>SHD826 (SHD826Q) /CSM/SH/SHD8-B/SHD826Q.Seq.d/
XXXXXXXXXXAACAACTGGCAGGGCTACAGGTCATTACACAGAATCAGGTACAGGTAATC
CACATTTATGTGATAGATATCATTGTAAAAGAGGAATGGAATGTCATGTTGTTAATGGTG
TTCCAGAATGTTTACCATCAAACTACAAATGTTTAGATTGTTTAGATCTTCATTGTGAGA
GACAAGGTGATTTCACCTGTTTTATGGTTAAAAATCCAAATTTCATTTCTAGTAAACATA
GTTGTTATGGTGAATCATGTTGTAAATTCACACCAGTTTGCAAACCAAAAGGACACTCAC
TTTAAA

---TTGRATGHYTESGTGNPHLCDRYHCKRGMECHVVNGVPECLPSNYKCLDCLDLHCER
QGDFTCFMVKNPNFISSKHSCYGESCCKFTPVCKPKGHSL*

Frame A:
---TTGRATGHYTESGTGNPHLCDRYHCKRGMECHVVNGVPECLPSNYKCLDCLDLHCER
QGDFTCFMVKNPNFISSKHSCYGESCCKFTPVCKPKGHSL*


Frame B:
---qlaglqvitqnqvqvihiyvidiivkeewnvmllmvfqnvyhqttnv*iv*ifivrd
kvispvlwlkiqisflvnivvmvnhvvnshqfanqkdthfk


Frame C:
---nwqgyrslhriryr*stfm**isl*krngmscc*wcsrmftiklqmfrlfrssl*et
r*fhlfyg*kskfhf**t*llw*iml*ihtslqtkrtltl

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSD478 (SSD478Q) /CSM/SS/SSD4-D/SSD478Q.Seq.d/                        587   e-167
SSA704 (SSA704Q) /CSM/SS/SSA7-A/SSA704Q.Seq.d/                        587   e-167
SLE329 (SLE329Q) /CSM/SL/SLE3-B/SLE329Q.Seq.d/                        587   e-167
SHL588 (SHL588Q) /CSM/SH/SHL5-D/SHL588Q.Seq.d/                        587   e-167
SHL169 (SHL169Q) /CSM/SH/SHL1-C/SHL169Q.Seq.d/                        587   e-167
SHK884 (SHK884Q) /CSM/SH/SHK8-D/SHK884Q.Seq.d/                        587   e-167
SHK788 (SHK788Q) /CSM/SH/SHK7-D/SHK788Q.Seq.d/                        587   e-167
SHK535 (SHK535Q) /CSM/SH/SHK5-B/SHK535Q.Seq.d/                        587   e-167
SHJ893 (SHJ893Q) /CSM/SH/SHJ8-D/SHJ893Q.Seq.d/                        587   e-167
SHJ886 (SHJ886Q) /CSM/SH/SHJ8-D/SHJ886Q.Seq.d/                        587   e-167

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AL161506|AL161506.2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 18.    42   0.16   3
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 map 1418423-1684967 strain AX4, complete sequence.    44   0.45   2
AC175219|AC175219.2 Aotus nancymaae clone CH258-29H23, WORKING DRAFT SEQUENCE, 3 ordered pieces.    38   1.3    3
CV752175|CV752175.1 SJL6-009_A06_SJL6-009A06-T3_039.ab1 SJL Schistosoma japonicum cDNA, mRNA sequence.    44   1.7    1
CV752026|CV752026.1 SJL6-007_B08_SJL6-007B08-T3_063.ab1 SJL Schistosoma japonicum cDNA, mRNA sequence.    44   1.7    1
CV739281|CV739281.1 SJAL_019_73.T3 SJL Schistosoma japonicum cDNA, mRNA sequence.    44   1.7    1
CV682259|CV682259.1 sjs6-009_H10_sjs6-009H10-T3 SJS Schistosoma japonicum cDNA, mRNA sequence.    44   1.7    1
CV739266|CV739266.1 SJAL_019_64.T3 SJL Schistosoma japonicum cDNA, mRNA sequence.    44   1.7    1
CV581768|CV581768.1 sjmi-1-002_E12_sjmi-1-002E12-T3 Schistosoma japonicum miracidium cDNA Schistosoma japonicum cDNA, mRNA sequence.    44   1.7    1
BU725144|BU725144.1 SJMBXF01 SJM Schistosoma japonicum cDNA, mRNA sequence.    44   1.7    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54C31) RecName: Full=Protein psiR; Flags: Precursor;                226   2e-58
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor;                155   4e-37
AF245486_1(AF245486|pid:none) Polysphondylium pallidum spore coa...    45   6e-04
S07638(S07638;A60942;B60942) spore coat protein SP96 precursor -...    44   0.002
(P14328) RecName: Full=Spore coat protein SP96;  &AC117075_49(AC...    44   0.002
(P15269) RecName: Full=Spore coat protein SP70; AltName: Full=Pr...    42   0.009
(Q54QX2) RecName: Full=Probable spore coat protein DDB_G0283555;...    41   0.011
(Q54FD8) RecName: Full=Protein psiD; Flags: Precursor;                 39   0.055
AC117267_7(AC117267|pid:none) Dictyostelium discoideum chromosom...    37   0.16
AB011475_1(AB011475|pid:none) Arabidopsis thaliana genomic DNA, ...    37   0.16

 psg: 0.75  gvh: 0.33  alm: 0.57  top: 0.53  tms: 0.00  mit: 0.26  mip: 0.02
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 40.0 %: nuclear
	 16.0 %: mitochondrial
	  4.0 %: cytoskeletal

>> prediction for SHD826 is cyt

>SHD826Z.Seq
NNNNNNNNNNAACAACTGGCAGGGCTACAGGTCATTACACAGAATCAGGTACAGGTAATC
CACATTTATGTGATAGATATCATTGTAAAAGAGGAATGGAATGTCATGTTGTTAATGGTG
TTCCAGAATGTTTACCATCAAACTACAAATGTTTAGATTGTTTAGATCTTCATTGTGAGA
GACAAGGTGATTTCACCTGTTTTATGGTTAAAAATCCAAATTTCATTTCTAGTAAACATA
GTTGTTATGGTGAATCATGTTGTAAATTCACACCAGTTTGCAAACCAAAAGGACACTCAC
TTTAAA