>SLA192 (SLA192Q) /CSM/SL/SLA1-D/SLA192Q.Seq.d/
XXXXXXXXXXCGACGAAAATGTCCTCCAACGAACAAATCAGAGCTGATTTGAAAGAATTA
GTCATCAAAGCTGTTGTTCCAGCTCAATACTTAGACGATAACACCATCTACCATTTGAAT
CCATCAGGTCGTTTCGTCATTGGTGGCCCAATGGGTGATTCTGGTTTAACCGGTCGTAAG
ATCATCATTGATTCATATGGTGGTTGGGGTGCTCACGGTGGTGGTGCTTTCTCTGGTAAA
GATGCCACTAAAGTCGATCGTTCTGGTGCTTACGCTGCTAGATGGATCGCTAAATCTTTA
GTTGCCGCTGGTCTTGCCGATCGTTGTTTAGTTCAAGTTTCATACTCTATTGGTGTTGCC
AAGCCACTCAGTGTCTTTGTTGATACCTATGGTACCGGTAAAAAGACTGATGCTGAAATC
CTTGCCATCATCGATAATAACTTTGATTTACGTCCAGGTTGTTTAATGCGTGACCTCCAA
TTAACTCGTCCAATTTTCCAAAAAACTGCCTCTGGTGGTCACTTTGGTAGAAATGATCCA
GACTTTACCTGGGAAACCGTCAAAGAACTCAAGATGTAAGGATAGATCAATGAATAAATA
AGATAGATAAATAAGTGAAAAAAAAAAAATATAATAATC

---TKMSSNEQIRADLKELVIKAVVPAQYLDDNTIYHLNPSGRFVIGGPMGDSGLTGRKI
IIDSYGGWGAHGGGAFSGKDATKVDRSGAYAARWIAKSLVAAGLADRCLVQVSYSIGVAK
PLSVFVDTYGTGKKTDAEILAIIDNNFDLRPGCLMRDLQLTRPIFQKTASGGHFGRNDPD
FTWETVKELKM*g*ine*ir*ink*kkkniii

Frame A:
---denvlqrtnqs*ferishqsccsssilrr*hhlpfesirsfrhwwpng*fwfnrs*d
hh*fiwwlgcsrwwcflw*rch*srsfwclrc*mdr*ifscrwscrslfsssfilywccq
atqclc*ylwyr*kd*c*npchhr**l*ftsrlfna*ppinssnfpknclwwslw*k*sr
lylgnrqrtqdvridq*inkidk*vkkkkynn


Frame B:
---TKMSSNEQIRADLKELVIKAVVPAQYLDDNTIYHLNPSGRFVIGGPMGDSGLTGRKI
IIDSYGGWGAHGGGAFSGKDATKVDRSGAYAARWIAKSLVAAGLADRCLVQVSYSIGVAK
PLSVFVDTYGTGKKTDAEILAIIDNNFDLRPGCLMRDLQLTRPIFQKTASGGHFGRNDPD
FTWETVKELKM*g*ine*ir*ink*kkkniii


Frame C:
---rkcpptnkseli*kn*sskllfqlnt*titpsti*ihqvvsslvaqwvilv*pvvrs
slihmvvgvltvvvlslvkmplksivlvltlldgslnl*lplvlpivv*fkfhtllvlps
hsvsllipmvpvkrlmlkslpssiitliyvqvv*cvtsn*lvqfskklplvvtlvemiqt
lpgkpsknsrckdrsmnk*dr*isekkki**

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLA192 (SLA192Q) /CSM/SL/SLA1-D/SLA192Q.Seq.d/                       1203   0.0
SLC723 (SLC723Q) /CSM/SL/SLC7-A/SLC723Q.Seq.d/                       1174   0.0
SLB742 (SLB742Q) /CSM/SL/SLB7-B/SLB742Q.Seq.d/                       1174   0.0
SLA169 (SLA169Q) /CSM/SL/SLA1-C/SLA169Q.Seq.d/                       1160   0.0
SLA812 (SLA812Q) /CSM/SL/SLA8-A/SLA812Q.Seq.d/                       1158   0.0
VFH824 (VFH824Q) /CSM/VF/VFH8-A/VFH824Q.Seq.d/                       1146   0.0
VFC849 (VFC849Q) /CSM/VF/VFC8-C/VFC849Q.Seq.d/                       1144   0.0
VFG721 (VFG721Q) /CSM/VF/VFG7-A/VFG721Q.Seq.d/                       1142   0.0
VFF394 (VFF394Q) /CSM/VF/VFF3-D/VFF394Q.Seq.d/                       1142   0.0
VFD479 (VFD479Q) /CSM/VF/VFD4-D/VFD479Q.Seq.d/                       1142   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

CB893745|CB893745.1 EST646537 HOGA Medicago truncatula cDNA clone HOGA-28J20, mRNAsequence.   105   5e-25  2
BG649115|BG649115.1 EST510734 HOGA Medicago truncatula cDNA clone pHOGA-24N6 5' end, mRNA sequence.   105   5e-25  2
CA921148|CA921148.1 EST638866 MTUS Medicago truncatula cDNA clone MTUS-36E12, mRNA sequence.   105   5e-25  2
BG588836|BG588836.1 EST490645 MHRP- Medicago truncatula cDNA clone pMHRP-57N3, mRNA sequence.   105   5e-25  2
BG646968|BG646968.1 EST508587 HOGA Medicago truncatula cDNA clone pHOGA-15E22 5' end, mRNA sequence.   105   5e-25  2
BQ750412|BQ750412.1 EST633148 KVKC Medicago truncatula cDNA, mRNA sequence.   105   5e-25  2
BI272067|BI272067.1 NF019H07FL1F1063 Developing flower Medicago truncatula cDNA clone NF019H07FL 5', mRNA sequence.   105   5e-25  2
BG586952|BG586952.1 EST488721 MHAM Medicago truncatula/Glomus versiforme mixed EST library cDNA clone pMHAM-47E18 5' end, mRNA sequence.   105   5e-25  2
CA918081|CA918081.1 EST642228 GPOD Medicago truncatula cDNA clone GPOD-38O15, mRNA sequence.   105   5e-25  2
BG645897|BG645897.1 EST507516 KV3 Medicago truncatula cDNA clone pKV3-47L8 5' end, mRNA sequence.   105   5e-25  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54F07) RecName: Full=S-adenosylmethionine synthetase;         ...   338   6e-92
AB461925_1(AB461925|pid:none) Ditylum brightwellii MAT mRNA for ...   250   2e-65
AB461924_1(AB461924|pid:none) Cylindrotheca closterium MAT mRNA ...   250   2e-65
FJ404748_1(FJ404748|pid:none) Porphyra yezoensis putative S-aden...   250   3e-65
AY324626_1(AY324626|pid:none) Amoeba proteus S-adenosylmethionin...   249   5e-65
AB461922_1(AB461922|pid:none) Asterionella glacialis MAT mRNA fo...   242   7e-63
(P50301) RecName: Full=S-adenosylmethionine synthetase 1;       ...   241   2e-62
(A9NUH8) RecName: Full=S-adenosylmethionine synthetase 1;       ...   240   3e-62
FJ461753_1(FJ461753|pid:none) Chrysanthemum coronarium S-adenosy...   239   4e-62
(A9NYY0) RecName: Full=S-adenosylmethionine synthetase 2;       ...   239   5e-62

 psg: 0.62  gvh: 0.38  alm: 0.41  top: 0.53  tms: 0.00  mit: 0.28  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 40.0 %: nuclear
	 12.0 %: mitochondrial
	  4.0 %: peroxisomal

>> prediction for SLA192 is cyt

>SLA192Z.Seq
----------CGACGAAAATGTCCTCCAACGAACAAATCAGAGCTGATTTGAAAGAATTA
GTCATCAAAGCTGTTGTTCCAGCTCAATACTTAGACGATAACACCATCTACCATTTGAAT
CCATCAGGTCGTTTCGTCATTGGTGGCCCAATGGGTGATTCTGGTTTAACCGGTCGTAAG
ATCATCATTGATTCATATGGTGGTTGGGGTGCTCACGGTGGTGGTGCTTTCTCTGGTAAA
GATGCCACTAAAGTCGATCGTTCTGGTGCTTACGCTGCTAGATGGATCGCTAAATCTTTA
GTTGCCGCTGGTCTTGCCGATCGTTGTTTAGTTCAAGTTTCATACTCTATTGGTGTTGCC
AAGCCACTCAGTGTCTTTGTTGATACCTATGGTACCGGTAAAAAGACTGATGCTGAAATC
CTTGCCATCATCGATAATAACTTTGATTTACGTCCAGGTTGTTTAATGCGTGACCTCCAA
TTAACTCGTCCAATTTTCCAAAAAACTGCCTCTGGTGGTCACTTTGGTAGAAATGATCCA
GACTTTACCTGGGAAACCGTCAAAGAACTCAAGATGTAAGGATAGATCAATGAATAAATA
AGATAGATAAATAAGTGAAAAAAAAAAAATATAATAATC