO0123604.           101   8e-66  5
AL409155|AL409155.1 T7 end of clone AV0AA013A10 of library AV0AA from strain CBS 379 of Saccharomyces exiguus.   101   1e-65  5
AX109675|AX109675.1 Sequence 408 from Patent WO0123604.           101   3e-65  5

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X55973_1(X55973|pid:none) D. discoideum EF1-I gene for elongatio...   324   1e-87
X55972_1(X55972|pid:none) D. discoideum EF1-II gene for elongati...   324   1e-87
(P18624) RecName: Full=Elongation factor 1-alpha;          Short...   324   1e-87
AY542532_1(AY542532|pid:none) Cladonema radiatum translation elo...   250   2e-65
AJ581004_1(AJ581004|pid:none) Axinella verrucosa mRNA for elonga...   248   7e-65
(Q00251) RecName: Full=Elongation factor 1-alpha;          Short...   247   2e-64
AY582829_1(AY582829|pid:none) Acanthamoeba culbertsoni ef1a gene...   247   2e-64
Y09023_1(Y09023|pid:none) G.cydonium mRNA for elongation factor ...   247   2e-64
AB326305_1(AB326305|pid:none) Solea senegalensis SseEF1A4 mRNA f...   246   3e-64
AJ549292_1(AJ549292|pid:none) Podocoryne carnea mRNA for elongat...   245   6e-64

 psg: 0.75  gvh: 0.29  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.19  mip: 0.00
 nuc: 0.03  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 44.0 %: nuclear
	  4.0 %: vacuolar
	  4.0 %: mitochondrial
	  4.0 %: peroxisomal

>> prediction for SLA218 is cyt

>SLA218Z.Seq
----------GTCTCTCAACTGAAGTCAAATCAGTCGAAATGCATCACGAACAACTCCCA
GAAGCCCGTCCAGGTGACAATGTAGGTTTCAACGTTAAAAACGTTTCAGTCAAAGAAATT
AAAAGAGGTATGGTCGCTGGTGACTCCAAAAACGATCCACCACAAGAAACTGAAAAATTC
GTTGCTCAAGTTATCGTCCTCAACCATCCAGGTCAAATCCATGCTGGTTACTCACCAGTC
TTAGATTGTCACACTGCTCACATTGCCTGTAAATTCACTGAAATCGTCGATAAAGTTGAT
CGTCGTACTGGTGCCGTCGTTGCCAAAGAAGGTACTGCCGCCGTCGTCTTAAAGAATGGT
GATGCCGCTATGGTCGAATTAACCCCATCTCGTCCAATGTGTGTTGAATCCTTCACTGAA
TACCCACCATTAGGTCGTTTCGCCGTCAGAGATATGAGACAAACCGTCGCCGTCGGTGTC
ATCAAATCAACCGTCAAGAAAGCCCCAGGTAAAGCCGGTGATAAGAAAGGTGCTGCTGCC
CCACCAAAAAAGAAATAAATAAATAATATTTCTTAATAAATAGCATTTTATAATAATTTT
AA