>SHE823 (SHE823Q) /CSM/SH/SHE8-A/SHE823Q.Seq.d/
XXXXXXXXXXAATGTCGATAAAATGTTCACTGCAACCGGTGAATCTCGTTTCCCAATCAT
CGTTGAAGGTGCTAATTTATTCTTTACTCAAAAGGCAAGATTAATGATCGAAGAGAAGGG
TGCTATCATCTTTAAGGATGCCTCTGCCAATAAAGGTGGTGTCACTTCTTCCTCTTTGGA
GGTCTTGGCCGCTTTGGCTTTGAATGATGAAGAATTCGATAGACATATGTGTGTCAAGGA
TAATGTAGTACCAGAGTTTTATGAAAATTACATTAAAGACGTTCATCATACCATTGAATC
AAATGCTCGTTTAGAGTTTGAATGTATTTGGAGTGAACATGAATCAACTAAAACTCCACG
TTCAATCCTTTCCGATCTCTTATCAAATAAAATCAATTCACTCAATGATTCAATTCAAAC
CTCTTCCCTTTGGACNTGATCAATCACTCAGACGTAAAATCATCTCTGCTGCTTGTCCAA
AGGTTTTATTAAATCTTTTAGGTGTTGATAAAATTATGGAACGTGTACCAGAACCATACG
TTAAAGCTATCTTTGGTTCTTATTAACTGNTCCTCAGTG

---VDKMFTATGESRFPIIVEGANLFFTQKARLMIEEKGAIIFKDASANKGGVTSSSLEV
LAALALNDEEFDRHMCVKDNVVPEFYENYIKDVHHTIESNARLEFECIWSEHESTKTPRS
ILSDLLSNKINSLNDSIQTSSLWT*sitqt*nhlcclskgfiksfrc**nygtctrtir*
sylwflltxpq

Frame A:
---msikcslqpvnlvsqsslkvliysllkrqd**skrrvlsslrmplpikvvsllplwr
swplwl*mmknsidicvsrim*yqsfmkitlktfiiplnqmlv*slnvfgvnmnqlklhv
qsfpisyqiksihsmiqfkplpfgxdqslrrkiisaacpkvllnllgvdkimervpepyv
kaifgsy*lxls


Frame B:
---cr*nvhcnr*isfpnhr*rc*filyskgkindrregcyhl*gclcq*rwchfflfgg
lgrfgfe**rir*tyvcqg*cstrvl*klh*rrssyh*ikcsfrv*myle*t*in*nstf
npfrslik*nqftq*fnsnlfpldxinhsdvksslllvqrfy*if*vliklwnvyqnhtl
klslvlinxssv


Frame C:
---VDKMFTATGESRFPIIVEGANLFFTQKARLMIEEKGAIIFKDASANKGGVTSSSLEV
LAALALNDEEFDRHMCVKDNVVPEFYENYIKDVHHTIESNARLEFECIWSEHESTKTPRS
ILSDLLSNKINSLNDSIQTSSLWT*sitqt*nhlcclskgfiksfrc**nygtctrtir*
sylwflltxpq

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHE823 (SHE823Q) /CSM/SH/SHE8-A/SHE823Q.Seq.d/                       1116   0.0
SHL347 (SHL347Q) /CSM/SH/SHL3-B/SHL347Q.Seq.d/                       1082   0.0
SHD412 (SHD412Q) /CSM/SH/SHD4-A/SHD412Q.Seq.d/                       1082   0.0
SHA610 (SHA610Q) /CSM/SH/SHA6-A/SHA610Q.Seq.d/                       1082   0.0
CHR402 (CHR402Q) /CSM/CH/CHR4-A/CHR402Q.Seq.d/                       1082   0.0
CHR279 (CHR279Q) /CSM/CH/CHR2-D/CHR279Q.Seq.d/                       1082   0.0
CHM482 (CHM482Q) /CSM/CH/CHM4-D/CHM482Q.Seq.d/                       1082   0.0
CHI239 (CHI239Q) /CSM/CH/CHI2-B/CHI239Q.Seq.d/                       1082   0.0
AHQ410 (AHQ410Q) /CSM/AH/AHQ4-A/AHQ410Q.Seq.d/                       1082   0.0
AHJ509 (AHJ509Q) /CSM/AH/AHJ5-A/AHJ509Q.Seq.d/                       1082   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

CZ282233|CZ282233.1 cp21f10.f Candida parapsilosis Random Genomic Library Candidaparapsilosis genomic clone cp21f10, genomic survey sequence.    46   2e-08  2
CR382124|CR382124.1 Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL  Y-1140 of Kluyveromyces lactis.    48   2e-04  2
AQ946351|AQ946351.1 Sheared DNA-44O5.TF Sheared DNA Trypanosoma brucei genomic clone Sheared DNA-44O5, DNA sequence.    58   2e-04  1
CD460157|CD460157.3 Fg09_07n13_A Fg09_AAFC_ECORC_Fusarium_graminearum_simple_substrate Gibberella zeae cDNA clone Fg09_07n13, mRNA sequence.    50   0.055  1
AC092736|AC092736.6 Trypanosoma brucei chromosome IX clone RPCI93-28G16, *** SEQUENCING IN PROGRESS ***, 1 ordered pieces.    50   0.055  1
AL404890|AL404890.1 T3 end of clone AU0AA001B12 of library AU0AA from strain CBS 3082 of Saccharomyces kluyveri.    50   0.055  1
CR382135|CR382135.1 Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii.    50   0.055  1
AF095907|AF095907.1 Trypanosoma brucei glutamate dehydrogenase (GDH) gene, mitochondrial gene encoding mitochondrial protein, complete cds.    50   0.055  1
AC111968|AC111968.4 Rattus norvegicus clone CH230-187E9, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.    44   0.37   3
AC123284|AC123284.3 Rattus norvegicus clone CH230-354E24, *** SEQUENCING IN PROGRESS ***, 1 ordered piece.    38   0.63   3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AP007154_641(AP007154|pid:none) Aspergillus oryzae RIB40 genomic...   149   2e-44
AY223544_1(AY223544|pid:none) Emericella nidulans NAD dependent ...   150   8e-44
AM270040_65(AM270040|pid:none) Aspergillus niger contig An02c046...   147   1e-42
CU633900_481(CU633900|pid:none) Podospora anserina genomic DNA c...   155   9e-37
DENCED(A92284;A92215;A32204;A00378)glutamate dehydrogenase (EC 1...   150   2e-35
AE017344_16(AE017344|pid:none) Cryptococcus neoformans var. neof...   129   3e-33
FM992689_715(FM992689|pid:none) Candida dubliniensis CD36 chromo...   126   3e-33
AJ310444_1(AJ310444|pid:none) Gibberella fujikuroi gdh1 gene for...   141   1e-32
CR940353_806(CR940353|pid:none) Theileria annulata strain Ankara...   137   2e-31
AE016820_330(AE016820|pid:none) Ashbya gossypii (= Eremothecium ...   114   2e-28

 psg: 0.75  gvh: 0.35  alm: 0.44  top: 0.53  tms: 0.00  mit: 0.23  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: cytoplasmic
	 28.0 %: nuclear
	  8.0 %: plasma membrane
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system

>> prediction for SHE823 is cyt

>SHE823Z.Seq
NNNNNNNNNNAATGTCGATAAAATGTTCACTGCAACCGGTGAATCTCGTTTCCCAATCAT
CGTTGAAGGTGCTAATTTATTCTTTACTCAAAAGGCAAGATTAATGATCGAAGAGAAGGG
TGCTATCATCTTTAAGGATGCCTCTGCCAATAAAGGTGGTGTCACTTCTTCCTCTTTGGA
GGTCTTGGCCGCTTTGGCTTTGAATGATGAAGAATTCGATAGACATATGTGTGTCAAGGA
TAATGTAGTACCAGAGTTTTATGAAAATTACATTAAAGACGTTCATCATACCATTGAATC
AAATGCTCGTTTAGAGTTTGAATGTATTTGGAGTGAACATGAATCAACTAAAACTCCACG
TTCAATCCTTTCCGATCTCTTATCAAATAAAATCAATTCACTCAATGATTCAATTCAAAC
CTCTTCCCTTTGGACNTGATCAATCACTCAGACGTAAAATCATCTCTGCTGCTTGTCCAA
AGGTTTTATTAAATCTTTTAGGTGTTGATAAAATTATGGAACGTGTACCAGAACCATACG
TTAAAGCTATCTTTGGTTCTTATTAACTGNTCCTCAGTG