>SHI412 (SHI412Q) /CSM/SH/SHI4-A/SHI412Q.Seq.d/
AAAATAATAAATTTACTATCAAATAACTATTTTTTCTTTTCTTTCTTTTTAAAGTTTAAA
TAATAGAAATAATAAAAATTAATATTAAAAAAAAGGAACGTTAAAAAAAAAAAGATTTCT
TTTTCTTTTTTTGAAATTGGTATAATTAAAAATGTATAGTAAAAAATATACATCCTTTGT
AATAGTATTGATTTTATCATGTATCATTTCAACATGTACATCCAATCAAATTTCTGAANA
TGNGGGTAAAGCAATTAATCAAAAATTAAATGAAAATATTGAAAAAGTTGAANATGTAGT
TGTNCAATTTGANAATGTTGCAAATCAAGTTATTGAANAATTAAAAGTTGAACATCAAAG
ACAANAATTATTAGGNGAAGTAAAACATGATTCATTAANANACTCTGCAACAAATTACAT
TTGGGGATGACTTGATAAAATTCAAAGTTATTTACCAAAAGACAACAATAAAGTTTCAAA
AGTTGAAGGAGCATTTTCAAGNGGCCAAAATAATAATATCGGTAGCAGTATTGGNGATTC
AACTGGGGCTAGTACTTCCCCACAATTCCAAAGTATAAATGGTTTATCCGGAGXXXXXXX
XXX

k**iyyqitifsflsf*slnnrnnkn*y*kkgtlkkkrflflflklv*LKMYSKKYTSFV
IVLILSCIISTCTSNQISEXXGKAINQKLNENIEKVEXVVVQFXNVANQVIEXLKVEHQR
QXLLGEVKHDSLXXSATNYIWG*ldkiqsylpkdnnkvskvegafsxgqnnnigssigds
tgastspqfqsinglsg---

Frame A:
kiinllsnnyfffsfflkfk**k**klilkkrnvkkkkisfsffeigiiknv**kiyilc
nsidfimyhfnmyiqsnf*xxg*sn*skik*ky*ks*xcscxi*xcckssy*xiks*tsk
txiirxskt*fixxlcnklhlgmt**nsklftkrqq*sfks*rsifkxpk**yr*qywxf
nwg*yfptipkykwfir---


Frame B:
k**iyyqitifsflsf*slnnrnnkn*y*kkgtlkkkrflflflklv*LKMYSKKYTSFV
IVLILSCIISTCTSNQISEXXGKAINQKLNENIEKVEXVVVQFXNVANQVIEXLKVEHQR
QXLLGEVKHDSLXXSATNYIWG*ldkiqsylpkdnnkvskvegafsxgqnnnigssigds
tgastspqfqsinglsg---


Frame C:
nnkftik*lfflfflfkv*iieiikinikkker*kkkdfffff*nwyn*kcivknihpl*
*y*fyhvsfqhvhpikflxmxvkqlikn*mkilkklxm*lxnlxmlqikllxn*klnikd
xny*xk*nmih*xtlqqitfgddlikfkviyqkttikfqklkehfqxakiiisvavlxiq
lglvlphnskv*mvyp---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHI412 (SHI412Q) /CSM/SH/SHI4-A/SHI412Q.Seq.d/                        842   0.0
SSD275 (SSD275Q) /CSM/SS/SSD2-D/SSD275Q.Seq.d/                        811   0.0
SHK205 (SHK205Q) /CSM/SH/SHK2-A/SHK205Q.Seq.d/                        811   0.0
SHH539 (SHH539Q) /CSM/SH/SHH5-B/SHH539Q.Seq.d/                        811   0.0
SHH409 (SHH409Q) /CSM/SH/SHH4-A/SHH409Q.Seq.d/                        811   0.0
SHA112 (SHA112Q) /CSM/SH/SHA1-A/SHA112Q.Seq.d/                        811   0.0
CHO150 (CHO150Q) /CSM/CH/CHO1-C/CHO150Q.Seq.d/                        811   0.0
CHJ745 (CHJ745Q) /CSM/CH/CHJ7-B/CHJ745Q.Seq.d/                        811   0.0
CHH572 (CHH572Q) /CSM/CH/CHH5-C/CHH572Q.Seq.d/                        811   0.0
AHN527 (AHN527Q) /CSM/AH/AHN5-B/AHN527Q.Seq.d/                        811   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U25143|U25143.1 Dictyostelium discoideum cAMP-inducible prespore protein gene, complete cds.   642   0.0    4
CG917461|CG917461.1 ZMMBBb0386M12.f ZMMBBb Zea mays subsp. mays genomic clone ZMMBBb0386M12 5', genomic survey sequence.    40   0.002  2
CL253092|CL253092.1 ZMMBBb0601E20r ZMMBBb (HindIII) Zea mays subsp. mays genomic clone ZMMBBb0601E20 3', genomic survey sequence.    38   0.005  2
CL127218|CL127218.1 ISB1-92C10_Sp6.1 ISB1 Silurana tropicalis genomic clone ISB1-92C10, genomic survey sequence.    36   0.005  3
CZ393130|CZ393130.1 ZMMBF0171F02f ZMMBF Zea mays genomic clone ZMMBF0171F02 5', genomic survey sequence.    38   0.006  2
CZ185040|CZ185040.1 OA_BBa0100O09.r OA_BBa Oryza alta genomic clone OA_BBa0100O09 3', genomic survey sequence.    38   0.006  2
CW534531|CW534531.1 OP__Ba0046K14.r OP__Ba Oryza punctata genomic clone OP__Ba0046K14 3', genomic survey sequence.    38   0.007  2
CW118330|CW118330.1 104_494_11108146_148_34623_035 Sorghum methylation filtered library (LibID: 104) Sorghum bicolor genomic clone 11108146, genomic survey sequence.    38   0.007  2
CZ817077|CZ817077.1 OC__Ba0194A04.r OC__Ba Oryza coarctata genomic clone OC__Ba0194A04 3', genomic survey sequence.    38   0.007  2
CZ783259|CZ783259.1 OC__Ba0145H01.f OC__Ba Oryza coarctata genomic clone OC__Ba0145H01 5', genomic survey sequence.    38   0.008  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P54682) RecName: Full=cAMP-inducible prespore protein D7; Flags...   233   2e-60

 psg: 0.98  gvh: 0.70  alm: 0.47  top: 0.27  tms: 0.00  mit: 0.43  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 64.0 %: extracellular, including cell wall
	 12.0 %: mitochondrial
	  8.0 %: vacuolar
	  8.0 %: endoplasmic reticulum
	  4.0 %: cytoplasmic
	  4.0 %: nuclear

>> prediction for SHI412 is exc

>SHI412F.Seq
AAAATAATAAATTTACTATCAAATAACTATTTTTTCTTTTCTTTCTTTTTAAAGTTTAAA
TAATAGAAATAATAAAAATTAATATTAAAAAAAAGGAACGTTAAAAAAAAAAAGATTTCT
TTTTCTTTTTTTGAAATTGGTATAATTAAAAATGTATAGTAAAAAATATACATCCTTTGT
AATAGTATTGATTTTATCATGTATCATTTCAACATGTACATCCAATCAAATTTCTGAANA
TGNGGGTAAAGCAATTAATCAAAAATTAAATGAAAATATTGAAAAAGTTGAANATGTAGT
TGTNCAATTTGANAATGTTGCAAATCAAGTTATTGAANAATTAAAAGTTGAACATCAAAG
ACAANAATTATTAGGNGAAGTAAAACATGATTCATTAANANACTCTGCAACAAATTACAT
TTGGGGATGACTTGATAAAATTCAAAGTTATTTACCAAAAGACAACAATAAAGTTTCAAA
AGTTGAAGGAGCATTTTCAAGNGGCCAAAATAATAATATCGGTAGCAGTATTGGNGATTC
AACTGGGGCTAGTACTTCCCCACAATTCCAAAGTATAAATGGTTTATCCGGAGNNNNNNN
NNN