>SLA148 (SLA148Q) /CSM/SL/SLA1-B/SLA148Q.Seq.d/
XXXXXXXXXXCCCGTCCAGGTGACAATGTAGGTTTCAACGTTAAAAACGTTTCAGTCAAA
GAAATTAAAAGAGGTATGGTCGCTGGTGACTCCAAAAACGATCCACCACAAGAAACTGAA
AAATTCGTTGCTCAAGTTATCGTCCTCAACCATCCAGGTCAAATCCATGCTGGTTACTCA
CCAGTCTTAGATTGTCACACTGCTCACATTGCCTGTAAATTCACTGAAATCGTCGATAAA
GTTGATCGTCGTACTGGTGCCGTCGTTGCCAAAGAAGGTACTGCCGCCGTCGTCTTAAAG
AATGGTGATGCCGCTATGGTCGAATTAACCCCATCTCGTCCAATGTGTGTTGAATCCTTC
ACTGAATACCCACCATTAGGTCGTTTCGCCGTCAGAGATATGAGACAAACCGTCGCCGTC
GGTGTCATCAAATCAACCGTCAAGAAAGCCCCAGGTAAAGCCGGTGATAAGAAAGGTGCT
GCTGCCCCATCAAAAAAGAAATAAATAAATAATATTTCTTAATAAATAGCATTTTATAAT
AATTTTAAAAA

---RPGDNVGFNVKNVSVKEIKRGMVAGDSKNDPPQETEKFVAQVIVLNHPGQIHAGYSP
VLDCHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELTPSRPMCVESFT
EYPPLGRFAVRDMRQTVAVGVIKSTVKKAPGKAGDKKGAAAPSKKK*innis**iafynn
fk

Frame A:
---psr*qcrfqr*krfsqrn*krygrw*lqkrsttrn*kircssyrpqpsrsnpcwllt
slrlshcshcl*ih*nrr*s*ssywcrrcqrrycrrrlkew*crygrinpissnvc*ilh
*iptirsfrrqryetnrrrrchqinrqespr*sr**ercccpikkeink*yflinsil**
f*k


Frame B:
---RPGDNVGFNVKNVSVKEIKRGMVAGDSKNDPPQETEKFVAQVIVLNHPGQIHAGYSP
VLDCHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELTPSRPMCVESFT
EYPPLGRFAVRDMRQTVAVGVIKSTVKKAPGKAGDKKGAAAPSKKK*innis**iafynn
fk


Frame C:
---vqvtm*vstlktfqskklkevwslvtpktihhkklknsllklssstiqvksmlvthq
s*ivtlltlpvnslkssiklivvlvpslpkkvlppss*rmvmplwsn*phlvqcvlnpsl
nthh*vvspsei*dkpspsvssnqpsrkpqvkpvirkvllphqkrnk*iiflnk*hfiii
lk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSE380 (VSE380Q) /CSM/VS/VSE3-D/VSE380Q.Seq.d/                        952   0.0
VSD740 (VSD740Q) /CSM/VS/VSD7-B/VSD740Q.Seq.d/                        952   0.0
VSD380 (VSD380Q) /CSM/VS/VSD3-D/VSD380Q.Seq.d/                        952   0.0
VSD312 (VSD312Q) /CSM/VS/VSD3-A/VSD312Q.Seq.d/                        952   0.0
VFO616 (VFO616Q) /CSM/VF/VFO6-A/VFO616Q.Seq.d/                        952   0.0
VFO348 (VFO348Q) /CSM/VF/VFO3-B/VFO348Q.Seq.d/                        952   0.0
VFN666 (VFN666Q) /CSM/VF/VFN6-C/VFN666Q.Seq.d/                        952   0.0
VFN474 (VFN474Q) /CSM/VF/VFN4-D/VFN474Q.Seq.d/                        952   0.0
VFN472 (VFN472Q) /CSM/VF/VFN4-C/VFN472Q.Seq.d/                        952   0.0
VFN448 (VFN448Q) /CSM/VF/VFN4-B/VFN448Q.Seq.d/                        952   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X55973|X55973.1 D. discoideum EF1-I gene for elongation factor 1 alpha.   952   0.0    1
X55972|X55972.1 D. discoideum EF1-II gene for elongation factor 1 alpha.   904   0.0    1
AF016242|AF016242.1 Dictyostelium discoideum protein synthesis elongation factor 1-alpha (tef2) gene, partial cds.   733   0.0    1
M29935|M29935.1 C.albicans elongation factor 1-alpha (TEF-2) gene, complete cds.   117   3e-68  4
M29934|M29934.1 C.albicans elongation factor 1-alpha (TEF-1) gene, complete cds.   117   3e-68  4
AL409155|AL409155.1 T7 end of clone AV0AA013A10 of library AV0AA from strain CBS 379 of Saccharomyces exiguus.   101   2e-56  4
AL408145|AL408145.1 T7 end of clone AV0AA006G11 of library AV0AA from strain CBS 379 of Saccharomyces exiguus.   101   6e-56  4
AX109696|AX109696.1 Sequence 429 from Patent WO0123604.           105   1e-55  4
AX109677|AX109677.1 Sequence 410 from Patent WO0123604.           101   1e-55  4
AX109678|AX109678.1 Sequence 411 from Patent WO0123604.           101   1e-55  4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X55973_1(X55973|pid:none) D. discoideum EF1-I gene for elongatio...   289   4e-77
X55972_1(X55972|pid:none) D. discoideum EF1-II gene for elongati...   289   4e-77
(P18624) RecName: Full=Elongation factor 1-alpha;          Short...   289   4e-77
AJ581004_1(AJ581004|pid:none) Axinella verrucosa mRNA for elonga...   221   9e-57
AY542532_1(AY542532|pid:none) Cladonema radiatum translation elo...   220   2e-56
AY643820_1(AY643820|pid:none) Arcyria denudata elongation factor...   220   2e-56
(Q00251) RecName: Full=Elongation factor 1-alpha;          Short...   220   2e-56
(P40911) RecName: Full=Elongation factor 1-alpha;          Short...   219   4e-56
AB326305_1(AB326305|pid:none) Solea senegalensis SseEF1A4 mRNA f...   219   5e-56
Y09023_1(Y09023|pid:none) G.cydonium mRNA for elongation factor ...   219   5e-56

 psg: 0.53  gvh: 0.50  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.24  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 36.0 %: nuclear
	 16.0 %: mitochondrial
	  4.0 %: extracellular, including cell wall
	  4.0 %: peroxisomal

>> prediction for SLA148 is cyt

>SLA148Z.Seq
----------CCCGTCCAGGTGACAATGTAGGTTTCAACGTTAAAAACGTTTCAGTCAAA
GAAATTAAAAGAGGTATGGTCGCTGGTGACTCCAAAAACGATCCACCACAAGAAACTGAA
AAATTCGTTGCTCAAGTTATCGTCCTCAACCATCCAGGTCAAATCCATGCTGGTTACTCA
CCAGTCTTAGATTGTCACACTGCTCACATTGCCTGTAAATTCACTGAAATCGTCGATAAA
GTTGATCGTCGTACTGGTGCCGTCGTTGCCAAAGAAGGTACTGCCGCCGTCGTCTTAAAG
AATGGTGATGCCGCTATGGTCGAATTAACCCCATCTCGTCCAATGTGTGTTGAATCCTTC
ACTGAATACCCACCATTAGGTCGTTTCGCCGTCAGAGATATGAGACAAACCGTCGCCGTC
GGTGTCATCAAATCAACCGTCAAGAAAGCCCCAGGTAAAGCCGGTGATAAGAAAGGTGCT
GCTGCCCCATCAAAAAAGAAATAAATAAATAATATTTCTTAATAAATAGCATTTTATAAT
AATTTTAAAAA