>SHJ262 (SHJ262Q) /CSM/SH/SHJ2-C/SHJ262Q.Seq.d/
CACATTCCAATCATGGTTTCACAATGTTCCAGGTGTGAATCTTCCAATTCAAAAAGATAT
CATTCTTACACAATCTCTTTCAAATCCAAATATTTATTCCTACAGTAATGATTCTTATTT
TGTAATTGATGGTCAAGGTTTTGATGACAAATCAGTTTATCCAAATGAAAGAGTTTATCG
TGACGCTTTTGGAAATCCACATAATTTCCACTTTTGTTTACAAGCTCATACCGAATTTCA
ATATAAAACTGGTGATGTTTTTAATTTTGCAGGTGATGATGATGTTTGGGTATTTATTAA
TAATATTTTGGTTGTGGATTTGGGAGGTATTCATACAATTGCAAGTGCAAGTGTTAACTT
GGATTTATTGGGTTTAACACCTGGACAAAATTATCCATTTGATTTCTTTTATTGTGAACG
TCACACTGTAGAATCTCATATAAGAATTGAAACATCTTTGGCATTCAAGTGTCCTCGATA
TGATGAATGTGGTGTCTGTGAAGGTGATGGTACTTCTTGTTGTACTCCAAATAATTGTGA
TAATAATCCAATTTATAGAACXXXXXXXXXX

TFQSWFHNVPGVNLPIQKDIILTQSLSNPNIYSYSNDSYFVIDGQGFDDKSVYPNERVYR
DAFGNPHNFHFCLQAHTEFQYKTGDVFNFAGDDDVWVFINNILVVDLGGIHTIASASVNL
DLLGLTPGQNYPFDFFYCERHTVESHIRIETSLAFKCPRYDECGVCEGDGTSCCTPNNCD
NNPIYR---

Frame A:
hipimvsqcsrcessnskryhsytisfkskylflq**flfcn*wsrf**qislsk*ksls
*rfwkst*fpllftssyrisi*nw*cf*fcr***clgiy**yfgcgfgrysynckckc*l
gfigfntwtklsi*flll*tshcrisykn*nifgiqvssi**mwcl*r*wyfllysk*l*
**snl*---


Frame B:
TFQSWFHNVPGVNLPIQKDIILTQSLSNPNIYSYSNDSYFVIDGQGFDDKSVYPNERVYR
DAFGNPHNFHFCLQAHTEFQYKTGDVFNFAGDDDVWVFINNILVVDLGGIHTIASASVNL
DLLGLTPGQNYPFDFFYCERHTVESHIRIETSLAFKCPRYDECGVCEGDGTSCCTPNNCD
NNPIYR---


Frame C:
hsnhgftmfqv*ifqfkkisflhnlfqiqifiptvmilil*lmvkvlmtnqfiqmkefiv
tlleihiistfvyklipnfniklvmflilqvmmmfgylliifwlwiwevfiqlqvqvltw
iywv*hldkiihlisfivnvtl*nli*elkhlwhssvldmmnvvsvkvmvllvvlqiivi
iiqfie---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHJ886 (SHJ886Q) /CSM/SH/SHJ8-D/SHJ886Q.Seq.d/                       1112   0.0
SHJ668 (SHJ668Q) /CSM/SH/SHJ6-C/SHJ668Q.Seq.d/                       1112   0.0
SHJ262 (SHJ262Q) /CSM/SH/SHJ2-C/SHJ262Q.Seq.d/                       1112   0.0
SHD437 (SHD437Q) /CSM/SH/SHD4-B/SHD437Q.Seq.d/                       1112   0.0
CHN391 (CHN391Q) /CSM/CH/CHN3-D/CHN391Q.Seq.d/                       1112   0.0
SHJ545 (SHJ545Q) /CSM/SH/SHJ5-B/SHJ545Q.Seq.d/                       1076   0.0
SHH128 (SHH128Q) /CSM/SH/SHH1-B/SHH128Q.Seq.d/                       1072   0.0
AHB752 (AHB752Q) /CSM/AH/AHB7-C/AHB752Q.Seq.d/                       1068   0.0
SHH485 (SHH485Q) /CSM/SH/SHH4-D/SHH485Q.Seq.d/                       1066   0.0
CHK811 (CHK811Q) /CSM/CH/CHK8-A/CHK811Q.Seq.d/                       1045   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U67940|U67940.1 Dictyostelium discoideum ORFveg106 mRNA, complete cds.    60   4e-13  3
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4, complete sequence.    66   1e-12  5
AB053203|AB053203.1 Dictyostelium discoideum psiA mRNA for Psi facor, complete cds.    56   3e-08  2
AJ548838|AJ548838.1 Dictyostelium discoideum dicA gene for extracellular signalling  molecule DicA, exons 1-2.    54   0.004  1
AJ548837|AJ548837.1 Dictyostelium discoideum mRNA for extracellular signalling molecule  DicA (dicA gene).    54   0.004  1
AX251444|AX251444.1 Sequence 412 from Patent WO0168912.            38   0.036  3
BD452965|BD452965.1 Diagnosis of Diseases Associated with tumor suppressor genes and oncogenes.    38   0.036  3
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    48   0.11   8
CR762473|CR762473.7 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone DKEY-189I24.    34   0.40   6
AC165409|AC165409.3 Mus musculus chromosome 18, clone RP23-90F15, complete sequence.    38   1.3    4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54C31) RecName: Full=Protein psiR; Flags: Precursor;                407   e-113
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor;                293   3e-78
(Q54FD8) RecName: Full=Protein psiD; Flags: Precursor;                221   8e-57
(Q1ZXC5) RecName: Full=Protein psiC; Flags: Precursor;                215   7e-55
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                198   9e-50
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                197   2e-49
(Q55FQ4) RecName: Full=Protein psiB; Flags: Precursor;                188   7e-47
(Q968Z6) RecName: Full=Protein psiA; AltName: Full=Prespore-cell...   183   3e-45
(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...   180   3e-44
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor;                178   1e-43

 psg: 0.83  gvh: 0.40  alm: 0.35  top: 0.53  tms: 0.00  mit: 0.30  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 32.0 %: nuclear
	 12.0 %: mitochondrial
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for SHJ262 is cyt

>SHJ262F.Seq
CACATTCCAATCATGGTTTCACAATGTTCCAGGTGTGAATCTTCCAATTCAAAAAGATAT
CATTCTTACACAATCTCTTTCAAATCCAAATATTTATTCCTACAGTAATGATTCTTATTT
TGTAATTGATGGTCAAGGTTTTGATGACAAATCAGTTTATCCAAATGAAAGAGTTTATCG
TGACGCTTTTGGAAATCCACATAATTTCCACTTTTGTTTACAAGCTCATACCGAATTTCA
ATATAAAACTGGTGATGTTTTTAATTTTGCAGGTGATGATGATGTTTGGGTATTTATTAA
TAATATTTTGGTTGTGGATTTGGGAGGTATTCATACAATTGCAAGTGCAAGTGTTAACTT
GGATTTATTGGGTTTAACACCTGGACAAAATTATCCATTTGATTTCTTTTATTGTGAACG
TCACACTGTAGAATCTCATATAAGAATTGAAACATCTTTGGCATTCAAGTGTCCTCGATA
TGATGAATGTGGTGTCTGTGAAGGTGATGGTACTTCTTGTTGTACTCCAAATAATTGTGA
TAATAATCCAATTTATAGAACNNNNNNNNNN