>SHE417 (SHE417Q) /CSM/SH/SHE4-A/SHE417Q.Seq.d/
ATTTGGTAGTGTGTTAAAAATATAAACTAAAACTAAAAAAAAAATGAAACTTTTGTCTTC
ATTAATTATTTTTTTTGTTATTGTATTATTTTGNGTTGTTGGATCATTATCAGCATCATT
ATGTAAATATCCAGGTTATTCAACTCAAGGNGTTACAAAAACAAATAATGGTTATGAGGC
AACACTTAACCTTATTTCAGCAGGTCCATATGGTAACGATATAGAACAATTAAATTTTCA
ATTAACTTTTGAAACTAGTCAAATTTTTANAGTTAGAATTACTGACCCAAATAATCAAAG
ATGGGAAGTCCCACCAACTGTTAATCAATTAGTTGGANAAAATCCANATTCAACTGATTA
TATAATTGAATTTACAAATAATCCATTTGGTTTTGCAGCAACTCGTATTTCAACTGGTGA
AGTTTTATTTAATACAACTCAACCAAGTGATTGTTCATTTAATGGTTTAATTTATTCAAA
TTATTATTTAGAAXXXXXXXXXX

fgsvlki*TKTKKKMKLLSSLIIFFVIVLFXVVGSLSASLCKYPGYSTQGVTKTNNGYEA
TLNLISAGPYGNDIEQLNFQLTFETSQIFXVRITDPNNQRWEVPPTVNQLVGXNPXSTDY
IIEFTNNPFGFAATRISTGEVLFNTTQPSDCSFNGLIYSNYYL---

Frame A:
iw*cvknin*n*kknetfvfinyffcyciilxcwiiisiim*isrlfnsrxyknk*wl*g
nt*pyfsrsiw*ryrtikfsinf*n*snfxs*ny*pk*skmgsptnc*siswxksxfn*l
yn*iyk*siwfcsnsyfnw*sfi*ynstk*lfi*wfnlfkllfr---


Frame B:
fgsvlki*TKTKKKMKLLSSLIIFFVIVLFXVVGSLSASLCKYPGYSTQGVTKTNNGYEA
TLNLISAGPYGNDIEQLNFQLTFETSQIFXVRITDPNNQRWEVPPTVNQLVGXNPXSTDY
IIEFTNNPFGFAATRISTGEVLFNTTQPSDCSFNGLIYSNYYL---


Frame C:
lvvc*kyklklkkk*nfclh*lfflllyyfxlldhyqhhyvniqviqlkxlqkqimvmrq
hltlfqqvhmvti*nn*ifn*llklvkflxlelltqiikdgkshqllin*lxkixiqlii
*lnlqiihlvlqqlvfqlvkfyliqlnqvivhlmv*fiqiii*---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHJ526 (VHJ526Q) /CSM/VH/VHJ5-B/VHJ526Q.Seq.d/                        841   0.0
SHE417 (SHE417Q) /CSM/SH/SHE4-A/SHE417Q.Seq.d/                        841   0.0
SHK278 (SHK278Q) /CSM/SH/SHK2-D/SHK278Q.Seq.d/                        823   0.0
AHD447 (AHD447Q) /CSM/AH/AHD4-B/AHD447Q.Seq.d/                        823   0.0
SHG509 (SHG509Q) /CSM/SH/SHG5-A/SHG509Q.Seq.d/                        821   0.0
SHK458 (SHK458Q) /CSM/SH/SHK4-C/SHK458Q.Seq.d/                        817   0.0
AHD417 (AHD417Q) /CSM/AH/AHD4-A/AHD417Q.Seq.d/                        815   0.0
AHD126 (AHD126Q) /CSM/AH/AHD1-B/AHD126Q.Seq.d/                        815   0.0
SHJ811 (SHJ811Q) /CSM/SH/SHJ8-A/SHJ811Q.Seq.d/                        813   0.0
AHQ547 (AHQ547Q) /CSM/AH/AHQ5-B/AHQ547Q.Seq.d/                        813   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AE014839|AE014839.1 Plasmodium falciparum 3D7 chromosome 11 section 4 of 8 of the complete sequence.    36   0.26   8
AA550593|AA550593.1 1758m3 gmbPfHB3.1, G. Roman Reddy Plasmodium falciparum genomic clone 1758m, DNA sequence.    40   0.28   2
AL449924|AL449924.1 Streptococcus pneumoniae serotype 19F  *** SEQUENCING IN PROGRESS  *** from clone G54.    36   0.43   3
BE323805|BE323805.2 NF010E10PL1F1071 Phosphate starved leaf Medicago truncatula cDNA clone NF010E10PL 5', mRNA sequence.    46   0.73   1
BH944911|BH944911.1 obu81h08.b1 B.oleracea002 Brassica oleracea genomic, DNA sequence.    46   0.73   1
AL606494|AL606494.4 Mouse DNA sequence from clone RP23-198B6 on chromosome 2.    40   0.75   4
AC117080|AC117080.2 Dictyostelium discoideum chromosome 2 map complement(821514-735598) strain AX4, complete sequence.    38   0.85   6
AC141770|AC141770.1 Apis mellifera clone CH224-63A9, WORKING DRAFT SEQUENCE, 31 unordered pieces.    36   1.1    5
AE014822|AE014822.1 Plasmodium falciparum 3D7 chromosome 14 section 7 of 13 of the complete sequence.    32   1.4    2
BX572075|BX572075.8 Zebrafish DNA sequence from clone CH211-158N13 in linkage group 12.    40   1.6    4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC115034_1(BC115034|pid:none) Homo sapiens sucrase-isomaltase (a...    78   1e-13
BC116452_1(BC116452|pid:none) Homo sapiens sucrase-isomaltase (a...    78   1e-13
(P14410) RecName: Full=Sucrase-isomaltase, intestinal; Contains:...    78   1e-13
M22616_1(M22616|pid:none) Human sucrase-isomaltase mRNA, partial...    78   1e-13
A36690(A36690) sucrose alpha-glucosidase (EC 3.2.1.48) - rat (fr...    75   6e-13
L25926_1(L25926|pid:none) Rat sucrase-isomaltase (SI) mRNA, comp...    72   7e-12
BX294013_13(BX294013|pid:none) Neurospora crassa DNA linkage gro...    72   7e-12
(P23739) RecName: Full=Sucrase-isomaltase, intestinal; Contains:...    72   7e-12
EU937530_1(EU937530|pid:none) Mus musculus sucrase-isomaltase mR...    70   2e-11
AM467592_1(AM467592|pid:none) Vitis vinifera contig VV78X160209....    70   3e-11

 psg: 1.02  gvh: 0.72  alm: 0.52  top: 0.27  tms: 0.00  mit: 0.33  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: extracellular, including cell wall
	 12.0 %: cytoplasmic
	 12.0 %: endoplasmic reticulum
	  8.0 %: vacuolar
	  4.0 %: mitochondrial
	  4.0 %: nuclear

>> prediction for SHE417 is exc

>SHE417F.Seq
ATTTGGTAGTGTGTTAAAAATATAAACTAAAACTAAAAAAAAAATGAAACTTTTGTCTTC
ATTAATTATTTTTTTTGTTATTGTATTATTTTGNGTTGTTGGATCATTATCAGCATCATT
ATGTAAATATCCAGGTTATTCAACTCAAGGNGTTACAAAAACAAATAATGGTTATGAGGC
AACACTTAACCTTATTTCAGCAGGTCCATATGGTAACGATATAGAACAATTAAATTTTCA
ATTAACTTTTGAAACTAGTCAAATTTTTANAGTTAGAATTACTGACCCAAATAATCAAAG
ATGGGAAGTCCCACCAACTGTTAATCAATTAGTTGGANAAAATCCANATTCAACTGATTA
TATAATTGAATTTACAAATAATCCATTTGGTTTTGCAGCAACTCGTATTTCAACTGGTGA
AGTTTTATTTAATACAACTCAACCAAGTGATTGTTCATTTAATGGTTTAATTTATTCAAA
TTATTATTTAGAANNNNNNNNNN