>SLA186 (SLA186Q) /CSM/SL/SLA1-D/SLA186Q.Seq.d/
XXXXXXXXXXCATTATCGATGGTGTAAAAGTAATCTTCTCAAAGAATGACCCATCACAAA
AGATTCAAACCTATGAATTCCAAGAGAATGAAGTTTACTGCATCGATATCGTCATGAGCA
CTGGTGAAGGTAAAGCTCGTGAAGAAGCTGATCGTCCAACCATTTACAGAAGAAATTTAG
ATAGCACTTACAAATTAAAATCAAAGGCCTCTCGTGATTTCAAAGATCAAATCGTTAAAC
GTTACTCTGCCCTTCCATTCCCATTAAGAAACTTTGATGAAAAAGTTAGCAAACTCGGTT
TGGTCGAACTCGTTGAACATCAAGTTTTAGCCGCTTACCCAGTACTCTTTGATAGATCCG
GTTGTGAAGTCGTTCAATTCAAAACTACCGTTTTAGTCTTACCAAATGGTAACCATAAAC
TCATTGGTACTGAATTCCCATTACCATTCGTTAGATCAGAATTCTCTGTCACTGATGATG
CCATCAAAGCTTTAATCGCTTCACCATTGAAAATTAATAAAAAAGCTGCCAAAAAAGCTT
CCGCCACTACCACTGATGTTAAAATGCAATAAATTAATAAATTAATAAATTTTTAAAAAA
TTTATGTATAAAAAAAAA

---IIDGVKVIFSKNDPSQKIQTYEFQENEVYCIDIVMSTGEGKAREEADRPTIYRRNLD
STYKLKSKASRDFKDQIVKRYSALPFPLRNFDEKVSKLGLVELVEHQVLAAYPVLFDRSG
CEVVQFKTTVLVLPNGNHKLIGTEFPLPFVRSEFSVTDDAIKALIASPLKINKKAAKKAS
ATTTDVKMQ*inklinf*kiyv*kk

Frame A:
---IIDGVKVIFSKNDPSQKIQTYEFQENEVYCIDIVMSTGEGKAREEADRPTIYRRNLD
STYKLKSKASRDFKDQIVKRYSALPFPLRNFDEKVSKLGLVELVEHQVLAAYPVLFDRSG
CEVVQFKTTVLVLPNGNHKLIGTEFPLPFVRSEFSVTDDAIKALIASPLKINKKAAKKAS
ATTTDVKMQ*inklinf*kiyv*kk


Frame B:
---lsmv*k*ssqrmthhkrfkpmnskrmkftasiss*alvkvklvkklivqpfteei*i
altn*nqrplviskikslnvtlpfhsh*etlmkklansvwsnslnikf*pltqyslidpv
vksfnsklpf*syqmvtinslvlnshyhsldqnslslmmpskl*slhh*klikklpkklp
plplmlkcnklin**ifkkfmykkk


Frame C:
---yrwcksnllke*pitkdsnl*ipre*sllhryrhehw*r*ss*rs*ssnhlqkkfr*
hlqikikgls*fqrsnr*tllcpsipikkl**ks*qtrfgrtr*tssfsrlpstl**irl
*srsiqnyrfsltkw*p*thwy*ipitir*irilch**chqsfnrftien**kscqksfr
hyh*c*nain**inkflknlcikk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLA186 (SLA186Q) /CSM/SL/SLA1-D/SLA186Q.Seq.d/                       1084   0.0
VSJ621 (VSJ621Q) /CSM/VS/VSJ6-A/VSJ621Q.Seq.d/                       1068   0.0
VFK570 (VFK570Q) /CSM/VF/VFK5-C/VFK570Q.Seq.d/                       1068   0.0
VFD338 (VFD338Q) /CSM/VF/VFD3-B/VFD338Q.Seq.d/                       1068   0.0
SLB642 (SLB642Q) /CSM/SL/SLB6-B/SLB642Q.Seq.d/                       1068   0.0
SLA750 (SLA750Q) /CSM/SL/SLA7-C/SLA750Q.Seq.d/                       1068   0.0
CHB686 (CHB686Q) /CSM/CH/CHB6-D/CHB686Q.Seq.d/                       1068   0.0
CHB444 (CHB444Q) /CSM/CH/CHB4-B/CHB444Q.Seq.d/                       1068   0.0
CHB196 (CHB196Q) /CSM/CH/CHB1-D/CHB196Q.Seq.d/                       1068   0.0
CFK194 (CFK194Q) /CSM/CF/CFK1-D/CFK194Q.Seq.d/                       1068   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U61403|U61403.1 Dictyostelium discoideum PrlA (prlA) mRNA, partial cds.  1061   0.0    1
AL645963|AL645963.9 Mouse DNA sequence from clone RP23-76C16 on chromosome 11.    48   0.14   1
AC131792|AC131792.4 Mus musculus BAC clone RP24-468O15 from chromosome 19, complete sequence.    36   0.43   5
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.    36   1.1    10
BX649299|BX649299.5 Zebrafish DNA sequence from clone CH211-209E14 in linkage group 20.    32   1.6    8
AC116979|AC116979.2 Dictyostelium discoideum chromosome 2 map 6357117-6445670 strain AX4, complete sequence.    32   1.7    6
AC141478|AC141478.3 Mus musculus BAC clone RP24-82N16 from chromosome 18, complete sequence.    34   2.0    5
BI406884|BI406884.1 183A12 Mature tuber lambda ZAP Solanum tuberosum cDNA, mRNA sequence.    44   2.3    1
AI483524|AI483524.1 EST249373 tomato ovary, TAMU Lycopersicon esculentum cDNA clone cLED25K8, mRNA sequence.    44   2.3    1
BG350637|BG350637.1 095F02 Mature tuber lambda ZAP Solanum tuberosum cDNA, mRNA sequence.    44   2.3    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q1ZXG4) RecName: Full=Proliferation-associated protein A;            337   2e-91
DQ519359_1(DQ519359|pid:none) Ammopiptanthus mongolicus cold-ind...   134   3e-30
AF281652_1(AF281652|pid:none) Atriplex hortensis putative DNA bi...   132   6e-30
BC044287_1(BC044287|pid:none) Xenopus laevis similar to prolifer...   131   1e-29
BC073401_1(BC073401|pid:none) Xenopus laevis MGC80858 protein, m...   131   2e-29
U87954_1(U87954|pid:none) Human erbB3 binding protein EBP1 mRNA,...   129   6e-29
BC032111_1(BC032111|pid:none) Homo sapiens proliferation-associa...   129   6e-29
S54181(I48702;S54181) p38-2G4 protein - mouse  &X84789_1(X84789|...   129   6e-29
U59435_1(U59435|pid:none) Human cell cycle protein p38-2G4 homol...   129   6e-29
BC103292_1(BC103292|pid:none) Bos taurus proliferation-associate...   129   6e-29

 psg: 0.47  gvh: 0.40  alm: 0.40  top: 0.53  tms: 0.00  mit: 0.18  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: cytoplasmic
	 24.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: extracellular, including cell wall
	  4.0 %: cytoskeletal
	  4.0 %: peroxisomal

>> prediction for SLA186 is cyt

>SLA186Z.Seq
----------CATTATCGATGGTGTAAAAGTAATCTTCTCAAAGAATGACCCATCACAAA
AGATTCAAACCTATGAATTCCAAGAGAATGAAGTTTACTGCATCGATATCGTCATGAGCA
CTGGTGAAGGTAAAGCTCGTGAAGAAGCTGATCGTCCAACCATTTACAGAAGAAATTTAG
ATAGCACTTACAAATTAAAATCAAAGGCCTCTCGTGATTTCAAAGATCAAATCGTTAAAC
GTTACTCTGCCCTTCCATTCCCATTAAGAAACTTTGATGAAAAAGTTAGCAAACTCGGTT
TGGTCGAACTCGTTGAACATCAAGTTTTAGCCGCTTACCCAGTACTCTTTGATAGATCCG
GTTGTGAAGTCGTTCAATTCAAAACTACCGTTTTAGTCTTACCAAATGGTAACCATAAAC
TCATTGGTACTGAATTCCCATTACCATTCGTTAGATCAGAATTCTCTGTCACTGATGATG
CCATCAAAGCTTTAATCGCTTCACCATTGAAAATTAATAAAAAAGCTGCCAAAAAAGCTT
CCGCCACTACCACTGATGTTAAAATGCAATAAATTAATAAATTAATAAATTTTTAAAAAA
TTTATGTATAAAAAAAAA