>SHC777 (SHC777Q) /CSM/SH/SHC7-D/SHC777Q.Seq.d/
ATTATATTTAATAGTTTAAAACTAAAATATCAAGATGCATGTGTTAAATTTATTGTTTTT
AATAGTAATAATTAATATTTTAATTTTTTCTGTACAATCATATACCTTGAAAAAGTATGA
TAATGGTCAGTTTTTTGTTATCGCCAGTGGGCCAGTAATTAATGAAAAATTTAATGTTCC
AAATCACCAGGTATCAAAATTTTTACTAACAAAAGATGAATATGATTCTGTTTCAGTGCA
GCTTCGTATCACATCTGATGGAGCACCAGAATCTTTAATCTTTTCCAGTACTTTTAGTGA
TAAAACAAACATGACATATACTACCACTCCATTGGAATACTCAATGTGTATCCCTCGTGA
CTTGTCTTTTTCAATCAAAATGAACAATTACCTCTTGGGTGGTGATTACATTATCTCAAT
TCAAGGTACCTCTGATGTTTCAAAATGCTACGAGCATGTCCCAGTAAACCAAGCTAACCA
AGAACCTGAAAGTATTGTATTAACATCTTCTGAACAACTTGTTATACAATCTGATGGCAC
ACTTAAAATGTATGTCACTGATTATGATGACGATAAAAATATAAAGTATCAAAAATCAAC
TGCTTCAACACCACTAGXXXXXXXXXX

lyliv*n*NIKMHVLNLLFLIVIINILIFSVQSYTLKKYDNGQFFVIASGPVINEKFNVP
NHQVSKFLLTKDEYDSVSVQLRITSDGAPESLIFSSTFSDKTNMTYTTTPLEYSMCIPRD
LSFSIKMNNYLLGGDYIISIQGTSDVSKCYEHVPVNQANQEPESIVLTSSEQLVIQSDGT
LKMYVTDYDDDKNIKYQKSTASTPL---

Frame A:
iifnslklkyqdacvkfivfnsnn*yfnffctiiylekv**wsvfcyrqwasn**ki*cs
kspgikiftnkr*i*fcfsaasyhi*wstrifnlfqyf***nkhdiyyhsigilnvyps*
lvffnqneqlplgw*lhylnsryl*cfkmlracpskps*prt*kycinif*ttcyti*wh
t*nvch*l**r*kykvskincfntt---


Frame B:
lyliv*n*NIKMHVLNLLFLIVIINILIFSVQSYTLKKYDNGQFFVIASGPVINEKFNVP
NHQVSKFLLTKDEYDSVSVQLRITSDGAPESLIFSSTFSDKTNMTYTTTPLEYSMCIPRD
LSFSIKMNNYLLGGDYIISIQGTSDVSKCYEHVPVNQANQEPESIVLTSSEQLVIQSDGT
LKMYVTDYDDDKNIKYQKSTASTPL---


Frame C:
yi**fktkisrcmc*iycf****lif*fflynhip*ksmimvsfllspvgq*lmknlmfq
itryqnfy*qkmnmilfqcsfvshlmehqnl*sfpvllvikqt*hilplhwntqcvslvt
clfqsk*titswvvitlsqfkvplmfqnatsmsq*tkltknlkvly*hllnnllynlmah
lkcmslimmtiki*siknqllqhh---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHC777 (SHC777Q) /CSM/SH/SHC7-D/SHC777Q.Seq.d/                       1047   0.0
SSK892 (SSK892Q) /CSM/SS/SSK8-D/SSK892Q.Seq.d/                       1039   0.0
CHH669 (CHH669Q) /CSM/CH/CHH6-C/CHH669Q.Seq.d/                       1039   0.0
AHF872 (AHF872Q) /CSM/AH/AHF8-C/AHF872Q.Seq.d/                       1039   0.0
AFL668 (AFL668Q) /CSM/AF/AFL6-C/AFL668Q.Seq.d/                       1039   0.0
AFI396 (AFI396Q) /CSM/AF/AFI3-D/AFI396Q.Seq.d/                       1039   0.0
SSG491 (SSG491Q) /CSM/SS/SSG4-D/SSG491Q.Seq.d/                       1031   0.0
SHK402 (SHK402Q) /CSM/SH/SHK4-A/SHK402Q.Seq.d/                       1031   0.0
CHS121 (CHS121Q) /CSM/CH/CHS1-A/CHS121Q.Seq.d/                       1031   0.0
CHO666 (CHO666Q) /CSM/CH/CHO6-C/CHO666Q.Seq.d/                       1031   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

DR513342|DR513342.1 WS02735.CR_K12 SS-IL-A-FL-14 Picea sitchensis cDNA cloneWS02735_K12 3, mRNA sequence.    36   0.50   2
AC146164|AC146164.3 Pan troglodytes BAC clone RP43-24F8 from 7, complete sequence.    46   0.89   1
AC149105|AC149105.2 Papio anubis clone RP41-135I20, WORKING DRAFT SEQUENCE, 6 ordered pieces.    38   1.3    4
DV085135|DV085135.1 327-384-15_I19_KS Nematostella vectensis normalized cDNA library 327 Nematostella vectensis cDNA clone 327-384-15_I19_KS, mRNA sequence.    44   3.5    1
CB413506|CB413506.1 ScaE_2115 Bay scallop Uni-ZAP XR Expression Library Argopecten irradians cDNA 5' similar to Argopecten irradians cDNA library, unknown, mRNA sequence.    44   3.5    1
CB632920|CB632920.1 ---.    44   3.5    1
CB632243|CB632243.1 ---.    44   3.5    1
BB445032|BB445032.1 Mus musculus 9 days embryo cDNA, RIKEN full-length enriched library, clone:D030048K07, 3' end partial sequence, similar to ddbj:AB037732 Homo sapiens mRNA for KIAA1311 protein.    44   3.5    1
A92835|A92835.1 Sequence 9 from Patent WO9804586.                  44   3.5    1
AC053487|AC053487.3 Homo sapiens chromosome 3 clone RP11-119D18, WORKING DRAFT SEQUENCE, 2 unordered pieces.    44   3.5    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP000512_995(CP000512|pid:none) Acidovorax avenae subsp. citrull...    34   3.7
AY093107_1(AY093107|pid:none) Arabidopsis thaliana unknown prote...    34   3.7
AM412317_259(AM412317|pid:none) Clostridium botulinum A str. ATC...    34   3.7
CP000728_773(CP000728|pid:none) Clostridium botulinum F str. Lan...    33   6.3
CP000745_478(CP000745|pid:none) Methanococcus maripaludis C7, co...    33   6.3
CP000507_144(CP000507|pid:none) Shewanella amazonensis SB2B, com...    33   8.3
EU839994_92(EU839994|pid:none) Agrotis ipsilon multiple nucleopo...    33   8.3

 psg: 1.00  gvh: 0.56  alm: 0.16  top: 0.43  tms: 0.07  mit: 0.29  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 28.0 %: endoplasmic reticulum
	 20.0 %: cytoplasmic
	 20.0 %: nuclear
	 12.0 %: mitochondrial
	  8.0 %: Golgi
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system
	  4.0 %: extracellular, including cell wall

>> prediction for SHC777 is end

>SHC777F.Seq
ATTATATTTAATAGTTTAAAACTAAAATATCAAGATGCATGTGTTAAATTTATTGTTTTT
AATAGTAATAATTAATATTTTAATTTTTTCTGTACAATCATATACCTTGAAAAAGTATGA
TAATGGTCAGTTTTTTGTTATCGCCAGTGGGCCAGTAATTAATGAAAAATTTAATGTTCC
AAATCACCAGGTATCAAAATTTTTACTAACAAAAGATGAATATGATTCTGTTTCAGTGCA
GCTTCGTATCACATCTGATGGAGCACCAGAATCTTTAATCTTTTCCAGTACTTTTAGTGA
TAAAACAAACATGACATATACTACCACTCCATTGGAATACTCAATGTGTATCCCTCGTGA
CTTGTCTTTTTCAATCAAAATGAACAATTACCTCTTGGGTGGTGATTACATTATCTCAAT
TCAAGGTACCTCTGATGTTTCAAAATGCTACGAGCATGTCCCAGTAAACCAAGCTAACCA
AGAACCTGAAAGTATTGTATTAACATCTTCTGAACAACTTGTTATACAATCTGATGGCAC
ACTTAAAATGTATGTCACTGATTATGATGACGATAAAAATATAAAGTATCAAAAATCAAC
TGCTTCAACACCACTAGNNNNNNNNNN