>SHG160 (SHG160Q) /CSM/SH/SHG1-C/SHG160Q.Seq.d/
ATTAATAAATAATAATTAAAATTTGCATATATAAAAGAAATAAAAATTTTTTATTTTTTG
TAAACATATTATTTTCTGTAAATAAATCATATAATTTTTCAACATACATATATATATATA
TATTTTTAAAATAAAATAAAATAAAAATGTCATTTAGTCCAGAAGAATTTACTGATAAAA
CAAATACAATTTTGTTAAGAACTCAAGAATTGGCAAGAGAAAAATCAAATGTACAATTAG
CACCAATACATTTGGCTGTTACATTATTAAATGATGAAGATAATTTAGCAAAATCTATAT
TTGAAAAAGCTGGTGGAGATGTACCAAAAATTGATGCTGGTTTTAAAAGATTATTAGCCA
AACAACCCGTTCAAAATCCAGTACCACCTGAAATTTCTCCAAATTCATTATTTTTACAAG
TTTTAAGATCAGCAGCACGTCATCAAAAGAATAATGGTGATTCTCATTTAGCAGTTGACC
ATTTAATATTGGGATTATTGGATGATAGAGATATATTATCAGTATTGGGAGATGCTGGTG
CAACCAAAXXXXXXXXXXTNGNCAAAAGCATTGGCATGGGAATTGTTTGATGATGAATCT
CATATGGTTAGAATTGATATGAGTGAATATATGGANCAACATTCGGTTTCTCGTTTAATT
GGTGCTCCACCAGGTTATGTAGGTTATGATCAAGGTGGTCAATTAACTGAAGCCGTCAGA
AGAAGACCATACAGTGTAGTATTGTTTGATGAAGTTGAAAAAGCTCATCAACAAGTTTGG
AATGTTCTCTTACAAGTATTGGATGAAGGTCGTCTTACCGATGGTCAAGGTAGAACCGTA
GATTTCTCAAATGTTGTTATCATTATGACCTCAAATTTAGGTAGTCAATACATCCTTGGT
GAACAAGCAAACAAAGAAGGTGGTAACAACTCTTTATCACAAGCTTGTAAAGATAAAGTC
ATTGATGAAGTTAGAAAACATTTCCGTCCAGAGTTTTTAAATCGTCTCGATGATATAATT
GTCTTTACTCCATTGAGTAAAGAAAACCTTCATAGTATTATTACTCTTCAATTAAGATCC
GTCGAAAAGAGATTAGAAGATCAAAATATGTCTTTAAAGATTTCAAACGATGCTTTAGAT
TCAATTATCAATGCTGCATATGATCCAATCTTTGGTGGTAGACCATTGAAACGTTACATT
GAAAAGAATATTGTCACTGAACTTAGTAAACTCATCCTTGGTGGTAAATTAAAAGAAAAT
CAAGGTGTTGTTGTCAAGAAAAAGATCATCATCTCAACTTGATATTATAGATTTAAAACA
ACAACAACAACGTCCAGCTTCTCCAACCAAAAAACAAAAAACT

**iiikiciykrnknflffvnilfsvnksynfstyiyiyiflk*NKIKMSFSPEEFTDKT
NTILLRTQELAREKSNVQLAPIHLAVTLLNDEDNLAKSIFEKAGGDVPKIDAGFKRLLAK
QPVQNPVPPEISPNSLFLQVLRSAARHQKNNGDSHLAVDHLILGLLDDRDILSVLGDAGA
TK---

---XXKALAWELFDDESHMVRIDMSEYMXQHSVSRLIGAPPGYVGYDQGGQLTEAVRRRP
YSVVLFDEVEKAHQQVWNVLLQVLDEGRLTDGQGRTVDFSNVVIIMTSNLGSQYILGEQA
NKEGGNNSLSQACKDKVIDEVRKHFRPEFLNRLDDIIVFTPLSKENLHSIITLQLRSVEK
RLEDQNMSLKISNDALDSIINAAYDPIFGGRPLKRYIEKNIVTELSKLILGGKLKENQGV
VVKKKIIIST*yyrfktttttssfsnqktkn

Frame A:
ink**lkfayikeikifyfl*tyyfl*inhiifqhtyiyiyf*nkik*kchlvqknllik
qiqfc*elknwqeknqmyn*hqyiwllhy*mmkii*qnlylkklvemyqklmlvlkdy*p
nnpfkiqyhlkflqihyfykf*dqqhvikrimvili*qlti*ywdywmieiyyqywemlv
qp---

---XXKALAWELFDDESHMVRIDMSEYMXQHSVSRLIGAPPGYVGYDQGGQLTEAVRRRP
YSVVLFDEVEKAHQQVWNVLLQVLDEGRLTDGQGRTVDFSNVVIIMTSNLGSQYILGEQA
NKEGGNNSLSQACKDKVIDEVRKHFRPEFLNRLDDIIVFTPLSKENLHSIITLQLRSVEK
RLEDQNMSLKISNDALDSIINAAYDPIFGGRPLKRYIEKNIVTELSKLILGGKLKENQGV
VVKKKIIIST*yyrfktttttssfsnqktkn

Frame B:
linnn*nlhi*kk*kffifckhiifck*ii*ffnihiyiyifkik*nknvi*srriy**n
kynfvknsrigkrkikctistntfgcyiik**r*fskiyi*kswwrctkn*cwf*kiisq
ttrsksstt*nfskfiiftsfkisstsske*w*fsfss*pfnigiig**ryiisigrcwc
nq---

---xqkhwhgnclmmnliwleli*vniwxnirflv*lvlhqvm*vmikvvn*lkpseedh
tv*yclmklkklinkfgmfsykywmkvvlpmvkvep*isqmllsl*pqi*vvntslvnkq
tkkvvttlyhklvkikslmklenisvqsf*ivsmi*lsllh*vkktfivlllfn*dpskr
d*kikicl*rfqtml*iqlsmlhmiqslvvdh*nvtlkrilslnlvnsslvvn*kkikvl
lsrkrsssqldiidlkqqqqrpasptkkqkt

Frame C:
**iiikiciykrnknflffvnilfsvnksynfstyiyiyiflk*NKIKMSFSPEEFTDKT
NTILLRTQELAREKSNVQLAPIHLAVTLLNDEDNLAKSIFEKAGGDVPKIDAGFKRLLAK
QPVQNPVPPEISPNSLFLQVLRSAARHQKNNGDSHLAVDHLILGLLDDRDILSVLGDAGA
TK---

---xksigmgiv***isyg*n*ye*iygxtfgfsfnwcstrlcrl*srwsin*srqkkti
qcsiv**s*kssstslecsltsig*rssyrwsr*nrrflkccyhydlkfr*sihpw*tsk
qrrw*qlfitsl*r*sh**s*ktfpsrvfkssr*ynclysie*rkps*yyyssikirrke
irrskyvfkdfkrcfrfnyqcci*snlww*tietlh*keych*t**thpww*ikrksrcc
cqekdhhlnlil*i*nnnnnvqllqpknkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHG160 (SHG160Q) /CSM/SH/SHG1-C/SHG160Q.Seq.d/                       2303   0.0
CHM544 (CHM544Q) /CSM/CH/CHM5-B/CHM544Q.Seq.d/                       2252   0.0
SHA261 (SHA261Q) /CSM/SH/SHA2-C/SHA261Q.Seq.d/                       1544   0.0
CHL860 (CHL860Q) /CSM/CH/CHL8-C/CHL860Q.Seq.d/                       1532   0.0
SHG564 (SHG564Q) /CSM/SH/SHG5-C/SHG564Q.Seq.d/                       1530   0.0
CHR708 (CHR708Q) /CSM/CH/CHR7-A/CHR708Q.Seq.d/                       1530   0.0
CHL309 (CHL309Q) /CSM/CH/CHL3-A/CHL309Q.Seq.d/                       1530   0.0
CHI477 (CHI477Q) /CSM/CH/CHI4-D/CHI477Q.Seq.d/                       1524   0.0
SHB463 (SHB463Q) /CSM/SH/SHB4-C/SHB463Q.Seq.d/                       1522   0.0
SHL672 (SHL672Q) /CSM/SH/SHL6-C/SHL672Q.Seq.d/                       1516   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

CP000029|CP000029.1 Staphylococcus epidermidis RP62A, complete genome.   123   2e-32  3
AE016746|AE016746.1 Staphylococcus epidermidis ATCC 12228, section 3 of 9 of the complete genome.   123   3e-32  3
AX145048|AX145048.1 Sequence 3770 from Patent WO0134809.          123   3e-32  3
AR485684|AR485684.1 Sequence 3770 from patent US 6703492.         123   3e-32  3
AF269730|AF269730.1 Staphylococcus epidermidis strain SR1 clone step.1020d12 genomic sequence.   123   3e-32  3
AX143829|AX143829.1 Sequence 2551 from Patent WO0134809.          123   3e-32  3
AR484857|AR484857.1 Sequence 2551 from patent US 6703492.         123   3e-32  3
AB239684|AB239684.1 Tetragenococcus halophilus gene for ClpB, complete cds.   100   1e-22  2
BX842644|BX842644.1 Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete  sequence; segment 3/4.    62   9e-18  3
AP008934|AP008934.1 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome.   103   1e-17  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY764155_1(AY764155|pid:none) Vitis vinifera heat shock protein ...   292   2e-77
AJ970534_1(AJ970534|pid:none) Triticum turgidum subsp. durum par...   291   4e-77
AF097363_1(AF097363|pid:none) Triticum aestivum heat shock prote...   290   8e-77
AJ970533_1(AJ970533|pid:none) Triticum turgidum subsp. durum par...   289   2e-76
AF083327_1(AF083327|pid:none) Zea mays 101 kDa heat shock protei...   288   2e-76
BT066296_1(BT066296|pid:none) Zea mays full-length cDNA clone ZM...   288   2e-76
(Q6F2Y7) RecName: Full=Heat shock protein 101;  &AC130611_3(AC13...   288   2e-76
AJ970535_1(AJ970535|pid:none) Triticum turgidum subsp. durum par...   288   3e-76
L35272_1(L35272|pid:none) Glycine max heat shock protein (SB100)...   288   3e-76
AF174433_1(AF174433|pid:none) Triticum aestivum heat shock prote...   287   5e-76

 psg: 0.63  gvh: 0.36  alm: 0.45  top: 0.53  tms: 0.00  mit: 0.18  mip: 0.00
 nuc: 0.03  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 32.0 %: nuclear
	 16.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for SHG160 is cyt

>SHG160F.Seq
ATTAATAAATAATAATTAAAATTTGCATATATAAAAGAAATAAAAATTTTTTATTTTTTG
TAAACATATTATTTTCTGTAAATAAATCATATAATTTTTCAACATACATATATATATATA
TATTTTTAAAATAAAATAAAATAAAAATGTCATTTAGTCCAGAAGAATTTACTGATAAAA
CAAATACAATTTTGTTAAGAACTCAAGAATTGGCAAGAGAAAAATCAAATGTACAATTAG
CACCAATACATTTGGCTGTTACATTATTAAATGATGAAGATAATTTAGCAAAATCTATAT
TTGAAAAAGCTGGTGGAGATGTACCAAAAATTGATGCTGGTTTTAAAAGATTATTAGCCA
AACAACCCGTTCAAAATCCAGTACCACCTGAAATTTCTCCAAATTCATTATTTTTACAAG
TTTTAAGATCAGCAGCACGTCATCAAAAGAATAATGGTGATTCTCATTTAGCAGTTGACC
ATTTAATATTGGGATTATTGGATGATAGAGATATATTATCAGTATTGGGAGATGCTGGTG
CAACCAAANNNNNNNNNN

>SHG160Z.Seq
NNNNNNNNNNTNGNCAAAAGCATTGGCATGGGAATTGTTTGATGATGAATCTCATATGGT
TAGAATTGATATGAGTGAATATATGGANCAACATTCGGTTTCTCGTTTAATTGGTGCTCC
ACCAGGTTATGTAGGTTATGATCAAGGTGGTCAATTAACTGAAGCCGTCAGAAGAAGACC
ATACAGTGTAGTATTGTTTGATGAAGTTGAAAAAGCTCATCAACAAGTTTGGAATGTTCT
CTTACAAGTATTGGATGAAGGTCGTCTTACCGATGGTCAAGGTAGAACCGTAGATTTCTC
AAATGTTGTTATCATTATGACCTCAAATTTAGGTAGTCAATACATCCTTGGTGAACAAGC
AAACAAAGAAGGTGGTAACAACTCTTTATCACAAGCTTGTAAAGATAAAGTCATTGATGA
AGTTAGAAAACATTTCCGTCCAGAGTTTTTAAATCGTCTCGATGATATAATTGTCTTTAC
TCCATTGAGTAAAGAAAACCTTCATAGTATTATTACTCTTCAATTAAGATCCGTCGAAAA
GAGATTAGAAGATCAAAATATGTCTTTAAAGATTTCAAACGATGCTTTAGATTCAATTAT
CAATGCTGCATATGATCCAATCTTTGGTGGTAGACCATTGAAACGTTACATTGAAAAGAA
TATTGTCACTGAACTTAGTAAACTCATCCTTGGTGGTAAATTAAAAGAAAATCAAGGTGT
TGTTGTCAAGAAAAAGATCATCATCTCAACTTGATATTATAGATTTAAAACAACAACAAC
AACGTCCAGCTTCTCCAACCAAAAAACAAAAAACT

>SHG160P.Seq
ATTAATAAATAATAATTAAAATTTGCATATATAAAAGAAATAAAAATTTTTTATTTTTTG
TAAACATATTATTTTCTGTAAATAAATCATATAATTTTTCAACATACATATATATATATA
TATTTTTAAAATAAAATAAAATAAAAATGTCATTTAGTCCAGAAGAATTTACTGATAAAA
CAAATACAATTTTGTTAAGAACTCAAGAATTGGCAAGAGAAAAATCAAATGTACAATTAG
CACCAATACATTTGGCTGTTACATTATTAAATGATGAAGATAATTTAGCAAAATCTATAT
TTGAAAAAGCTGGTGGAGATGTACCAAAAATTGATGCTGGTTTTAAAAGATTATTAGCCA
AACAACCCGTTCAAAATCCAGTACCACCTGAAATTTCTCCAAATTCATTATTTTTACAAG
TTTTAAGATCAGCAGCACGTCATCAAAAGAATAATGGTGATTCTCATTTAGCAGTTGACC
ATTTAATATTGGGATTATTGGATGATAGAGATATATTATCAGTATTGGGAGATGCTGGTG
CAACCAAA----------TNGNCAAAAGCATTGGCATGGGAATTGTTTGATGATGAATCT
CATATGGTTAGAATTGATATGAGTGAATATATGGANCAACATTCGGTTTCTCGTTTAATT
GGTGCTCCACCAGGTTATGTAGGTTATGATCAAGGTGGTCAATTAACTGAAGCCGTCAGA
AGAAGACCATACAGTGTAGTATTGTTTGATGAAGTTGAAAAAGCTCATCAACAAGTTTGG
AATGTTCTCTTACAAGTATTGGATGAAGGTCGTCTTACCGATGGTCAAGGTAGAACCGTA
GATTTCTCAAATGTTGTTATCATTATGACCTCAAATTTAGGTAGTCAATACATCCTTGGT
GAACAAGCAAACAAAGAAGGTGGTAACAACTCTTTATCACAAGCTTGTAAAGATAAAGTC
ATTGATGAAGTTAGAAAACATTTCCGTCCAGAGTTTTTAAATCGTCTCGATGATATAATT
GTCTTTACTCCATTGAGTAAAGAAAACCTTCATAGTATTATTACTCTTCAATTAAGATCC
GTCGAAAAGAGATTAGAAGATCAAAATATGTCTTTAAAGATTTCAAACGATGCTTTAGAT
TCAATTATCAATGCTGCATATGATCCAATCTTTGGTGGTAGACCATTGAAACGTTACATT
GAAAAGAATATTGTCACTGAACTTAGTAAACTCATCCTTGGTGGTAAATTAAAAGAAAAT
CAAGGTGTTGTTGTCAAGAAAAAGATCATCATCTCAACTTGATATTATAGATTTAAAACA
ACAACAACAACGTCCAGCTTCTCCAACCAAAAAACAAAAAACT