>SHL861 (SHL861Q) /CSM/SH/SHL8-C/SHL861Q.Seq.d/
XXXXXXXXXXTCTCTCAACATATTTCAACCGCTGGTACTGAAGCATCTGGTACAAGTAAT
ATGAAATTCAGTATGAATGGTGGTCTTATCATTGGTACTTTGGATGGTGCAAACATTGAA
ATTCGTGATGCCATTGGTCATGAAAATATGTACATCTTTGGTGCTCGTTCTGAAGAGGTC
AACAAAGTAAAGAAAATTATTCATGATGGAAAATTCACACCAGACACTAGATGGGCTCGT
GTTTTAACCGCTATTAAAGAAGATACTTTTGGTCCACATGAACAATTCCAAGATATTATC
AACTCTGTTAGTGGTGGCAATGATCATTACATTCTTAGTTATGATTTTGGTTCTTACTTG
GATATTCAAAATTCAATTGATCAAGATTTCAAAGATAGAGCTAAATGGGCTAAAAAATCA
ATTATGGCTTCAGTTTGTTGTGGTAAATTCAGTTCAGATAGAACCATTAAAGAGTATGCT
CAACAAATTTGGGGTATTGAAGAATGGAAGAGACCAGGTCCAGTTCCAGTTTCAAATGAA
GAAGCTCGTTCTTTATCAGTTCCACCACCATCTGGTTCACCAAATGATATCAATGCTATC
TCAATTGAAAGATT

---SQHISTAGTEASGTSNMKFSMNGGLIIGTLDGANIEIRDAIGHENMYIFGARSEEVN
KVKKIIHDGKFTPDTRWARVLTAIKEDTFGPHEQFQDIINSVSGGNDHYILSYDFGSYLD
IQNSIDQDFKDRAKWAKKSIMASVCCGKFSSDRTIKEYAQQIWGIEEWKRPGPVPVSNEE
ARSLSVPPPSGSPNDINAISIER

Frame A:
---lstyfnrwy*siwyk*yeiqyewwsyhwyfgwckh*ns*chws*kyvhlwcsf*rgq
qskenys*wkihtrh*mgscfnry*rryfwst*tipryyqlc*wwq*slhs*l*fwfllg
yskfn*srfqr*s*mg*kinygfsllw*iqfr*nh*rvcstnlgy*rmeetrssssfk*r
ssffissttiwftk*yqcyln*ki


Frame B:
---SQHISTAGTEASGTSNMKFSMNGGLIIGTLDGANIEIRDAIGHENMYIFGARSEEVN
KVKKIIHDGKFTPDTRWARVLTAIKEDTFGPHEQFQDIINSVSGGNDHYILSYDFGSYLD
IQNSIDQDFKDRAKWAKKSIMASVCCGKFSSDRTIKEYAQQIWGIEEWKRPGPVPVSNEE
ARSLSVPPPSGSPNDINAISIER


Frame C:
---lnifqplvlkhlvqvi*nsv*mvvlslvlwmvqtlkfvmplvmkictslvlvlkrst
k*rklfmmenshqtldglvf*pllkkillvhmnnskilstllvvamiitflvmilvltwi
fkiqlikiskielnglknqlwlqfvvvnsvqieplksmlnkfgvlkngrdqvqfqfqmkk
lvlyqfhhhlvhqmismlsqlkd

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHL861 (SHL861Q) /CSM/SH/SHL8-C/SHL861Q.Seq.d/                       1197   0.0
SHL889 (SHL889Q) /CSM/SH/SHL8-D/SHL889Q.Seq.d/                       1189   0.0
SHJ645 (SHJ645Q) /CSM/SH/SHJ6-B/SHJ645Q.Seq.d/                       1189   0.0
SHG849 (SHG849Q) /CSM/SH/SHG8-C/SHG849Q.Seq.d/                       1189   0.0
SHG256 (SHG256Q) /CSM/SH/SHG2-C/SHG256Q.Seq.d/                       1189   0.0
SHF119 (SHF119Q) /CSM/SH/SHF1-A/SHF119Q.Seq.d/                       1189   0.0
SHB262 (SHB262Q) /CSM/SH/SHB2-C/SHB262Q.Seq.d/                       1189   0.0
SHA869 (SHA869Q) /CSM/SH/SHA8-C/SHA869Q.Seq.d/                       1189   0.0
SHA835 (SHA835Q) /CSM/SH/SHA8-B/SHA835Q.Seq.d/                       1189   0.0
SHA643 (SHA643Q) /CSM/SH/SHA6-B/SHA643Q.Seq.d/                       1189   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

M77492|M77492.1 Dictyostelium discoideum glycoprotein phosphorylase 2 (glpD) gene, complete cds.  1189   0.0    1
X62142|X62142.1 D. discoideum glpV gene for glycogen phosphorylase 1.   127   2e-27  3
BX538351|BX538351.1 Cryptosporidium parvum chromosome 6, complete sequence; segment 2/4.    78   2e-19  2
DY887127|DY887127.1 CeleSEQ3027 Cunninghamella elegans pBluescript (EcoRI-XhoI) Cunninghamella elegans cDNA clone CeleSEQ3027, mRNA sequence.    60   9e-15  2
DY891546|DY891546.1 CeleSEQ10267 Cunninghamella elegans pBluescript (EcoRI-XhoI) Cunninghamella elegans cDNA clone CeleSEQ10267, mRNA sequence.    60   9e-15  2
DY894970|DY894970.1 CeleSEQ14670 Cunninghamella elegans pBluescript (EcoRI-XhoI) Cunninghamella elegans cDNA clone CeleSEQ14670, mRNA sequence.    60   9e-15  2
EH431847|EH431847.1 NPE00000861 Neocallimastix patriciarum ZAP II cDNA library Neocallimastix patriciarum cDNA, mRNA sequence.    48   2e-09  2
AY635994|AY635994.1 Monacrosporium haptotylum glycogen phosphorylase-like protein (Gph1) mRNA, complete cds.    68   3e-07  1
DY890707|DY890707.1 CeleSEQ9917 Cunninghamella elegans pBluescript (EcoRI-XhoI) Cunninghamella elegans cDNA clone CeleSEQ9917, mRNA sequence.    56   1e-06  2
EH431298|EH431298.1 NPE00000022 Neocallimastix patriciarum ZAP II cDNA library Neocallimastix patriciarum cDNA, mRNA sequence.    42   1e-06  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU165056_1(EU165056|pid:none) Cyanophora paradoxa starch phospho...   179   7e-44
AY098895_1(AY098895|pid:none) Citrus hybrid cultivar starch phos...   178   9e-44
(Q9SD76) RecName: Full=Alpha-glucan phosphorylase, H isozyme;   ...   173   3e-42
AK103367_1(AK103367|pid:none) Oryza sativa Japonica Group cDNA c...   172   7e-42
AF326977_1(AF326977|pid:none) Oryza sativa alpha 1,4-glucan phos...   172   7e-42
EF576564_1(EF576564|pid:none) Oryza sativa (indica cultivar-grou...   172   7e-42
(P32811) RecName: Full=Alpha-glucan phosphorylase, H isozyme;   ...   171   1e-41
CP001330_331(CP001330|pid:none) Micromonas sp. RCC299 chromosome...   171   1e-41
CR954204_212(CR954204|pid:none) Ostreococcus tauri strain OTTH05...   171   1e-41
DQ279079_1(DQ279079|pid:none) Chlamydomonas reinhardtii PhoA (PH...   171   1e-41

 psg: 0.75  gvh: 0.38  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.18  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 36.0 %: nuclear
	  8.0 %: cytoskeletal
	  4.0 %: mitochondrial

>> prediction for SHL861 is cyt

>SHL861Z.Seq
NNNNNNNNNNTCTCTCAACATATTTCAACCGCTGGTACTGAAGCATCTGGTACAAGTAAT
ATGAAATTCAGTATGAATGGTGGTCTTATCATTGGTACTTTGGATGGTGCAAACATTGAA
ATTCGTGATGCCATTGGTCATGAAAATATGTACATCTTTGGTGCTCGTTCTGAAGAGGTC
AACAAAGTAAAGAAAATTATTCATGATGGAAAATTCACACCAGACACTAGATGGGCTCGT
GTTTTAACCGCTATTAAAGAAGATACTTTTGGTCCACATGAACAATTCCAAGATATTATC
AACTCTGTTAGTGGTGGCAATGATCATTACATTCTTAGTTATGATTTTGGTTCTTACTTG
GATATTCAAAATTCAATTGATCAAGATTTCAAAGATAGAGCTAAATGGGCTAAAAAATCA
ATTATGGCTTCAGTTTGTTGTGGTAAATTCAGTTCAGATAGAACCATTAAAGAGTATGCT
CAACAAATTTGGGGTATTGAAGAATGGAAGAGACCAGGTCCAGTTCCAGTTTCAAATGAA
GAAGCTCGTTCTTTATCAGTTCCACCACCATCTGGTTCACCAAATGATATCAATGCTATC
TCAATTGAAAGATT