>AFB173 (AFB173Q) /CSM/AF/AFB1-D/AFB173Q.Seq.d/
AATTTCTCCAATCATCATATTTATAATTATATCTTTTTTGTTTAATAAAAAAGAAAGAAT
ACCAACATGAGACTTTTATTGTGTTTAATTTTCTTAGTTTTTGTTTTCAATTTTGCATTA
TCAACAGXXXXXXXXXX

flqssyl*LYLFCLIKKKEYQHETFIVFNFLSFCFQFCIIN---

Frame A:
nfsnhhiynyiffv**krkntnmrlllcliflvfvfnfalst---


Frame B:
ispiiifiiisflfnkkeript*dfycv*fs*flfsilhyq---


Frame C:
flqssyl*LYLFCLIKKKEYQHETFIVFNFLSFCFQFCIIN---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFN642 (VFN642Q) /CSM/VF/VFN6-B/VFN642Q.Seq.d/                        143   7e-34
VFM435 (VFM435Q) /CSM/VF/VFM4-B/VFM435Q.Seq.d/                        143   7e-34
VFL283 (VFL283Q) /CSM/VF/VFL2-D/VFL283Q.Seq.d/                        143   7e-34
VFL214 (VFL214Q) /CSM/VF/VFL2-A/VFL214Q.Seq.d/                        143   7e-34
VFK631 (VFK631Q) /CSM/VF/VFK6-B/VFK631Q.Seq.d/                        143   7e-34
VFI619 (VFI619Q) /CSM/VF/VFI6-A/VFI619Q.Seq.d/                        143   7e-34
VFH244 (VFH244Q) /CSM/VF/VFH2-B/VFH244Q.Seq.d/                        143   7e-34
VFH220 (VFH220Q) /CSM/VF/VFH2-A/VFH220Q.Seq.d/                        143   7e-34
VFH144 (VFH144Q) /CSM/VF/VFH1-B/VFH144Q.Seq.d/                        143   7e-34
VFH121 (VFH121Q) /CSM/VF/VFH1-A/VFH121Q.Seq.d/                        143   7e-34

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

U36937|U36937.1 Dictyostelium discoideum calreticulin mRNA, complete cds.   101  1e-19  2
BX548010|BX548010.2 Mouse DNA sequence *** SEQUENCING IN PROGRESS *** from clone  RP23-22P24.    44  0.019  4
AF543476|AF543476.1 Uncultured bacterium plasmid pAK112 YjhP (yjhP) gene, partial cds; putative transmembrane protein and probable integral membrane protein genes, complete cds; and unknown gene.    48  0.025  1
AL489451|AL489451.1 T. brucei sheared genomic DNA clone 306e10, reverse sequence.    46  0.099  1
BH252350|BH252350.1 SALK_013145 Arabidopsis thaliana TDNA insertion lines Arabidopsis thaliana genomic clone SALK_013145, DNA sequence.    46  0.099  1
AL483276|AL483276.1 T. brucei sheared genomic DNA clone 257b04, forward sequence.    46  0.099  1
AC091182|AC091182.5 Homo sapiens chromosome 8, clone RP11-527N22, complete sequence.    36  0.18  3
AP006306|AP006306.1 Homo sapiens genomic DNA, chromosome 8 clone:RP11-591J4, complete sequence.    36  0.19  3
BX255904|BX255904.3 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone.    42  0.19  5
AB063522|AB063522.2 Wigglesworthia brevipalpis DNA, complete genome, section 2/2.    40  0.23  5

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3039690
Number of Hits to DB: 148,164,934

 psg: 0.70  gvh: 0.52  alm: 0.28  top: 0.37  tms: 0.07  mit: 0.17  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 1.00  yqr: 1.00  tyr: 0.62  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 24.0 %: endoplasmic reticulum
	 20.0 %: cytoplasmic
	 16.0 %: Golgi
	 16.0 %: mitochondrial
	 16.0 %: nuclear
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for AFB173 is end

>AFB173F.Seq
AATTTCTCCAATCATCATATTTATAATTATATCTTTTTTGTTTAATAAAAAAGAAAGAAT
ACCAACATGAGACTTTTATTGTGTTTAATTTTCTTAGTTTTTGTTTTCAATTTTGCATTA
TCAACAG----------