>SHC181 (SHC181Q) /CSM/SH/SHC1-D/SHC181Q.Seq.d/
XXXXXXXXXXGTTANGATTTTGGTTTTTACTTGGATATTCAAAATTCAATTGATCAANAT
TTNAAANATANAGCTAAATGGGNTAAAAAATCAATTANGGCTTCAGTTTGTTGNGGTAAA
TTCAGTTNAGATANAACCATTAAANAGTATGNTCAACAAATTTGGGGTATTGAANAATGG
AANANACCAGGTCCAGTTCCAGTTTNAAANGAANAAGCTCGTTNTTTATTAGTTCCNCCA
CCATTTGGTTCACCAAATGANATCAATGNTATNTCAATTGAAANATTATCACCTTTAACT
TTTGTTAAACAAANTTNTGNTTTTCCATTATNTGTTATNTCTGGTGGTGATAAAACCAAC
AACNCTTTAAAACCAAAACAAACTAC

---XDFGFYLDIQNSIDQXXKXXAKWXKKSIXASVCXGKFSXDXTIKXYXQQIWGIEXWX
XPGPVPVXXEXARXLLVPPPFGSPNXINXXSIEXLSPLTFVKQXXXFPLXVXSGGDKTNN
XLKPKQT

Frame A:
---lxfwfllgyskfn*sxfxxxs*mg*kinxgfsllx*iqxrxnh*xvxstnlgy*xme
xtrssssxkxxssxfissxtiwftk*xqxyxn*xiitfnfc*txxxfsixcyxww**nqq
xfktktny


Frame B:
---XDFGFYLDIQNSIDQXXKXXAKWXKKSIXASVCXGKFSXDXTIKXYXQQIWGIEXWX
XPGPVPVXXEXARXLLVPPPFGSPNXINXXSIEXLSPLTFVKQXXXFPLXVXSGGDKTNN
XLKPKQT


Frame C:
---xilvftwifkiqlixixxixlngxknqlxlqfvxvnsvxixplxsmxnkfgvlxngx
xqvqfqfxxxklvxy*fxhhlvhqmxsmxxqlkxyhl*lllnkxxxfhyxlxlvvikptt
l*nqnkl

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHC181 (SHC181Q) /CSM/SH/SHC1-D/SHC181Q.Seq.d/                        567   e-161
SSE676 (SSE676Q) /CSM/SS/SSE6-D/SSE676Q.Seq.d/                        543   e-154
SSA564 (SSA564Q) /CSM/SS/SSA5-C/SSA564Q.Seq.d/                        543   e-154
SHL702 (SHL702Q) /CSM/SH/SHL7-A/SHL702Q.Seq.d/                        543   e-154
SHL445 (SHL445Q) /CSM/SH/SHL4-B/SHL445Q.Seq.d/                        543   e-154
SHL248 (SHL248Q) /CSM/SH/SHL2-B/SHL248Q.Seq.d/                        543   e-154
SHL184 (SHL184Q) /CSM/SH/SHL1-D/SHL184Q.Seq.d/                        543   e-154
SHK334 (SHK334Q) /CSM/SH/SHK3-B/SHK334Q.Seq.d/                        543   e-154
SHK234 (SHK234Q) /CSM/SH/SHK2-B/SHK234Q.Seq.d/                        543   e-154
SHK175 (SHK175Q) /CSM/SH/SHK1-D/SHK175Q.Seq.d/                        543   e-154

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

M77492|M77492.1 Dictyostelium discoideum glycoprotein phosphorylase 2 (glpD) gene, complete cds.   543   e-151  1
AC124190|AC124190.4 Mus musculus chromosome 3 clone RP23-267M9, complete sequence.    46   0.52   1
AC156821|AC156821.2 Bos taurus clone CH240-60M1, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces.    38   0.56   2
AC151371|AC151371.4 Aotus nancymaae clone CH258-333O11, complete sequence.    42   1.1    2
AC148058|AC148058.4 Callicebus moloch clone LB5-358H21, complete sequence.    42   1.5    2
AC146925|AC146925.5 Callithrix jacchus clone CH259-254J2, complete sequence.    42   1.6    2
AC108940|AC108940.3 Homo sapiens BAC clone RP11-728F4 from 2, complete sequence.    44   2.1    1
AC152894|AC152894.3 Saimiri boliviensis boliviensis clone CH254-450C11, complete sequence.    42   5.9    2
AL713919|AL713919.11 Mouse DNA sequence from clone RP23-41F14 on chromosome 11.    40   6.0    2
AL928937|AL928937.3 Mouse DNA sequence *** SEQUENCING CANCELLED *** from clone  RP24-376H1.    40   6.4    2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP000584_198(CP000584|pid:none) Ostreococcus lucimarinus CCE9901...    55   1e-06
EU165056_1(EU165056|pid:none) Cyanophora paradoxa starch phospho...    54   2e-06
CR954204_212(CR954204|pid:none) Ostreococcus tauri strain OTTH05...    53   3e-06
(Q5R5M6) RecName: Full=Glycogen phosphorylase, brain form;      ...    52   5e-06
AF432222_1(AF432222|pid:none) Homo sapiens CLL-associated antige...    52   5e-06
A40138(A40138;A29949) glycogen phosphorylase (EC 2.4.1.1), brain...    52   5e-06
(Q9LKJ3) RecName: Full=Alpha-glucan phosphorylase, H isozyme;   ...    52   5e-06
(P11216) RecName: Full=Glycogen phosphorylase, brain form;      ...    52   5e-06
AK103367_1(AK103367|pid:none) Oryza sativa Japonica Group cDNA c...    52   6e-06
AF326977_1(AF326977|pid:none) Oryza sativa alpha 1,4-glucan phos...    52   6e-06

 psg: 0.75  gvh: 0.41  alm: 0.50  top: 0.53  tms: 0.00  mit: 0.08  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 24.0 %: nuclear
	 16.0 %: mitochondrial
	  8.0 %: vacuolar
	  8.0 %: peroxisomal

>> prediction for SHC181 is cyt

>SHC181Z.Seq
NNNNNNNNNNGTTANGATTTTGGTTTTTACTTGGATATTCAAAATTCAATTGATCAANAT
TTNAAANATANAGCTAAATGGGNTAAAAAATCAATTANGGCTTCAGTTTGTTGNGGTAAA
TTCAGTTNAGATANAACCATTAAANAGTATGNTCAACAAATTTGGGGTATTGAANAATGG
AANANACCAGGTCCAGTTCCAGTTTNAAANGAANAAGCTCGTTNTTTATTAGTTCCNCCA
CCATTTGGTTCACCAAATGANATCAATGNTATNTCAATTGAAANATTATCACCTTTAACT
TTTGTTAAACAAANTTNTGNTTTTCCATTATNTGTTATNTCTGGTGGTGATAAAACCAAC
AACNCTTTAAAACCAAAACAAACTAC