>SHE540 (SHE540Q) /CSM/SH/SHE5-B/SHE540Q.Seq.d/
XXXXXXXXXXTAAAAATGATGCCATGAACATTTGGTCTTTCGGTCCAGAAGGTAACGGTG
CCAATCTCCTCGTCAATGTCACCAAAGGTGTTCAATATTTGAATGAAATTAAAGATTCTT
TCGTTGGCGCTTTCCAATGGGCCACCAAAGAAGGTGTTGTTTGTGATGAAAACATGAGAG
GTATCCGTTTCAATCTTTATGATGTCACCCTCCACACTGATGCCATCCACAGAGGTGGTG
GTCAAATCATCCCAACTGCTCGTCGTGTACTCTATGCTGCTGAATTAACTGCCTCCCCAA
CTNTNTTAGAACCAATNTACTTAGTAGAAATTACTGCCCCAGAAAACGCTATTGGTGGTA
TTTACTCTGTACTCAATCGTCGTAGAGGTATTGTTATTGGTGAAGAACGTCGTATCGGTT
CCCCATTATTCTCTGTCAAAGCTCATTTACCAGTATTAGAATCCTTCGGTTTCACCGCTG
ATTTACGTTCCCACACTGCCGGTCAAGCTTTCCCACAATGTGTNTTCGATCATTGGGCTT
CAATTGGTGTTGTCAACAAAGATAAGAAAGCCT

---KNDAMNIWSFGPEGNGANLLVNVTKGVQYLNEIKDSFVGAFQWATKEGVVCDENMRG
IRFNLYDVTLHTDAIHRGGGQIIPTARRVLYAAELTASPTXLEPXYLVEITAPENAIGGI
YSVLNRRRGIVIGEERRIGSPLFSVKAHLPVLESFGFTADLRSHTAGQAFPQCVFDHWAS
IGVVNKDKKA

Frame A:
---KNDAMNIWSFGPEGNGANLLVNVTKGVQYLNEIKDSFVGAFQWATKEGVVCDENMRG
IRFNLYDVTLHTDAIHRGGGQIIPTARRVLYAAELTASPTXLEPXYLVEITAPENAIGGI
YSVLNRRRGIVIGEERRIGSPLFSVKAHLPVLESFGFTADLRSHTAGQAFPQCVFDHWAS
IGVVNKDKKA


Frame B:
---kmmp*tfglsvqkvtvpisssmspkvfni*mklkilslalsngppkkvlfvmkt*ev
svsifmmspstlmpstevvvkssqllvvysmlln*lppqlx*nqxt**kllpqktllvvf
tlysivvevlllvknvvsvphyslskliyqy*npsvspliyvptlpvklshnvxsiiglq
lvlstkirkp


Frame C:
---k*chehlvfrsrr*rcqsprqchqrcsife*n*rffrwrfpmghqrrccl**khery
pfqsl*chpph*chpqrwwsnhpncssctlcc*inclpnxxrtnxlsrnycprkrywwyl
lctqss*rycyw*rtsyrfpiilcqssftsirilrfhr*ftfphcrssfptmcxrslgfn
wccqqr*es

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHE540 (SHE540Q) /CSM/SH/SHE5-B/SHE540Q.Seq.d/                       1092   0.0
CHI379 (CHI379Q) /CSM/CH/CHI3-D/CHI379Q.Seq.d/                       1084   0.0
VHQ491 (VHQ491Q) /CSM/VH/VHQ4-D/VHQ491Q.Seq.d/                       1082   0.0
VHQ483 (VHQ483Q) /CSM/VH/VHQ4-D/VHQ483Q.Seq.d/                       1082   0.0
VHQ476 (VHQ476Q) /CSM/VH/VHQ4-D/VHQ476Q.Seq.d/                       1082   0.0
VHQ473 (VHQ473Q) /CSM/VH/VHQ4-D/VHQ473Q.Seq.d/                       1082   0.0
VHQ453 (VHQ453Q) /CSM/VH/VHQ4-C/VHQ453Q.Seq.d/                       1082   0.0
VHQ446 (VHQ446Q) /CSM/VH/VHQ4-B/VHQ446Q.Seq.d/                       1082   0.0
VHQ434 (VHQ434Q) /CSM/VH/VHQ4-B/VHQ434Q.Seq.d/                       1082   0.0
VHQ410 (VHQ410Q) /CSM/VH/VHQ4-A/VHQ410Q.Seq.d/                       1082   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

M26017|M26017.1 D.discoideum elongation factor 2 mRNA, complete cds.  1043   0.0    1
AR550596|AR550596.1 Sequence 5727 from patent US 6747137.          72   6e-45  6
AF107286|AF107286.1 Candida albicans elongation factor 2 (EFT2) gene, partial cds.    72   1e-42  6
Y09664|Y09664.1 C.albicans EFT2 gene.                              72   1e-42  6
AY497659|AY497659.1 Candida dubliniensis strain CBS 7987 translation elongation factor gene, partial cds.    72   2e-42  5
AF107289|AF107289.1 Candida tropicalis elongation factor 2 (EFT2) gene, partial cds.    64   5e-41  6
CZ289188|CZ289188.1 cp62f05.f Candida parapsilosis Random Genomic Library Candida parapsilosis genomic clone cp62f05, genomic survey sequence.    72   4e-40  6
CZ282959|CZ282959.1 cp27c04.f Candida parapsilosis Random Genomic Library Candida parapsilosis genomic clone cp27c04, genomic survey sequence.    72   9e-40  6
AY497632|AY497632.1 Candida parapsilosis strain ATCC 96140 translation elongation factor gene, partial cds.    84   9e-38  5
AF107291|AF107291.1 Candida parapsilosis elongation factor 2 (EFT2) gene, partial cds.    72   1e-37  6

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069933_1(AY069933|pid:none) Rana sylvatica eukaryotic translat...   254   8e-67
AY391422_1(AY391422|pid:none) Danio rerio eukaryotic translation...   254   1e-66
DQ848932_1(DQ848932|pid:none) Scophthalmus maximus clone kbc101 ...   253   2e-66
BT071866_1(BT071866|pid:none) Salmo salar clone ssal-rgf-501-088...   253   2e-66
BT059038_1(BT059038|pid:none) Salmo salar clone ssal-rgf-521-328...   253   2e-66
BC089730_1(BC089730|pid:none) Xenopus tropicalis MGC108369 prote...   252   4e-66
A40411(A40411) translation elongation factor eEF-2 - Caenorhabdi...   252   4e-66
BT045031_1(BT045031|pid:none) Salmo salar clone ssal-rgf-510-120...   251   7e-66
BC063919_1(BC063919|pid:none) Xenopus tropicalis eukaryotic tran...   251   7e-66
BT072304_1(BT072304|pid:none) Salmo salar clone ssal-rgf-520-280...   251   7e-66

 psg: 0.86  gvh: 0.38  alm: 0.46  top: 0.47  tms: 0.00  mit: 0.19  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.60  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: nuclear
	 40.0 %: cytoplasmic
	  8.0 %: vacuolar
	  4.0 %: peroxisomal

>> prediction for SHE540 is nuc

>SHE540Z.Seq
NNNNNNNNNNTAAAAATGATGCCATGAACATTTGGTCTTTCGGTCCAGAAGGTAACGGTG
CCAATCTCCTCGTCAATGTCACCAAAGGTGTTCAATATTTGAATGAAATTAAAGATTCTT
TCGTTGGCGCTTTCCAATGGGCCACCAAAGAAGGTGTTGTTTGTGATGAAAACATGAGAG
GTATCCGTTTCAATCTTTATGATGTCACCCTCCACACTGATGCCATCCACAGAGGTGGTG
GTCAAATCATCCCAACTGCTCGTCGTGTACTCTATGCTGCTGAATTAACTGCCTCCCCAA
CTNTNTTAGAACCAATNTACTTAGTAGAAATTACTGCCCCAGAAAACGCTATTGGTGGTA
TTTACTCTGTACTCAATCGTCGTAGAGGTATTGTTATTGGTGAAGAACGTCGTATCGGTT
CCCCATTATTCTCTGTCAAAGCTCATTTACCAGTATTAGAATCCTTCGGTTTCACCGCTG
ATTTACGTTCCCACACTGCCGGTCAAGCTTTCCCACAATGTGTNTTCGATCATTGGGCTT
CAATTGGTGTTGTCAACAAAGATAAGAAAGCCT