>SHJ241 (SHJ241Q) /CSM/SH/SHJ2-B/SHJ241Q.Seq.d/
ATATTATTATTATTTATTTTTTTTTTTTAAAATTATTTATATGTATATTTTTTTTNGTTN
ATTAAAAAATTTTAATTATNGNATATAATATTTTTAAATATATATATTAATATATATTAA
TATATTAATATTAATAAAANGAAAATATTATNTTCATTATTATTAATATCAAGTNTAATT
TTAAATNCTGTNTTAAATATTTCATCNCAXXXXXXXXXX

illlfifff*nylyvyffxxikkf*lxxiiflniyiniy*YININKXKILXSLLLISSXI
LNXVLNISS---

Frame A:
illlfifff*nylyvyffxxikkf*lxxiiflniyiniy*YININKXKILXSLLLISSXI
LNXVLNISS---


Frame B:
yyyylffffkiiymyiffxxlknfnyxi*yf*iyiliyinililikxkyyxhyy*yqv*f
*xlx*ifhx---


Frame C:
iiiiyffflklficiffxvx*kilixxynifkyiy*yiliy*y**xenixfiiinikxnf
kxcxkyfi---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHJ874 (SHJ874Q) /CSM/SH/SHJ8-D/SHJ874Q.Seq.d/                         56   2e-07
SSG727 (SSG727Q) /CSM/SS/SSG7-B/SSG727Q.Seq.d/                         56   2e-07
SHL883 (SHL883Q) /CSM/SH/SHL8-D/SHL883Q.Seq.d/                         56   2e-07
SHL880 (SHL880Q) /CSM/SH/SHL8-D/SHL880Q.Seq.d/                         56   2e-07
SHL852 (SHL852Q) /CSM/SH/SHL8-C/SHL852Q.Seq.d/                         56   2e-07
SHL845 (SHL845Q) /CSM/SH/SHL8-B/SHL845Q.Seq.d/                         56   2e-07
SHL837 (SHL837Q) /CSM/SH/SHL8-B/SHL837Q.Seq.d/                         56   2e-07
SHL833 (SHL833Q) /CSM/SH/SHL8-B/SHL833Q.Seq.d/                         56   2e-07
SHL807 (SHL807Q) /CSM/SH/SHL8-A/SHL807Q.Seq.d/                         56   2e-07

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC160338|AC160338.2 Mus musculus BAC clone RP23-261O3 from chromosome 9, complete sequence.    30   2.4    2
M81793|M81793.1 Plasmodium berghei fructosebisphosphate aldolase (ALDO-2) gene, complete cds.    32   3.1    2
BH471181|BH471181.1 BOGXT44TF BOGX Brassica oleracea genomic clone BOGXT44, DNA sequence.    30   3.2    2
BZ033718|BZ033718.1 oei01a10.b1 B.oleracea002 Brassica oleracea genomic, DNA sequence.    30   3.2    2
AZ350069|AZ350069.1 1M0087O16F Mouse 10kb plasmid UUGC1M library Mus musculus genomic clone UUGC1M0087O16 F, DNA sequence.    30   3.3    2
X94555|X94555.1 R.pomonella DNA for internal transcribed spacer ITS1 of rDNA unit.    32   3.3    2
U64633|U64633.1 Polistes bellicosus microsatellite Pbe442AAT DNA, sequence tagged site.    32   3.4    2
CR388141|CR388141.9 Zebrafish DNA sequence from clone DKEY-28J8 in linkage group 14.    32   8.6    2
BX547939|BX547939.11 Zebrafish DNA sequence from clone CH211-201M19 in linkage group 19.    30   8.6    2
CR792424|CR792424.22 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone.    30   8.7    2

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3039690
Number of Hits to DB: 27,419,975

 psg: 0.94  gvh: 0.59  alm: 0.30  top: 0.33  tms: 0.07  mit: 0.38  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.56  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 24.0 %: endoplasmic reticulum
	 16.0 %: cytoplasmic
	 16.0 %: Golgi
	 16.0 %: mitochondrial
	 16.0 %: nuclear
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system
	  4.0 %: extracellular, including cell wall

>> prediction for SHJ241 is end

>SHJ241F.Seq
ATATTATTATTATTTATTTTTTTTTTTTAAAATTATTTATATGTATATTTTTTTTNGTTN
ATTAAAAAATTTTAATTATNGNATATAATATTTTTAAATATATATATTAATATATATTAA
TATATTAATATTAATAAAANGAAAATATTATNTTCATTATTATTAATATCAAGTNTAATT
TTAAATNCTGTNTTAAATATTTCATCNCANNNNNNNNNN