>SHH190 (SHH190Q) /CSM/SH/SHH1-D/SHH190Q.Seq.d/
ATGGCTCCACCAGAAATTGGTAATGATGAAATCCCATTACAAGAATTTGGACAAAAATCA
TTTGCAGCTGATAATACAATTGGCGGAATGCAAAGTATTTCATATGATAATTCGGGTGCT
CCAATGGGTTTATATAAAGAAAAGAAAGGAATGTATGTCACCGCTAGAAATTTAAGTATG
TCTATTGGTACTGAAAAGAAAGGTGATAAAAGAAATATTTTATCAGATTTAAATTTTTTC
CTTAAACCAGGTTCAATGGTTTTAATTTTGGGTTCTCCAGGTTGTGGTAAAACCTCAGTT
ATGAAAGCATTGGCCAATCAATTACATTCTGAAACTGTATCTGGTAGTTTATTATTTAAT
GGTAAAGCTGCTAATAAAAGTACTCATCATAGAGATGTTGCATATGTTGTACAAGGTGAT
CATCATATGGCTCCATTCACAGTTAGAGAAACATTTAAATTTTCAGCCGATCTTCAAATG
AGTGAAGGTACATCTGAAGAAGAAAAGAACGCAAGAGTTGATTATATTTTAAAGACTTTG
GATCTTACTAGACAACAAGATACAGTTGTTGGTAATGAATTTTTAAGAGGTGTATCGGGT
GGTCAAAAGAAXXXXXXXXXX

MAPPEIGNDEIPLQEFGQKSFAADNTIGGMQSISYDNSGAPMGLYKEKKGMYVTARNLSM
SIGTEKKGDKRNILSDLNFFLKPGSMVLILGSPGCGKTSVMKALANQLHSETVSGSLLFN
GKAANKSTHHRDVAYVVQGDHHMAPFTVRETFKFSADLQMSEGTSEEEKNARVDYILKTL
DLTRQQDTVVGNEFLRGVSGGQK---

Frame A:
MAPPEIGNDEIPLQEFGQKSFAADNTIGGMQSISYDNSGAPMGLYKEKKGMYVTARNLSM
SIGTEKKGDKRNILSDLNFFLKPGSMVLILGSPGCGKTSVMKALANQLHSETVSGSLLFN
GKAANKSTHHRDVAYVVQGDHHMAPFTVRETFKFSADLQMSEGTSEEEKNARVDYILKTL
DLTRQQDTVVGNEFLRGVSGGQK---


Frame B:
wlhqklvmmkshyknldknhlqliiqlaeckvfhmiirvlqwvyikkrkecmsplei*vc
llvlkrkvikeifyqi*ifslnqvqwf*fwvlqvvvkpql*khwpinyilklylvvyylm
vkllikvliiemlhmlykviiiwlhsqlekhlnfqpifk*vkvhlkkkrtqeliif*rlw
illdnkiqllvmnf*evyrvvkr---


Frame C:
gstrnw***npitriwtkiics**ynwrnakyfi**fgcsngfi*rkernvchr*kfkyv
ywy*ker**kkyfirfkffp*trfngfnfgfsrlw*nlsyesigqsitf*nciw*fii*w
*sc**kyss*rccicctr*ssygsihs*rni*ifsrssne*ryi*rrkerks*lyfkdfg
sy*ttryscw**ifkrcigwsk---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHH190 (SHH190Q) /CSM/SH/SHH1-D/SHH190Q.Seq.d/                       1211   0.0
SHH215 (SHH215Q) /CSM/SH/SHH2-A/SHH215Q.Seq.d/                       1148   0.0
AHF377 (AHF377Q) /CSM/AH/AHF3-D/AHF377Q.Seq.d/                       1094   0.0
AHD544 (AHD544Q) /CSM/AH/AHD5-B/AHD544Q.Seq.d/                       1013   0.0
AHI849 (AHI849Q) /CSM/AH/AHI8-C/AHI849Q.Seq.d/                        942   0.0
AHE464 (AHE464Q) /CSM/AH/AHE4-C/AHE464Q.Seq.d/                        872   0.0
SHJ238 (SHJ238Q) /CSM/SH/SHJ2-B/SHJ238Q.Seq.d/                        676   0.0
AHA196 (AHA196Q) /CSM/AH/AHA1-D/AHA196Q.Seq.d/                        543   e-153
AHO435 (AHO435Q) /CSM/AH/AHO4-B/AHO435Q.Seq.d/                        511   e-144
AHR112 (AHR112Q) /CSM/AH/AHR1-A/AHR112Q.Seq.d/                        509   e-143

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC117080|AC117080.2 Dictyostelium discoideum chromosome 2 map complement(821514-735598) strain AX4, complete sequence.   852   0.0    2
AF246689|AF246689.2 Dictyostelium discoideum ABC transporter mdrA1 (MDRA1) and ABC transporter mdrA2 (MDRA2) genes, complete cds.   852   0.0    2
AF482381|AF482381.1 Dictyostelium discoideum ABC transporter AbcG2 (abcG2) and ABC transporter AbcG18 (abcG18) genes, complete cds.   852   0.0    2
AF482385|AF482385.1 Dictyostelium discoideum ABC transporter AbcG6 (abcG6) gene, partial cds.    44   5e-05  3
AF482384|AF482384.1 Dictyostelium discoideum ABC transporter AbcG5 (abcG5) gene, complete cds.    36   0.009  3
DT167339|DT167339.1 JGI_ANNO40275.rev ANNO Pimephales promelas Whole (M) Pimephales promelas cDNA clone ANNO40275 3', mRNA sequence.    48   0.24   1
AC138464|AC138464.19 Medicago truncatula clone mth2-29i23, complete sequence.    48   0.24   1
AC178999|AC178999.1 Strongylocentrotus purpuratus clone R3-3122P12, WORKING DRAFT SEQUENCE, 7 unordered pieces.    38   0.25   5
AC177006|AC177006.1 Strongylocentrotus purpuratus clone R3-37D23, WORKING DRAFT SEQUENCE, 15 unordered pieces.    38   0.92   4
BW629421|BW629421.1 Lotus japonicus cDNA, clone: LjFL2-023-AG06, 5' end, suspension-cultured cells treated with salicylic acid or methyljasmonate.    46   0.95   1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54TV2) RecName: Full=ABC transporter G family member 5; AltNam...   145   7e-34
AF482384_1(AF482384|pid:none) Dictyostelium discoideum ABC trans...   145   1e-33
(Q54TV1) RecName: Full=ABC transporter G family member 6; AltNam...   144   3e-33
AF482394_1(AF482394|pid:none) Dictyostelium discoideum ABC trans...   107   3e-22
AP005724_21(AP005724|pid:none) Oryza sativa Japonica Group genom...   107   3e-22
(Q5W274) RecName: Full=Pleiotropic drug resistance protein 3; Al...   100   4e-20
AC004680_16(AC004680|pid:none) Arabidopsis thaliana chromosome 2...   100   5e-20
(Q7PC88) RecName: Full=Probable pleiotropic drug resistance prot...   100   5e-20
CR380958_334(CR380958|pid:none) Candida glabrata strain CBS138 c...    98   2e-19
(Q9M9E1) RecName: Full=Pleiotropic drug resistance protein 12;  ...    97   4e-19

 psg: 0.75  gvh: 0.35  alm: 0.41  top: 0.53  tms: 0.00  mit: 0.17  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 40.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: vesicles of secretory system

>> prediction for SHH190 is cyt

>SHH190F.Seq
ATGGCTCCACCAGAAATTGGTAATGATGAAATCCCATTACAAGAATTTGGACAAAAATCA
TTTGCAGCTGATAATACAATTGGCGGAATGCAAAGTATTTCATATGATAATTCGGGTGCT
CCAATGGGTTTATATAAAGAAAAGAAAGGAATGTATGTCACCGCTAGAAATTTAAGTATG
TCTATTGGTACTGAAAAGAAAGGTGATAAAAGAAATATTTTATCAGATTTAAATTTTTTC
CTTAAACCAGGTTCAATGGTTTTAATTTTGGGTTCTCCAGGTTGTGGTAAAACCTCAGTT
ATGAAAGCATTGGCCAATCAATTACATTCTGAAACTGTATCTGGTAGTTTATTATTTAAT
GGTAAAGCTGCTAATAAAAGTACTCATCATAGAGATGTTGCATATGTTGTACAAGGTGAT
CATCATATGGCTCCATTCACAGTTAGAGAAACATTTAAATTTTCAGCCGATCTTCAAATG
AGTGAAGGTACATCTGAAGAAGAAAAGAACGCAAGAGTTGATTATATTTTAAAGACTTTG
GATCTTACTAGACAACAAGATACAGTTGTTGGTAATGAATTTTTAAGAGGTGTATCGGGT
GGTCAAAAGAANNNNNNNNNN