>SLA185 (SLA185Q) /CSM/SL/SLA1-D/SLA185Q.Seq.d/
XXXXXXXXXXCCCATACGTAGGTGATTCAAAGAGAGCTATGGATGAATATACCTCACAAA
TCTTTATGGGTGGTCACAATACAATCGTTCTCCACAACACTTGTGAAGATTCTTTATTAG
CCGCTCCAATTATTTTAGATTTAGTTATTCTTGCTGAAGTTACTAGTCGTATCACAATGA
AAAAACAAGATGATGATCAATTTGCTACTTTCCATCCAGNTTTATCATTATTATCATACC
TCCTTAAAGCCCCAATTGTTCCAAAACATGCTACCGTTGTAAATGCACTCTTCAAACAAA
GAGCCTGCATAGAAAATATCTTCAAAGCATGCGTTGGTATCGCTCCAGATAATAACATGT
TATTAGAACAAAGATTATAAATAATACAAACAATTTCAATAATAATAACATTTATTTAAA
AAATAACTTCCATTTATAATAAAATAATCTTTTGTAAAATTTAATAACTCTAAAAAAAAA
AAAAAAAAAAAAAAAAATTAAAAAAAAAATTA

---PYVGDSKRAMDEYTSQIFMGGHNTIVLHNTCEDSLLAAPIILDLVILAEVTSRITMK
KQDDDQFATFHPXLSLLSYLLKAPIVPKHATVVNALFKQRACIENIFKACVGIAPDNNML
LEQRL*iiqtisiiitfi*kitsiynkiifcki**l*kkkkkkkklkkkl

Frame A:
---PYVGDSKRAMDEYTSQIFMGGHNTIVLHNTCEDSLLAAPIILDLVILAEVTSRITMK
KQDDDQFATFHPXLSLLSYLLKAPIVPKHATVVNALFKQRACIENIFKACVGIAPDNNML
LEQRL*iiqtisiiitfi*kitsiynkiifcki**l*kkkkkkkklkkkl


Frame B:
---ht*viqrelwmniphkslwvvtiqsfsttlvkily*plqlf*i*lfllkllvvsq*k
nkmminlllsiqxyhyyhtslkpqlfqnmlpl*mhssnkepa*kisskhalvslqiitcy
*nkdyk*ykqfq***hlfkk*lpfiik*sfvkfnnskkkkkkkkn*kkn


Frame C:
---irr*fkesyg*iyltnlygwsqynrspqhl*rffisrsnyfrfsysc*sy*syhnek
tr**sicyfpsxfiiiiipp*spncsktcyrckctlqtkslhrkylqsmrwyrsr**hvi
rtkiinntnnfnnnniylknnfhl**nnll*nlitlkkkkkkkkikkki

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLA185 (SLA185Q) /CSM/SL/SLA1-D/SLA185Q.Seq.d/                        908   0.0
SLI647 (SLI647Q) /CSM/SL/SLI6-B/SLI647Q.Seq.d/                        900   0.0
SLD414 (SLD414Q) /CSM/SL/SLD4-A/SLD414Q.Seq.d/                        900   0.0
SLD258 (SLD258Q) /CSM/SL/SLD2-C/SLD258Q.Seq.d/                        900   0.0
SLB787 (SLB787Q) /CSM/SL/SLB7-D/SLB787Q.Seq.d/                        900   0.0
SLB678 (SLB678Q) /CSM/SL/SLB6-D/SLB678Q.Seq.d/                        900   0.0
FC-IC0800 (FC-IC0800Q) /CSM/FC-IC/FC-IC0800Q.Seq.d/                   900   0.0
FC-AN23 (FC-AN23Q) /CSM/FC/FC-AN/FC-AN23Q.Seq.d/                      900   0.0
FC-AA11 (FC-AA11Q) /CSM/FC/FC-AA/FC-AA11Q.Seq.d/                      900   0.0
FC-010 (FC-010Q) /CSM/CG/CG-FC/FC-010Q.Seq.d/                         900   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AF250284|AF250284.1 Amsacta moorei entomopoxvirus, complete genome.    36   3e-09  14
BH162932|BH162932.1 ENTQW03TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    50   1e-08  2
BH155145|BH155145.1 ENTTB84TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    50   1e-08  2
AZ679596|AZ679596.1 ENTKR11TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    50   1e-08  2
AZ675584|AZ675584.1 ENTKP25TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    50   1e-08  2
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           38   1e-06  19
BZ335574|BZ335574.1 hz25e07.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum bicolor genomic clone hz25e07 5', DNA sequence.    64   2e-06  1
AC006281|AC006281.8 Plasmodium falciparum chromosome 12 clone 3D7, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.    32   3e-06  12
Y11270|Y11270.1 E.histolytica INO1 gene.                           40   8e-06  2
AB090886|AB090886.1 Aster tripolium mRNA for myo-inositol-1-phosphate synthase, partial cds.    44   8e-06  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC113335_7(AC113335|pid:none) Genomic sequence for Oryza sativa ...   181   7e-45
(Q40271) RecName: Full=Inositol-3-phosphate synthase;          E...   181   9e-45
EU976978_1(EU976978|pid:none) Zea mays clone 995301 unknown mRNA.     181   9e-45
(Q9FPK7) RecName: Full=Inositol-3-phosphate synthase;          E...   181   9e-45
EU961709_1(EU961709|pid:none) Zea mays clone 237754 inositol-3-p...   181   9e-45
AB236829_1(AB236829|pid:none) Trifolium pratense RNA for putativ...   180   2e-44
CP001574_495(CP001574|pid:none) Micromonas sp. RCC299 chromosome...   180   2e-44
FJ647022_1(FJ647022|pid:none) Phaseolus vulgaris myo-inositol ph...   180   2e-44
AY043320_1(AY043320|pid:none) Branchiostoma belcheri myo-inosito...   179   3e-44
FJ237300_1(FJ237300|pid:none) Oryza coarctata inositol-1-phospha...   179   3e-44

 psg: 0.74  gvh: 0.66  alm: 0.26  top: 0.73  tms: 0.07  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.23  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 1.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 44.0 %: nuclear
	 28.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: Golgi
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for SLA185 is nuc

>SLA185Z.Seq
----------CCCATACGTAGGTGATTCAAAGAGAGCTATGGATGAATATACCTCACAAA
TCTTTATGGGTGGTCACAATACAATCGTTCTCCACAACACTTGTGAAGATTCTTTATTAG
CCGCTCCAATTATTTTAGATTTAGTTATTCTTGCTGAAGTTACTAGTCGTATCACAATGA
AAAAACAAGATGATGATCAATTTGCTACTTTCCATCCAGNTTTATCATTATTATCATACC
TCCTTAAAGCCCCAATTGTTCCAAAACATGCTACCGTTGTAAATGCACTCTTCAAACAAA
GAGCCTGCATAGAAAATATCTTCAAAGCATGCGTTGGTATCGCTCCAGATAATAACATGT
TATTAGAACAAAGATTATAAATAATACAAACAATTTCAATAATAATAACATTTATTTAAA
AAATAACTTCCATTTATAATAAAATAATCTTTTGTAAAATTTAATAACTCTAAAAAAAAA
AAAAAAAAAAAAAAAAATTAAAAAAAAAATTA