>SHE320 (SHE320Q) /CSM/SH/SHE3-A/SHE320Q.Seq.d/
XXXXXXXXXXGTTTCTTTGTACTTCAAATGCCAGTAGCTTTATCAGGTATTTTAATTCTT
TGTATAGATTTGGGTACTGATCTTATTCCCTGTAATATCTTATGCATACGAAGGTAGTGA
AACTGATCTCATGAAAAGAAAACCAAGAAATGTTAAAAAAGATAAATTGGTTAGTCTTAG
ATTGGCTATTTTCTCTTATCTCTGGTTAGGTTGTTGGCAATGTGCTGCTGGTTTCTTAAA
TTATTTCCTCCTTTTCAAGGATTATGGATATAGTGCTTCCGACCTTTACAATGTTTCCTC
TACCTATTTCAAGAAAGATGCTCCACTTTATGGAGGTCATGATGATGCTAAACAAATTCA
AATTTTAAATGAAGCTCAAACTGCATATTTCATCGCGATTGTAATAAGTAGAGTTGGGGC
TTGTTTCTGCGCTAAAACTAGAATCATTTCAATTTTCCAACAAGGTTTCGGTAATATGGT
ATTCAATTTCGGTGTTTGTTCTATGCTTGCCATTGCTCTATTCATTGTTCATGTACCAGG
TGTTAGAACTTTCTTTGGTTGTACTATTGTCAGTTATAAATATT

---slyfkcq*lyqvf*ffv*IWVLILFPVISYAYEGSETDLMKRKPRNVKKDKLVSLRL
AIFSYLWLGCWQCAAGFLNYFLLFKDYGYSASDLYNVSSTYFKKDAPLYGGHDDAKQIQI
LNEAQTAYFIAIVISRVGACFCAKTRIISIFQQGFGNMVFNFGVCSMLAIALFIVHVPGV
RTFFGCTIVSYKY

Frame A:
---flctsnassfiryfnslyrfgy*sysl*ylmhtkvvklis*kenqemlkkinwlvld
wlfslisg*vvgnvllvs*iissfsrimdivlptftmfplpisrkmlhfmevmmmlnkfk
f*mklklhissrl**velglvsalklesfqfsnkvsviwysisvfvlclpllyslfmyqv
lelslvvllsvini


Frame B:
---ffvlqmpvalsgililcidlgtdlipcnilcirr**n*shekktkkc*kr*ig*s*i
gyfllslvrllamccwflklfppfqglwi*cfrplqcflylfqercstlwrs**c*tnsn
fk*ssncifhrdcnk*swglflr*n*nhfnfptrfr*ygiqfrclfyachcsihcsctrc
*nflwlyycql*i


Frame C:
---slyfkcq*lyqvf*ffv*IWVLILFPVISYAYEGSETDLMKRKPRNVKKDKLVSLRL
AIFSYLWLGCWQCAAGFLNYFLLFKDYGYSASDLYNVSSTYFKKDAPLYGGHDDAKQIQI
LNEAQTAYFIAIVISRVGACFCAKTRIISIFQQGFGNMVFNFGVCSMLAIALFIVHVPGV
RTFFGCTIVSYKY

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHE320 (SHE320Q) /CSM/SH/SHE3-A/SHE320Q.Seq.d/                       1138   0.0
SLB248 (SLB248Q) /CSM/SL/SLB2-B/SLB248Q.Seq.d/                       1122   0.0
SHD890 (SHD890Q) /CSM/SH/SHD8-D/SHD890Q.Seq.d/                       1122   0.0
SHA628 (SHA628Q) /CSM/SH/SHA6-B/SHA628Q.Seq.d/                       1122   0.0
AHE453 (AHE453Q) /CSM/AH/AHE4-C/AHE453Q.Seq.d/                       1122   0.0
AHB320 (AHB320Q) /CSM/AH/AHB3-A/AHB320Q.Seq.d/                       1122   0.0
SHK792 (SHK792Q) /CSM/SH/SHK7-D/SHK792Q.Seq.d/                       1120   0.0
AHJ887 (AHJ887Q) /CSM/AH/AHJ8-D/AHJ887Q.Seq.d/                       1116   0.0
VFC718 (VFC718Q) /CSM/VF/VFC7-A/VFC718Q.Seq.d/                       1114   0.0
AHB757 (AHB757Q) /CSM/AH/AHB7-C/AHB757Q.Seq.d/                       1112   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC098414|AC098414.6 Rattus norvegicus clone CH230-2E16, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.    50   0.055  1
AC124527|AC124527.5 Mus musculus BAC clone RP23-411B11 from 1, complete sequence.    48   0.22   1
AC096717|AC096717.3 Homo sapiens BAC clone RP11-10O3 from 4, complete sequence.    40   0.49   6
AC013616|AC013616.3 Homo sapiens clone RP11-10N3, WORKING DRAFT SEQUENCE, 12 unordered pieces.    40   2.0    5
AC148655|AC148655.4 Medicago truncatula clone mth2-61c11, complete sequence.    42   2.3    2
AC064873|AC064873.2 Homo sapiens chromosome 12 clone RP11-619O7, WORKING DRAFT SEQUENCE, 13 unordered pieces.    36   3.0    5
AC084229|AC084229.2 Homo sapiens clone RP11-25H8, WORKING DRAFT SEQUENCE, 3 unordered pieces.    42   3.3    2
BQ476515|BQ476515.1 curculio2b08.g Curculio glandium cDNA Curculio glandium cDNA clone curculio2b08 3', mRNA sequence.    44   3.4    1
BU520833|BU520833.1 AGENCOURT_10156801 NIH_MGC_71 Homo sapiens cDNA clone IMAGE:6526625 5', mRNA sequence.    44   3.4    1
AC026335|AC026335.21 Homo sapiens chromosome 12 clone RP11-738J5, WORKING DRAFT SEQUENCE, 11 unordered pieces.    44   3.4    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY319391_1(AY319391|pid:none) Oncorhynchus mykiss Na/K ATPase al...    97   3e-23
(Q13733) RecName: Full=Sodium/potassium-transporting ATPase subu...    93   6e-23
AY008376_1(AY008376|pid:none) Danio rerio Na+/K+ ATPase alpha su...    95   6e-23
CU185242_1(CU185242|pid:none) Zebrafish DNA sequence from clone ...    95   6e-23
AY028629_1(AY028629|pid:none) Danio rerio Na+/K+ ATPase alpha1A1...    95   6e-23
AL121987_8(AL121987|pid:none) Human DNA sequence from clone RP11...    93   6e-23
AK098076_1(AK098076|pid:none) Homo sapiens cDNA FLJ40757 fis, cl...    93   6e-23
AF352828_1(AF352828|pid:none) Homo sapiens Na,K-ATPase alpha-4 s...    93   6e-23
(Q9WV27) RecName: Full=Sodium/potassium-transporting ATPase subu...    92   8e-23
(P30714) RecName: Full=Sodium/potassium-transporting ATPase subu...    94   8e-23

 psg: 0.97  gvh: 0.66  alm: 0.23  top: 0.80  tms: 0.13  mit: 0.15  mip: 0.00
 nuc: 0.06  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 1.00  m_ : 0.00 

	 32.0 %: endoplasmic reticulum
	 24.0 %: plasma membrane
	 12.0 %: mitochondrial
	 12.0 %: vacuolar
	  8.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: cytoplasmic

>> prediction for SHE320 is end

>SHE320Z.Seq
NNNNNNNNNNGTTTCTTTGTACTTCAAATGCCAGTAGCTTTATCAGGTATTTTAATTCTT
TGTATAGATTTGGGTACTGATCTTATTCCCTGTAATATCTTATGCATACGAAGGTAGTGA
AACTGATCTCATGAAAAGAAAACCAAGAAATGTTAAAAAAGATAAATTGGTTAGTCTTAG
ATTGGCTATTTTCTCTTATCTCTGGTTAGGTTGTTGGCAATGTGCTGCTGGTTTCTTAAA
TTATTTCCTCCTTTTCAAGGATTATGGATATAGTGCTTCCGACCTTTACAATGTTTCCTC
TACCTATTTCAAGAAAGATGCTCCACTTTATGGAGGTCATGATGATGCTAAACAAATTCA
AATTTTAAATGAAGCTCAAACTGCATATTTCATCGCGATTGTAATAAGTAGAGTTGGGGC
TTGTTTCTGCGCTAAAACTAGAATCATTTCAATTTTCCAACAAGGTTTCGGTAATATGGT
ATTCAATTTCGGTGTTTGTTCTATGCTTGCCATTGCTCTATTCATTGTTCATGTACCAGG
TGTTAGAACTTTCTTTGGTTGTACTATTGTCAGTTATAAATATT