>SHL750 (SHL750Q) /CSM/SH/SHL7-C/SHL750Q.Seq.d/
AAATAATAAATTTACTATCAAATAACTATTTTTTCTTTTCTTTCTTTTTAAAGTTTAAAT
AATAGAAATAATAAAAATTAATATTAAAAAAAAGGAACGTTAAAAAAAAAAXXXXXXXXX
XCTGTAAACTCTCATAAGATTGTAACTCAAATGGGAAATGTTGAAAATAATGAAATTACC
AATGAACAAGATGCCATTGAACAAGCTCAACATTTACAACGTATTGAAAATGGTGAAGAT
ATCGATGAGTATGAAGCTGCCCAACATGAAGTTGCCTTTTTAGATGAAAATGAACAAGAT
GCTGCTAAATTACAAAATGAAATGGACCAATTAGAACTCTTACTTGAAGAGAATGAAGAA
GAACAATTTTCAAATAAAAATTTACAACAACTTAATGAGAATGAAAATCAACAACAACAA
CAAGGACAACAACAAGTTCAAGCAACAAATGTTGAACAACAAATCGTTGAACAACTTAAA
GTTATCAAAGAATTTCAAAGACAAGATCAACAAAAGAAACAAAAAATTCAACAAGAGAAC
GATGCTGTCTACTTGAGTGATGTTGAAAAAGCTCAACTTGAATTGGATGCTGAATTGGCT
AAAAATAATAAACAAGAGAATCAAGATGAGAATTTAGTTCAAGAGAAACAACAATCTCCT
GACCAAATTAAAAATCAATTAAAAAATATTCAACATGAACAACAAATCCAAGAACAACAA
GATAAATTAAATCAAGAAAAAAATCAACAATTATTAGAACAAGAACAAAATCAAAAATAA
TTTAATCATTCTTTNCTTTTTAAAAAACTAATCAATTAAAAAA

iinllsnnyfffsfflkfk**k**KLILKKRNVKKK---

---VNSHKIVTQMGNVENNEITNEQDAIEQAQHLQRIENGEDIDEYEAAQHEVAFLDENE
QDAAKLQNEMDQLELLLEENEEEQFSNKNLQQLNENENQQQQQGQQQVQATNVEQQIVEQ
LKVIKEFQRQDQQKKQKIQQENDAVYLSDVEKAQLELDAELAKNNKQENQDENLVQEKQQ
SPDQIKNQLKNIQHEQQIQEQQDKLNQEKNQQLLEQEQNQK*fnhsxlfkklin*k

Frame A:
k**iyyqitifsflsf*slnnrnnkn*y*kkgtlkkk---

---l*tlirl*lkwemlkimklpmnkmplnklniynvlkmvkismsmklpnmklpf*mkm
nkmllnykmkwtn*nsylkrmkknnfqikiynnlmrmkinnnnkdnnkfkqqmlnnksln
nlklsknfkdkinkrnkkfnkrtmlst*vmlkklnlnwmlnwlkiinkrikmri*fkrnn
nlltklkin*kifnmnnksknnkin*ikkkinny*nknkiknnliilxflkn*sikk

Frame B:
nnkftik*lfflfflfkv*iieiikinikkker*kk---

---ckls*dcnsngkc*k**nyq*trch*tsstftty*kw*ryr*v*scpt*sclfr*k*
trcc*itk*ngpirtlt*re*rrtifk*kfttt**e*ksttttrtttsssnkc*ttnr*t
t*syqrisktrstketknstrercclle*c*ksst*igc*ig*k**tresr*efssrett
is*pn*ksikkyst*ttnprttr*iksrkkstiirtrtkskii*sffxf*ktnqlk

Frame C:
iinllsnnyfffsfflkfk**k**KLILKKRNVKKK---

---VNSHKIVTQMGNVENNEITNEQDAIEQAQHLQRIENGEDIDEYEAAQHEVAFLDENE
QDAAKLQNEMDQLELLLEENEEEQFSNKNLQQLNENENQQQQQGQQQVQATNVEQQIVEQ
LKVIKEFQRQDQQKKQKIQQENDAVYLSDVEKAQLELDAELAKNNKQENQDENLVQEKQQ
SPDQIKNQLKNIQHEQQIQEQQDKLNQEKNQQLLEQEQNQK*fnhsxlfkklin*k

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHL750 (SHL750Q) /CSM/SH/SHL7-C/SHL750Q.Seq.d/                        668   0.0
SLI655 (SLI655Q) /CSM/SL/SLI6-C/SLI655Q.Seq.d/                        658   0.0
SLH374 (SLH374Q) /CSM/SL/SLH3-D/SLH374Q.Seq.d/                        658   0.0
SLH142 (SLH142Q) /CSM/SL/SLH1-B/SLH142Q.Seq.d/                        658   0.0
SHA160 (SHA160Q) /CSM/SH/SHA1-C/SHA160Q.Seq.d/                        658   0.0
CHK752 (CHK752Q) /CSM/CH/CHK7-C/CHK752Q.Seq.d/                        658   0.0
SLC743 (SLC743Q) /CSM/SL/SLC7-B/SLC743Q.Seq.d/                        656   0.0
SLB365 (SLB365Q) /CSM/SL/SLB3-C/SLB365Q.Seq.d/                        654   0.0
SHA671 (SHA671Q) /CSM/SH/SHA6-C/SHA671Q.Seq.d/                        654   0.0
SLG381 (SLG381Q) /CSM/SL/SLG3-D/SLG381Q.Seq.d/                        652   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U25143|U25143.1 Dictyostelium discoideum cAMP-inducible prespore protein gene, complete cds.   569   0.0    4
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence.   127   5e-25  1
EH013857|EH013857.1 USDA-FP_186616 Lysiphlebus testaceipes adult whole body Lysiphlebus testaceipes cDNA clone WLt063_D02 5', mRNA sequence.    40   0.20   3
AC117070|AC117070.2 Dictyostelium discoideum chromosome 2 map 2097701-2233941 strain AX4, complete sequence.    34   0.33   7
EG609925|EG609925.1 BRAINF100765M9 POSSUM_01-POSSUM-C-BRAIN-2KB Trichosurus vulpecula cDNA clone 1061029269751, mRNA sequence.    38   0.35   3
DT633626|DT633626.1 EST1148557 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMFW90 3' end, mRNA sequence.    48   0.37   1
DR686823|DR686823.1 EST1076901 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWABK24 3' end, mRNA sequence.    48   0.37   1
BQ699661|BQ699661.1 NXRV125_B09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV125_B09 5', mRNA sequence.    48   0.37   1
BP290409|BP290409.1 Homo sapiens cDNA clone: LNF05006, Sugano cDNA library, expressed in lung normal fibroblast, 5'-EST.    48   0.37   1
AC124708|AC124708.2 Mus musculus BAC clone RP24-79O16 from 6, complete sequence.    48   0.37   1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P54682) RecName: Full=cAMP-inducible prespore protein D7; Flags...   229   8e-59
AF314648_2(AF314648|pid:none) Plasmodium vivax CG9 (cg9) gene, c...    35   2.2
(Q54F33) RecName: Full=Uncharacterized protein DDB_G0291143;           35   3.7
CP000806_1851(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu...    33   8.3

 psg: 0.58  gvh: 0.16  alm: 0.58  top: 0.53  tms: 0.00  mit: 0.35  mip: 0.03
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.50  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: nuclear
	 28.0 %: cytoplasmic
	 16.0 %: mitochondrial
	  4.0 %: plasma membrane

>> prediction for SHL750 is nuc

>SHL750F.Seq
AAATAATAAATTTACTATCAAATAACTATTTTTTCTTTTCTTTCTTTTTAAAGTTTAAAT
AATAGAAATAATAAAAATTAATATTAAAAAAAAGGAACGTTAAAAAAAAAANNNNNNNNN
N

>SHL750Z.Seq
NNNNNNNNNNCTGTAAACTCTCATAAGATTGTAACTCAAATGGGAAATGTTGAAAATAAT
GAAATTACCAATGAACAAGATGCCATTGAACAAGCTCAACATTTACAACGTATTGAAAAT
GGTGAAGATATCGATGAGTATGAAGCTGCCCAACATGAAGTTGCCTTTTTAGATGAAAAT
GAACAAGATGCTGCTAAATTACAAAATGAAATGGACCAATTAGAACTCTTACTTGAAGAG
AATGAAGAAGAACAATTTTCAAATAAAAATTTACAACAACTTAATGAGAATGAAAATCAA
CAACAACAACAAGGACAACAACAAGTTCAAGCAACAAATGTTGAACAACAAATCGTTGAA
CAACTTAAAGTTATCAAAGAATTTCAAAGACAAGATCAACAAAAGAAACAAAAAATTCAA
CAAGAGAACGATGCTGTCTACTTGAGTGATGTTGAAAAAGCTCAACTTGAATTGGATGCT
GAATTGGCTAAAAATAATAAACAAGAGAATCAAGATGAGAATTTAGTTCAAGAGAAACAA
CAATCTCCTGACCAAATTAAAAATCAATTAAAAAATATTCAACATGAACAACAAATCCAA
GAACAACAAGATAAATTAAATCAAGAAAAAAATCAACAATTATTAGAACAAGAACAAAAT
CAAAAATAATTTAATCATTCTTTNCTTTTTAAAAAACTAATCAATTAAAAAA

>SHL750P.Seq
AAATAATAAATTTACTATCAAATAACTATTTTTTCTTTTCTTTCTTTTTAAAGTTTAAAT
AATAGAAATAATAAAAATTAATATTAAAAAAAAGGAACGTTAAAAAAAAAA---------
-CTGTAAACTCTCATAAGATTGTAACTCAAATGGGAAATGTTGAAAATAATGAAATTACC
AATGAACAAGATGCCATTGAACAAGCTCAACATTTACAACGTATTGAAAATGGTGAAGAT
ATCGATGAGTATGAAGCTGCCCAACATGAAGTTGCCTTTTTAGATGAAAATGAACAAGAT
GCTGCTAAATTACAAAATGAAATGGACCAATTAGAACTCTTACTTGAAGAGAATGAAGAA
GAACAATTTTCAAATAAAAATTTACAACAACTTAATGAGAATGAAAATCAACAACAACAA
CAAGGACAACAACAAGTTCAAGCAACAAATGTTGAACAACAAATCGTTGAACAACTTAAA
GTTATCAAAGAATTTCAAAGACAAGATCAACAAAAGAAACAAAAAATTCAACAAGAGAAC
GATGCTGTCTACTTGAGTGATGTTGAAAAAGCTCAACTTGAATTGGATGCTGAATTGGCT
AAAAATAATAAACAAGAGAATCAAGATGAGAATTTAGTTCAAGAGAAACAACAATCTCCT
GACCAAATTAAAAATCAATTAAAAAATATTCAACATGAACAACAAATCCAAGAACAACAA
GATAAATTAAATCAAGAAAAAAATCAACAATTATTAGAACAAGAACAAAATCAAAAATAA
TTTAATCATTCTTTNCTTTTTAAAAAACTAATCAATTAAAAAA