AFB145
Library AF
(Link to library)
Clone ID AFB145
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U16391-1
Original site URL
Representative seq. ID AFB145Z
(Link to Original site)
Representative DNA sequence
>AFB145 (AFB145Q) /CSM/AF/AFB1-B/AFB145Q.Seq.d/
XXXXXXXXXXATACCCATACTCCAAATATCAGCTTTTGAATCATATCCAGTTTGTTTAAT
ANCTTCAGGTGCCATCCAAAATGGGGTACCAACAAATGTATTTCTCTTTGTCATTTGATC
AGTTAATTGACCGGCTAACACCAAAATCAGCTAATTTAACATCACCGCTTGNTGAAAGTA
AAACATTTGCAGCTTTA
sequence update 2001. 6. 1
Translated Amino Acid sequence
---ypyskyqllnhiqfv*XLQVPSKMGYQQMYFSLSFDQLIDRLTPKSANLTSPLXESK
TFAAL


Translated Amino Acid sequence (All Frames)
Frame A:
---ypyskyqllnhiqfv*XLQVPSKMGYQQMYFSLSFDQLIDRLTPKSANLTSPLXESK
TFAAL


Frame B:
---thtpnisf*iisslfnxfrchpkwgtnkcislchlis*ltg*hqnqli*hhrlxkvk
hlql


Frame C:
---pilqisafesypvclixsgaiqngvptnvflfvi*svn*pantkis*fnitax*k*n
icsf


Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

AFB145 (AFB145Q) /CSM/AF/AFB1-B/AFB145Q.Seq.d/ 359 1e-98
VFH696 (VFH696Q) /CSM/VF/VFH6-D/VFH696Q.Seq.d/ 335 1e-91
SFL213 (SFL213Q) /CSM/SF/SFL2-A/SFL213Q.Seq.d/ 335 1e-91
SFJ867 (SFJ867Q) /CSM/SF/SFJ8-C/SFJ867Q.Seq.d/ 335 1e-91
SFH469 (SFH469Q) /CSM/SF/SFH4-C/SFH469Q.Seq.d/ 335 1e-91
SFG377 (SFG377Q) /CSM/SF/SFG3-D/SFG377Q.Seq.d/ 335 1e-91
SFD665 (SFD665Q) /CSM/SF/SFD6-C/SFD665Q.Seq.d/ 335 1e-91
SFD620 (SFD620Q) /CSM/SF/SFD6-A/SFD620Q.Seq.d/ 335 1e-91
CFK466 (CFK466Q) /CSM/CF/CFK4-C/CFK466Q.Seq.d/ 335 1e-91
AFN655 (AFN655Q) /CSM/AF/AFN6-C/AFN655Q.Seq.d/ 335 1e-91

own update 2002.10.28
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

AF059534|AF059534.1 Dictyostelium discoideum severin kinase mRNA, complete cds. 236 3e-87 2
AL547396|AL547396.2 human full-length cDNA 5-PRIME end of clone CS0DI007YP04 of PLACENTA COT 25-NORMALIZED of Homo sapiens (human). 56 1e-10 3
BD126451|BD126451.1 Primer for synthesizing full-length cDNA and use thereof. 54 2e-10 3
BD125185|BD125185.1 Primer for synthesizing full-length cDNA and use thereof. 54 2e-10 3
BD126332|BD126332.1 Primer for synthesizing full-length cDNA and use thereof. 52 7e-10 3
BD124923|BD124923.1 Primer for synthesizing full-length cDNA and use thereof. 52 7e-10 3
BX369471|BX369471.1 human full-length cDNA 5-PRIME end of clone CS0DJ014YC06 of T CELLS (JURKAT CELL LINE) COT 10-NORMALIZED of Homo sapiens (human). 52 1e-09 3
BI257716|BI257716.1 602967376F1 NIH_MGC_12 Homo sapiens cDNA clone IMAGE:5106883 5', mRNA sequence. 52 2e-09 3
BD196965|BD196965.1 Human signal transduction serine/threonine kinase. 52 2e-09 3
A94741|A94741.1 Sequence 2 from Patent WO9932637. 52 2e-09 3
dna update 2003. 7.23
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(O61122) RecName: Full=Serine/threonine-protein kinase svkA; ... 88 1e-22
AK303583_1(AK303583|pid:none) Homo sapiens cDNA FLJ54528 complet... 76 3e-18
BC054651_1(BC054651|pid:none) Danio rerio serine/threonine kinas... 77 3e-18
(Q99JT2) RecName: Full=Serine/threonine-protein kinase MST4; ... 76 3e-18
BC099843_1(BC099843|pid:none) Homo sapiens serine/threonine prot... 76 3e-18
AB168500_1(AB168500|pid:none) Macaca fascicularis testis cDNA cl... 76 3e-18
(Q9P289) RecName: Full=Serine/threonine-protein kinase MST4; ... 76 3e-18
FJ438467_1(FJ438467|pid:none) Sus scrofa serine/threonine protei... 76 3e-18
BC167945_1(BC167945|pid:none) Xenopus tropicalis cDNA clone MGC:... 76 3e-18
AK075150_1(AK075150|pid:none) Homo sapiens cDNA FLJ90669 fis, cl... 76 3e-18
protein update 2009. 3.26
PSORT

psg: 0.86 gvh: 0.39 alm: 0.58 top: 0.40 tms: 0.00 mit: 0.30 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: cytoplasmic
28.0 %: nuclear
12.0 %: mitochondrial
8.0 %: endoplasmic reticulum
4.0 %: cytoskeletal
4.0 %: peroxisomal

>> prediction for AFB145 is cyt

5' end seq. ID -
5' end seq. -
Length of 5' end seq. -
3' end seq. ID AFB145Z
3' end seq.
>AFB145Z.Seq
----------ATACCCATACTCCAAATATCAGCTTTTGAATCATATCCAGTTTGTTTAAT
ANCTTCAGGTGCCATCCAAAATGGGGTACCAACAAATGTATTTCTCTTTGTCATTTGATC
AGTTAATTGACCGGCTAACACCAAAATCAGCTAATTTAACATCACCGCTTGNTGAAAGTA
AAACATTTGCAGCTTTA
Length of 3' end seq. 187
Connected seq. ID -
Connected seq. -
Length of connected seq. -
Full length Seq ID -
Full length Seq. -
Length of full length seq. -