>SLA137 (SLA137Q) /CSM/SL/SLA1-B/SLA137Q.Seq.d/
XXXXXXXXXXAAAGCATGGGTTGATGAAAATGGTGGTGGTACAATGATTCCAGTTTCAGT
AAGTTTTGAAAAAGCTTTATTGGATTTATCTTCAGATGATGAAAGAAAAGCATATGAAAA
AGAAACAGGTGCAGTTAGTATTATGCCAAAAATCATTAAAACTGGTTACAGCACATTAAA
TCTCATCAATTTCTTTACATGTGGTAAAGATGAAGTTAGAAGTTGGTGTTTACAAAAAGG
TAACAAAGCTCCACAAGCTGCTGGTGTCATTCACACTGATTTCGAAAAAGGTTTCATTAT
GGCTGAAACTATGGCTTATTCTGACTTTTTCGAATTAAAATCTGAAGCTGAATGTAAATC
AAGAGGAAAATATAGAATGGAAGGTAAAAACTATGAAGTTGTTGATGGTGATATTATTTT
CTTCAAATTCAACGTATCAAATAATAAGAAAAAATAAATAAATAAATTAAAATAAATAAA
AAAATAAAAAAAAAAAAAAAA

---AWVDENGGGTMIPVSVSFEKALLDLSSDDERKAYEKETGAVSIMPKIIKTGYSTLNL
INFFTCGKDEVRSWCLQKGNKAPQAAGVIHTDFEKGFIMAETMAYSDFFELKSEAECKSR
GKYRMEGKNYEVVDGDIIFFKFNVSNNKKK*inklk*ikk*kkkk

Frame A:
---khglmkmvvvq*fqfq*vlkklywiylqmmkekhmkkkqvqlvlcqkslklvtah*i
ssislhvvkmklevgvykkvtklhkllvsftliskkvslwlklwliltfsn*nlklnvnq
eeniewkvktmkllmvilfssnstyqiirknk*in*nk*knkkkkk


Frame B:
---smg**kwwwyndssfskf*ksfigfifr**kksi*krnrcs*yyaknh*nwlqhiks
hqflymw*r*s*klvftkr*qsstscwchsh*frkrfhyg*nyglf*lfriki*s*m*ik
rki*ngr*kl*sc*w*yyflqiqrik**ekink*ikinkkikkkkk


Frame C:
---AWVDENGGGTMIPVSVSFEKALLDLSSDDERKAYEKETGAVSIMPKIIKTGYSTLNL
INFFTCGKDEVRSWCLQKGNKAPQAAGVIHTDFEKGFIMAETMAYSDFFELKSEAECKSR
GKYRMEGKNYEVVDGDIIFFKFNVSNNKKK*inklk*ikk*kkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLA137 (SLA137Q) /CSM/SL/SLA1-B/SLA137Q.Seq.d/                        848   0.0
VFI192 (VFI192Q) /CSM/VF/VFI1-D/VFI192Q.Seq.d/                        841   0.0
VFF551 (VFF551Q) /CSM/VF/VFF5-C/VFF551Q.Seq.d/                        841   0.0
VFE271 (VFE271Q) /CSM/VF/VFE2-C/VFE271Q.Seq.d/                        841   0.0
VFC844 (VFC844Q) /CSM/VF/VFC8-B/VFC844Q.Seq.d/                        841   0.0
FC-AX17 (FC-AX17Q) /CSM/FC/FC-AX/FC-AX17Q.Seq.d/                      841   0.0
CFH382 (CFH382Q) /CSM/CF/CFH3-D/CFH382Q.Seq.d/                        841   0.0
CFF767 (CFF767Q) /CSM/CF/CFF7-C/CFF767Q.Seq.d/                        841   0.0
VFM825 (VFM825Q) /CSM/VF/VFM8-B/VFM825Q.Seq.d/                        835   0.0
VFF322 (VFF322Q) /CSM/VF/VFF3-A/VFF322Q.Seq.d/                        835   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

CD080433|CD080433.1 MA3-9999U-M309-H09-U.B MA3-0001 Schistosoma mansoni cDNA cloneMA3-9999U-M309-H09.B, mRNA sequence.    44   2e-11  3
BF936899|BF936899.1 EST459954 Schistosoma mansoni female, Phil LoVerde/Joe Merrick Schistosoma mansoni cDNA clone SMFCC91 5' end, mRNA sequence.    44   2e-11  3
CD114066|CD114066.1 ME1-0032P-A116-F12-U.G ME1-0032 Schistosoma mansoni cDNA clone ME1-0032P-A116-F12.G, mRNA sequence.    44   2e-11  3
AI975066|AI975066.1 EST269660 Schistosoma mansoni female, Phil LoVerde/Joe Merrick Schistosoma mansoni cDNA clone SMFAM41 5' end, mRNA sequence.    44   2e-11  3
CD120224|CD120224.1 ME1-0060T-D149-F02-U.G ME1-0060 Schistosoma mansoni cDNA clone ME1-0060T-D149-F02.G, mRNA sequence.    44   2e-11  3
BI863769|BI863769.1 kx48b08.y1 Parastrongyloides trichosuri FL pAMP1 v1 Chiapelli McCarter Parastrongyloides trichosuri cDNA 5' similar to SW:YCHF_CAEEL P91917 PUTATIVE GTP-BINDING PROTEIN W08E3.3. [1] ;, mRNA sequence.    70   2e-10  2
AV099978|AV099978.1 Mus musculus ES cell cDNA, partial sequence, clone 2410052E11.    54   5e-10  2
BB360855|BB360855.1 Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130001B02, 3' end partial sequence, similar to ddbj:AF078868 Homo sapiens homologous yeast-44.2 protein mRNA.    54   6e-10  2
AV302971|AV302971.1 Mus musculus 8 days embryo cDNA, RIKEN full-length enriched library, clone:5730508A14, 3' end partial sequence.    54   8e-10  2
CD120268|CD120268.1 ME1-0060T-D150-C08-U.G ME1-0060 Schistosoma mansoni cDNA clone ME1-0060T-D150-C08.G, mRNA sequence.    44   1e-09  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP001326_559(CP001326|pid:none) Micromonas sp. RCC299 chromosome...   160   2e-38
AL844506_219(AL844506|pid:none) Plasmodium falciparum 3D7 chromo...   152   5e-36
(P91917) RecName: Full=Putative GTP-binding protein tag-210;  &T...   149   3e-35
AP008214_456(AP008214|pid:none) Oryza sativa (japonica cultivar-...   148   6e-35
CP000589_33(CP000589|pid:none) Ostreococcus lucimarinus CCE9901 ...   147   1e-34
CP000596_68(CP000596|pid:none) Ostreococcus lucimarinus CCE9901 ...   147   1e-34
AE014298_1420(AE014298|pid:none) Drosophila melanogaster chromos...   146   2e-34
BT040728_1(BT040728|pid:none) Zea mays full-length cDNA clone ZM...   146   2e-34
(Q7ZWM6) RecName: Full=Obg-like ATPase 1;          EC=3.6.3.-;  ...   146   3e-34
(Q5ZM25) RecName: Full=Obg-like ATPase 1;          EC=3.6.3.-;  ...   145   4e-34

 psg: 0.75  gvh: 0.35  alm: 0.46  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 40.0 %: nuclear
	  8.0 %: vacuolar
	  8.0 %: mitochondrial
	  4.0 %: peroxisomal

>> prediction for SLA137 is cyt

>SLA137Z.Seq
----------AAAGCATGGGTTGATGAAAATGGTGGTGGTACAATGATTCCAGTTTCAGT
AAGTTTTGAAAAAGCTTTATTGGATTTATCTTCAGATGATGAAAGAAAAGCATATGAAAA
AGAAACAGGTGCAGTTAGTATTATGCCAAAAATCATTAAAACTGGTTACAGCACATTAAA
TCTCATCAATTTCTTTACATGTGGTAAAGATGAAGTTAGAAGTTGGTGTTTACAAAAAGG
TAACAAAGCTCCACAAGCTGCTGGTGTCATTCACACTGATTTCGAAAAAGGTTTCATTAT
GGCTGAAACTATGGCTTATTCTGACTTTTTCGAATTAAAATCTGAAGCTGAATGTAAATC
AAGAGGAAAATATAGAATGGAAGGTAAAAACTATGAAGTTGTTGATGGTGATATTATTTT
CTTCAAATTCAACGTATCAAATAATAAGAAAAAATAAATAAATAAATTAAAATAAATAAA
AAAATAAAAAAAAAAAAAAAA