>SHI893 (SHI893Q) /CSM/SH/SHI8-D/SHI893Q.Seq.d/
AAAAAAAAAATATATATATCATTAAAATAAAATTCATTTAATAATAATAATTTAATTTTT
TTCATAGTATTCAAAGATATAATGAAAAACTTTTATTATTTTATATTAATTTTATTATTT
TTTAATGAAGTTTGCTATTCATTAAAAGATGGTGAAATTAAACTTCATTTAATTCCACAT
TCACATTGTGATTCTGGATGGACATCAACAATGAACGAATATTATATGGGTCAAGTTAAA
AGTATTATATCATCAATGGTTCAATCATTAAATGTTGAATCAAATCCACCTAAAAAATTT
GTTTGGTCTGAAATTGGATTTTTAAAACAATGGTGGGATGATATGCCAATTGAAATTAAA
AATGATTTTATAAAACATGTTAAAAATGATANAATTGAATTTGTAAATGGNGGATGGGTA
ATGAATGATGAAGCATGTGCAAGTTTAAAAAGTGTAATTANACAATTATCAAATGGACAT
AAATTTATTAGAGAGAAATTTGGAAAACAACCANAGAGNGGATGGCAAATTGATCCATTT
GGACATTCATCATTGACACCAACATTACAAGCTCAXXXXXXXXXX

kkkiyislk*NSFNNNNLIFFIVFKDIMKNFYYFILILLFFNEVCYSLKDGEIKLHLIPH
SHCDSGWTSTMNEYYMGQVKSIISSMVQSLNVESNPPKKFVWSEIGFLKQWWDDMPIEIK
NDFIKHVKNDXIEFVNGGWVMNDEACASLKSVIXQLSNGHKFIREKFGKQPXXGWQIDPF
GHSSLTPTLQA---

Frame A:
kkkiyislk*NSFNNNNLIFFIVFKDIMKNFYYFILILLFFNEVCYSLKDGEIKLHLIPH
SHCDSGWTSTMNEYYMGQVKSIISSMVQSLNVESNPPKKFVWSEIGFLKQWWDDMPIEIK
NDFIKHVKNDXIEFVNGGWVMNDEACASLKSVIXQLSNGHKFIREKFGKQPXXGWQIDPF
GHSSLTPTLQA---


Frame B:
kkkyiyh*nkihliiii*ffs*yski**ktfiily*fyyflmkfaih*kmvklnfi*fhi
hivildghqq*tniiwvklkvlyhqwfnh*mlnqihlknlfglkldf*nnggmicqlklk
mil*nmlkmixlnl*mxdg**mmkhvqv*kv*lxnyqmdinllernlennxrxdgklihl
dihh*hqhykl---


Frame C:
kkniyiikikfi****fnffhsiqryneklllfyinfiif**sllfikrw*n*tsfnstf
tl*fwmdinnerilygss*kyyiingsiikc*ikst*kiclv*nwifktmvg*yan*n*k
*fyktc*k*xn*ickwxmgne**smckfkkcnxtiikwt*iy*reiwkttxexman*siw
tfiidtnits---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHI893 (SHI893Q) /CSM/SH/SHI8-D/SHI893Q.Seq.d/                        864   0.0
SHL630 (SHL630Q) /CSM/SH/SHL6-B/SHL630Q.Seq.d/                        841   0.0
SHL340 (SHL340Q) /CSM/SH/SHL3-B/SHL340Q.Seq.d/                        841   0.0
SHL334 (SHL334Q) /CSM/SH/SHL3-B/SHL334Q.Seq.d/                        841   0.0
SHL308 (SHL308Q) /CSM/SH/SHL3-A/SHL308Q.Seq.d/                        841   0.0
SHL251 (SHL251Q) /CSM/SH/SHL2-C/SHL251Q.Seq.d/                        841   0.0
SHL163 (SHL163Q) /CSM/SH/SHL1-C/SHL163Q.Seq.d/                        841   0.0
SHK566 (SHK566Q) /CSM/SH/SHK5-C/SHK566Q.Seq.d/                        841   0.0
SHK514 (SHK514Q) /CSM/SH/SHK5-A/SHK514Q.Seq.d/                        841   0.0
SHK450 (SHK450Q) /CSM/SH/SHK4-C/SHK450Q.Seq.d/                        841   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

CF445746|CF445746.1 EST682091 normalized cDNA library of onion Allium cepa cDNA cloneACAHS20, mRNA sequence.    58   2e-06  2
CF196667|CF196667.1 Ir64bi1.6_B04 IR64-BI Oryza sativa (indica cultivar-group) cDNA clone IR64-BI1.6B04 5', mRNA sequence.    54   1e-04  2
BG449666|BG449666.1 NF055D11IN1F1092 Insect herbivory Medicago truncatula cDNA clone NF055D11IN 5', mRNA sequence.    58   2e-04  1
BQ141173|BQ141173.1 NF016G07PH1F1056 Phoma-infected Medicago truncatula cDNA clone NF016G07PH 5', mRNA sequence.    58   2e-04  1
CV688215|CV688215.1 sjs2-16-2_G01_sjs2-16-2G01-T3 SJS Schistosoma japonicum cDNA, mRNA sequence.    56   0.001  1
CV682907|CV682907.1 service43_H06_sjs2-16-2B11-T3 SJS Schistosoma japonicum cDNA, mRNA sequence.    56   0.001  1
CV682854|CV682854.1 service30_G09_sjs2-14-10C09-T3 SJS Schistosoma japonicum cDNA, mRNA sequence.    56   0.001  1
BU804021|BU804021.1 SJFBFG06 SJF Schistosoma japonicum cDNA, mRNA sequence.    56   0.001  1
BU798369|BU798369.1 SJF2ADB01 SJF Schistosoma japonicum cDNA, mRNA sequence.    56   0.001  1
BU798139|BU798139.1 SJF2AAF09 SJF Schistosoma japonicum cDNA, mRNA sequence.    56   0.001  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54YC4) RecName: Full=Alpha-mannosidase D;          EC=3.2.1.24...   134   2e-30
AB011474_23(AB011474|pid:none) Arabidopsis thaliana genomic DNA,...   133   4e-30
(Q54YF7) RecName: Full=Alpha-mannosidase B;          EC=3.2.1.24...   130   3e-29
AC148217_12(AC148217|pid:none) Medicago truncatula clone mth2-20...   129   4e-29
AK161799_1(AK161799|pid:none) Mus musculus 13 days embryo male t...   124   2e-27
AF107018_1(AF107018|pid:none) Mus musculus alpha-mannosidase IIx...   124   2e-27
BC142656_1(BC142656|pid:none) Homo sapiens mannosidase, alpha, c...   123   4e-27
L28821_1(L28821|pid:none) Homo sapiens alpha mannosidase II isoz...   122   5e-27
(P49641) RecName: Full=Alpha-mannosidase 2x;          EC=3.2.1.1...   122   5e-27
(P34098) RecName: Full=Lysosomal alpha-mannosidase;          Sho...   120   3e-26

 psg: 0.94  gvh: 0.66  alm: 0.50  top: 0.47  tms: 0.00  mit: 0.29  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: extracellular, including cell wall
	 28.0 %: cytoplasmic
	 16.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  8.0 %: nuclear
	  4.0 %: vacuolar

>> prediction for SHI893 is exc

>SHI893F.Seq
AAAAAAAAAATATATATATCATTAAAATAAAATTCATTTAATAATAATAATTTAATTTTT
TTCATAGTATTCAAAGATATAATGAAAAACTTTTATTATTTTATATTAATTTTATTATTT
TTTAATGAAGTTTGCTATTCATTAAAAGATGGTGAAATTAAACTTCATTTAATTCCACAT
TCACATTGTGATTCTGGATGGACATCAACAATGAACGAATATTATATGGGTCAAGTTAAA
AGTATTATATCATCAATGGTTCAATCATTAAATGTTGAATCAAATCCACCTAAAAAATTT
GTTTGGTCTGAAATTGGATTTTTAAAACAATGGTGGGATGATATGCCAATTGAAATTAAA
AATGATTTTATAAAACATGTTAAAAATGATANAATTGAATTTGTAAATGGNGGATGGGTA
ATGAATGATGAAGCATGTGCAAGTTTAAAAAGTGTAATTANACAATTATCAAATGGACAT
AAATTTATTAGAGAGAAATTTGGAAAACAACCANAGAGNGGATGGCAAATTGATCCATTT
GGACATTCATCATTGACACCAACATTACAAGCTCANNNNNNNNNN