>SHD160 (SHD160Q) /CSM/SH/SHD1-C/SHD160Q.Seq.d/
TGGCCTACTGGAAAATAAAATTCATTTAATAATAATAATTTAATTTTTTTCATAGTATTC
AAAGATATAATGAAAAACTTTTATTATTTTATATTAATTTTATTATTTTTTAATGAAGTT
TGCTATTCATTAAAAGATGGTGAAATTAAACTTCATTTAATTCCACATTCACATTGTGAT
TCTGGATGGACATCAACAATGAACGAATATTATATGGGTCAAGTTAAAAGTATTATATCA
TCAATGGTTCAATCATTAAATGTTGAATCAAATCCACCTAGAAAATTTGTTTGGTCTGAA
ATTGGATTTTTAGAACAATGGTGGGATGATATGCCAATTGAAATTAAAAATGATTTTATA
AAACATGTTAAAAATGATAGAATTGAATTTGTAAATGGTGGATGGGTAATGAATGATGAA
GCATGTGCAAGTTTAGAAAGTGTAATTAGACAATTATCAAATGGACATAAATTTATTAGA
GAGAAATTTGGAAAACAACCAGAGAGTGGATGGCAAATTGATCCATTTGGACATTCATCA
TTGACACCAACATTACAAGCTCAATTTGGTTATAAACATGTTGTATTGAATCGTATTCAC
TATGAATTGAAAAAGAAATTTAAAGAAGAAAAGAXXXXXXXXXX

wptgk*NSFNNNNLIFFIVFKDIMKNFYYFILILLFFNEVCYSLKDGEIKLHLIPHSHCD
SGWTSTMNEYYMGQVKSIISSMVQSLNVESNPPRKFVWSEIGFLEQWWDDMPIEIKNDFI
KHVKNDRIEFVNGGWVMNDEACASLESVIRQLSNGHKFIREKFGKQPESGWQIDPFGHSS
LTPTLQAQFGYKHVVLNRIHYELKKKFKEEK---

Frame A:
wptgk*NSFNNNNLIFFIVFKDIMKNFYYFILILLFFNEVCYSLKDGEIKLHLIPHSHCD
SGWTSTMNEYYMGQVKSIISSMVQSLNVESNPPRKFVWSEIGFLEQWWDDMPIEIKNDFI
KHVKNDRIEFVNGGWVMNDEACASLESVIRQLSNGHKFIREKFGKQPESGWQIDPFGHSS
LTPTLQAQFGYKHVVLNRIHYELKKKFKEEK---


Frame B:
gllenkihliiii*ffs*yski**ktfiily*fyyflmkfaih*kmvklnfi*fhihivi
ldghqq*tniiwvklkvlyhqwfnh*mlnqihlenlfglkldf*nnggmicqlklkmil*
nmlkmielnl*mvdg**mmkhvqv*kv*ldnyqmdinllernlennqrvdgklihldihh
*hqhyklnlvinmly*ivftmn*krnlkkk---


Frame C:
aywkikfi****fnffhsiqryneklllfyinfiif**sllfikrw*n*tsfnstftl*f
wmdinnerilygss*kyyiingsiikc*ikst*kiclv*nwifrtmvg*yan*n*k*fyk
tc*k**n*ickwwmgne**smckfrkcn*tiikwt*iy*reiwkttrewman*siwtfii
dtnitssiwl*tcciesysl*iekei*rrk---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHL340 (SHL340Q) /CSM/SH/SHL3-B/SHL340Q.Seq.d/                       1035   0.0
SHL163 (SHL163Q) /CSM/SH/SHL1-C/SHL163Q.Seq.d/                       1035   0.0
SHK514 (SHK514Q) /CSM/SH/SHK5-A/SHK514Q.Seq.d/                       1035   0.0
SHK365 (SHK365Q) /CSM/SH/SHK3-C/SHK365Q.Seq.d/                       1035   0.0
SHJ720 (SHJ720Q) /CSM/SH/SHJ7-A/SHJ720Q.Seq.d/                       1035   0.0
SHJ609 (SHJ609Q) /CSM/SH/SHJ6-A/SHJ609Q.Seq.d/                       1035   0.0
SHJ369 (SHJ369Q) /CSM/SH/SHJ3-C/SHJ369Q.Seq.d/                       1035   0.0
SHI833 (SHI833Q) /CSM/SH/SHI8-B/SHI833Q.Seq.d/                       1035   0.0
SHI789 (SHI789Q) /CSM/SH/SHI7-D/SHI789Q.Seq.d/                       1035   0.0
SHI645 (SHI645Q) /CSM/SH/SHI6-B/SHI645Q.Seq.d/                       1035   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

CF445746|CF445746.1 EST682091 normalized cDNA library of onion Allium cepa cDNA cloneACAHS20, mRNA sequence.    60   1e-08  2
BQ593037|BQ593037.1 E012375-024-028-C05-SP6 MPIZ-ADIS-024-developing root Beta vulgaris cDNA clone 024-028-C05 5-PRIME, mRNA sequence.    44   3e-06  2
CF196667|CF196667.1 Ir64bi1.6_B04 IR64-BI Oryza sativa (indica cultivar-group) cDNA clone IR64-BI1.6B04 5', mRNA sequence.    56   3e-05  2
BQ141173|BQ141173.1 NF016G07PH1F1056 Phoma-infected Medicago truncatula cDNA clone NF016G07PH 5', mRNA sequence.    58   2e-04  1
BG449666|BG449666.1 NF055D11IN1F1092 Insect herbivory Medicago truncatula cDNA clone NF055D11IN 5', mRNA sequence.    58   2e-04  1
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4, complete sequence.    46   3e-04  5
DN812276|M2A1_RAT Alpha-mannosidase II (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase) (MAN II) (Golgi alpha-mannosidase II) (Mannosidase alpha class 2A member 1), mRNA sequence.    56   0.001  1
CV688215|CV688215.1 sjs2-16-2_G01_sjs2-16-2G01-T3 SJS Schistosoma japonicum cDNA, mRNA sequence.    56   0.001  1
CV682907|CV682907.1 service43_H06_sjs2-16-2B11-T3 SJS Schistosoma japonicum cDNA, mRNA sequence.    56   0.001  1
CV682854|CV682854.1 service30_G09_sjs2-14-10C09-T3 SJS Schistosoma japonicum cDNA, mRNA sequence.    56   0.001  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54YC4) RecName: Full=Alpha-mannosidase D;          EC=3.2.1.24...   147   3e-34
(Q54YF7) RecName: Full=Alpha-mannosidase B;          EC=3.2.1.24...   145   7e-34
BC142656_1(BC142656|pid:none) Homo sapiens mannosidase, alpha, c...   139   5e-32
AB011474_23(AB011474|pid:none) Arabidopsis thaliana genomic DNA,...   139   5e-32
(P27046) RecName: Full=Alpha-mannosidase 2;          EC=3.2.1.11...   139   9e-32
AC148217_12(AC148217|pid:none) Medicago truncatula clone mth2-20...   137   2e-31
(P28494) RecName: Full=Alpha-mannosidase 2;          EC=3.2.1.11...   137   3e-31
M24353_1(M24353|pid:none) Rattus norvegicus alpha-mannosidase II...   137   3e-31
AL391146_7(AL391146|pid:none) Arabidopsis thaliana DNA chromosom...   137   3e-31
AK161799_1(AK161799|pid:none) Mus musculus 13 days embryo male t...   135   7e-31

 psg: 0.94  gvh: 0.66  alm: 0.50  top: 0.47  tms: 0.00  mit: 0.29  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: extracellular, including cell wall
	 16.0 %: nuclear
	 12.0 %: cytoplasmic
	  8.0 %: mitochondrial
	  8.0 %: vacuolar
	  8.0 %: endoplasmic reticulum
	  4.0 %: Golgi

>> prediction for SHD160 is exc

>SHD160F.Seq
TGGCCTACTGGAAAATAAAATTCATTTAATAATAATAATTTAATTTTTTTCATAGTATTC
AAAGATATAATGAAAAACTTTTATTATTTTATATTAATTTTATTATTTTTTAATGAAGTT
TGCTATTCATTAAAAGATGGTGAAATTAAACTTCATTTAATTCCACATTCACATTGTGAT
TCTGGATGGACATCAACAATGAACGAATATTATATGGGTCAAGTTAAAAGTATTATATCA
TCAATGGTTCAATCATTAAATGTTGAATCAAATCCACCTAGAAAATTTGTTTGGTCTGAA
ATTGGATTTTTAGAACAATGGTGGGATGATATGCCAATTGAAATTAAAAATGATTTTATA
AAACATGTTAAAAATGATAGAATTGAATTTGTAAATGGTGGATGGGTAATGAATGATGAA
GCATGTGCAAGTTTAGAAAGTGTAATTAGACAATTATCAAATGGACATAAATTTATTAGA
GAGAAATTTGGAAAACAACCAGAGAGTGGATGGCAAATTGATCCATTTGGACATTCATCA
TTGACACCAACATTACAAGCTCAATTTGGTTATAAACATGTTGTATTGAATCGTATTCAC
TATGAATTGAAAAAGAAATTTAAAGAAGAAAAGANNNNNNNNNN