>SHD841 (SHD841Q) /CSM/SH/SHD8-B/SHD841Q.Seq.d/
ATTTAATAATAATAATTTAATTTTTTTCATAGTATTCAAAGATATAATGAAAAACTTTTA
TTATTTTATATTAATTTTATTATTTTTTAATGAAGTTTGCTATTCATTAAAAGATGGTGA
AATTAAACTTCATTTAATTCCACATTCACATTGTGATTCTGGATGGACATCAACAATGAA
CGAATATTATATGGGTCAAGTTAAAAGTATTATATCATCAATGGTTCAATCATTAAATGT
TGAACCAAATCCACCTAGAAAATTTGTTTGGTCTGAAATTGGATTTTTAGAACAATGATG
GGATGATATGCCAATTGAAATTAAAAATGATTTTATAAAACATGTTAAAAATGATAGAAT
TGAATTTGTAAATGGTGGATGGGTAATGAATGATGAAGCATGTGCAAGTTTAGAAAGTGT
AATTAGACAATTATCAAATGGACATAAATTTATTAGAGAGAAATTTGGAAAACAACCAGA
GAGTGGATGGCAAATTGATCCATTTGGACATTCATCATTGACACCAACATTACAAGCTCA
ATTTGGTTATAAACATGTTGTATTGAATCGTATTCACTATGAATTGAAAAXXXXXXXXXX

FNNNNLIFFIVFKDIMKNFYYFILILLFFNEVCYSLKDGEIKLHLIPHSHCDSGWTSTMN
EYYMGQVKSIISSMVQSLNVEPNPPRKFVWSEIGFLEQ*wddmpieikndfikhvkndri
efvnggwvmndeacaslesvirqlsnghkfirekfgkqpesgwqidpfghssltptlqaq
fgykhvvlnrihyelk---

Frame A:
i****fnffhsiqryneklllfyinfiif**sllfikrw*n*tsfnstftl*fwmdinne
rilygss*kyyiingsiikc*tkst*kiclv*nwifrtmmg*yan*n*k*fyktc*k**n
*ickwwmgne**smckfrkcn*tiikwt*iy*reiwkttrewman*siwtfiidtnitss
iwl*tcciesysl*ie---


Frame B:
FNNNNLIFFIVFKDIMKNFYYFILILLFFNEVCYSLKDGEIKLHLIPHSHCDSGWTSTMN
EYYMGQVKSIISSMVQSLNVEPNPPRKFVWSEIGFLEQ*wddmpieikndfikhvkndri
efvnggwvmndeacaslesvirqlsnghkfirekfgkqpesgwqidpfghssltptlqaq
fgykhvvlnrihyelk---


Frame C:
liiii*ffs*yski**ktfiily*fyyflmkfaih*kmvklnfi*fhihivildghqq*t
niiwvklkvlyhqwfnh*mlnqihlenlfglkldf*nndgmicqlklkmil*nmlkmiel
nl*mvdg**mmkhvqv*kv*ldnyqmdinllernlennqrvdgklihldihh*hqhykln
lvinmly*ivftmn*---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHD841 (SHD841Q) /CSM/SH/SHD8-B/SHD841Q.Seq.d/                        993   0.0
SHB362 (SHB362Q) /CSM/SH/SHB3-C/SHB362Q.Seq.d/                        985   0.0
SHL340 (SHL340Q) /CSM/SH/SHL3-B/SHL340Q.Seq.d/                        977   0.0
SHL334 (SHL334Q) /CSM/SH/SHL3-B/SHL334Q.Seq.d/                        977   0.0
SHL308 (SHL308Q) /CSM/SH/SHL3-A/SHL308Q.Seq.d/                        977   0.0
SHL163 (SHL163Q) /CSM/SH/SHL1-C/SHL163Q.Seq.d/                        977   0.0
SHK566 (SHK566Q) /CSM/SH/SHK5-C/SHK566Q.Seq.d/                        977   0.0
SHK514 (SHK514Q) /CSM/SH/SHK5-A/SHK514Q.Seq.d/                        977   0.0
SHK450 (SHK450Q) /CSM/SH/SHK4-C/SHK450Q.Seq.d/                        977   0.0
SHK365 (SHK365Q) /CSM/SH/SHK3-C/SHK365Q.Seq.d/                        977   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

CF445746|CF445746.1 EST682091 normalized cDNA library of onion Allium cepa cDNA cloneACAHS20, mRNA sequence.    60   1e-08  2
BQ593037|BQ593037.1 E012375-024-028-C05-SP6 MPIZ-ADIS-024-developing root Beta vulgaris cDNA clone 024-028-C05 5-PRIME, mRNA sequence.    44   2e-06  2
CF196667|CF196667.1 Ir64bi1.6_B04 IR64-BI Oryza sativa (indica cultivar-group) cDNA clone IR64-BI1.6B04 5', mRNA sequence.    56   3e-05  2
BG449666|BG449666.1 NF055D11IN1F1092 Insect herbivory Medicago truncatula cDNA clone NF055D11IN 5', mRNA sequence.    58   2e-04  1
BQ141173|BQ141173.1 NF016G07PH1F1056 Phoma-infected Medicago truncatula cDNA clone NF016G07PH 5', mRNA sequence.    58   2e-04  1
DN812276|M2A1_RAT Alpha-mannosidase II (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase) (MAN II) (Golgi alpha-mannosidase II) (Mannosidase alpha class 2A member 1), mRNA sequence.    56   0.001  1
CV688215|CV688215.1 sjs2-16-2_G01_sjs2-16-2G01-T3 SJS Schistosoma japonicum cDNA, mRNA sequence.    56   0.001  1
CV682907|CV682907.1 service43_H06_sjs2-16-2B11-T3 SJS Schistosoma japonicum cDNA, mRNA sequence.    56   0.001  1
CV682854|CV682854.1 service30_G09_sjs2-14-10C09-T3 SJS Schistosoma japonicum cDNA, mRNA sequence.    56   0.001  1
BU804021|BU804021.1 SJFBFG06 SJF Schistosoma japonicum cDNA, mRNA sequence.    56   0.001  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54YC4) RecName: Full=Alpha-mannosidase D;          EC=3.2.1.24...   142   5e-33
(Q54YF7) RecName: Full=Alpha-mannosidase B;          EC=3.2.1.24...   139   4e-32
AB011474_23(AB011474|pid:none) Arabidopsis thaliana genomic DNA,...   137   2e-31
BC142656_1(BC142656|pid:none) Homo sapiens mannosidase, alpha, c...   134   1e-30
AL391146_7(AL391146|pid:none) Arabidopsis thaliana DNA chromosom...   134   1e-30
(P27046) RecName: Full=Alpha-mannosidase 2;          EC=3.2.1.11...   134   2e-30
AC148217_12(AC148217|pid:none) Medicago truncatula clone mth2-20...   134   2e-30
(P28494) RecName: Full=Alpha-mannosidase 2;          EC=3.2.1.11...   132   5e-30
M24353_1(M24353|pid:none) Rattus norvegicus alpha-mannosidase II...   132   5e-30
AK161799_1(AK161799|pid:none) Mus musculus 13 days embryo male t...   132   9e-30

 psg: 0.94  gvh: 0.66  alm: 0.50  top: 0.43  tms: 0.00  mit: 0.16  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: extracellular, including cell wall
	 24.0 %: cytoplasmic
	 16.0 %: nuclear
	 12.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: vacuolar

>> prediction for SHD841 is exc

>SHD841F.Seq
ATTTAATAATAATAATTTAATTTTTTTCATAGTATTCAAAGATATAATGAAAAACTTTTA
TTATTTTATATTAATTTTATTATTTTTTAATGAAGTTTGCTATTCATTAAAAGATGGTGA
AATTAAACTTCATTTAATTCCACATTCACATTGTGATTCTGGATGGACATCAACAATGAA
CGAATATTATATGGGTCAAGTTAAAAGTATTATATCATCAATGGTTCAATCATTAAATGT
TGAACCAAATCCACCTAGAAAATTTGTTTGGTCTGAAATTGGATTTTTAGAACAATGATG
GGATGATATGCCAATTGAAATTAAAAATGATTTTATAAAACATGTTAAAAATGATAGAAT
TGAATTTGTAAATGGTGGATGGGTAATGAATGATGAAGCATGTGCAAGTTTAGAAAGTGT
AATTAGACAATTATCAAATGGACATAAATTTATTAGAGAGAAATTTGGAAAACAACCAGA
GAGTGGATGGCAAATTGATCCATTTGGACATTCATCATTGACACCAACATTACAAGCTCA
ATTTGGTTATAAACATGTTGTATTGAATCGTATTCACTATGAATTGAAAANNNNNNNNNN