>SHB752 (SHB752Q) /CSM/SH/SHB7-C/SHB752Q.Seq.d/
XXXXXXXXXXGCAGTTCAAGAGGTTGAAGAAATTGGAAGACANCAAAATGGTAATGGTTC
ACNTGCTGTAAACTCTCATAAGATTGTAACTCAAATGGGAAATGTTGAAAATAATGAAAT
TACCAATGAACAAGATGCCATTGAACNAGCTCAACATTTACAACGTATTGAAAATGGTGA
AGATATCGATGAGTATGAAGCTGCCCAACATGAAGTTGCCTTTTTAGATGAAAATGAACA
AGATGCTGCTAAATTACAAAATGAAATGGACCAATTAGAACTCTTACTTGAAGAGAATGA
AGAAGAACAATTTTCAAATAAAAATTTACAACAACTTAATGAGAATGAAAATCAACAACA
ACAACAAGGACAACAACAAGTTCAAGCAACAAATGTTGAACAACAAATCGTTGAACAACT
TAAAGTTATCAAAGAATTTCAAAGACAAGATCAACAAAAGAAACAAAAAATTCAACAAGA
GAACGATGCTGTCTACTTGAGTGATGTTGAAAAAGCTCAACTTGAATTGGATGCTGAATT
GGCTAAAAATAATAAACAAGAGAATCAAGATGAGAATTTAGTTCAAGAGAAACAACAATC
TCNTGACCAAATTAAAAATCAATTAAAAAATATTCAACATGAACNACAAATCCAAGAACA
ACAAGATAAATTAAATCAAGAAAAAAATCAACNATTATTAGAACAAGAGACAAAGATCAA
AA

---VQEVEEIGRXQNGNGSXAVNSHKIVTQMGNVENNEITNEQDAIEXAQHLQRIENGED
IDEYEAAQHEVAFLDENEQDAAKLQNEMDQLELLLEENEEEQFSNKNLQQLNENENQQQQ
QGQQQVQATNVEQQIVEQLKVIKEFQRQDQQKKQKIQQENDAVYLSDVEKAQLELDAELA
KNNKQENQDENLVQEKQQSXDQIKNQLKNIQHEXQIQEQQDKLNQEKNQXLLEQETKIK

Frame A:
---qfkrlkkledxkmvmvhxl*tlirl*lkwemlkimklpmnkmplnxlniynvlkmvk
ismsmklpnmklpf*mkmnkmllnykmkwtn*nsylkrmkknnfqikiynnlmrmkinnn
nkdnnkfkqqmlnnkslnnlklsknfkdkinkrnkkfnkrtmlst*vmlkklnlnwmlnw
lkiinkrikmri*fkrnnnlxtklkin*kifnmnxksknnkin*ikkkinxy*nkrqrsk


Frame B:
---ssrg*rnwktxkw*wftcckls*dcnsngkc*k**nyq*trch*tsstftty*kw*r
yr*v*scpt*sclfr*k*trcc*itk*ngpirtlt*re*rrtifk*kfttt**e*ksttt
trtttsssnkc*ttnr*tt*syqrisktrstketknstrercclle*c*ksst*igc*ig
*k**tresr*efssrettis*pn*ksikkyst*ttnprttr*iksrkkstiirtrdkdq


Frame C:
---VQEVEEIGRXQNGNGSXAVNSHKIVTQMGNVENNEITNEQDAIEXAQHLQRIENGED
IDEYEAAQHEVAFLDENEQDAAKLQNEMDQLELLLEENEEEQFSNKNLQQLNENENQQQQ
QGQQQVQATNVEQQIVEQLKVIKEFQRQDQQKKQKIQQENDAVYLSDVEKAQLELDAELA
KNNKQENQDENLVQEKQQSXDQIKNQLKNIQHEXQIQEQQDKLNQEKNQXLLEQETKIK

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHB752 (SHB752Q) /CSM/SH/SHB7-C/SHB752Q.Seq.d/                        660   0.0
SHF251 (SHF251Q) /CSM/SH/SHF2-C/SHF251Q.Seq.d/                        652   0.0
SHF227 (SHF227Q) /CSM/SH/SHF2-B/SHF227Q.Seq.d/                        652   0.0
SHL894 (SHL894Q) /CSM/SH/SHL8-D/SHL894Q.Seq.d/                        646   0.0
SHF666 (SHF666Q) /CSM/SH/SHF6-C/SHF666Q.Seq.d/                        646   0.0
CHG372 (CHG372Q) /CSM/CH/CHG3-C/CHG372Q.Seq.d/                        646   0.0
SHL875 (SHL875Q) /CSM/SH/SHL8-D/SHL875Q.Seq.d/                        644   0.0
SHL866 (SHL866Q) /CSM/SH/SHL8-C/SHL866Q.Seq.d/                        644   0.0
SHL857 (SHL857Q) /CSM/SH/SHL8-C/SHL857Q.Seq.d/                        644   0.0
SHL828 (SHL828Q) /CSM/SH/SHL8-B/SHL828Q.Seq.d/                        644   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U25143|U25143.1 Dictyostelium discoideum cAMP-inducible prespore protein gene, complete cds.   644   0.0    4
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence.   127   3e-25  1
DT633626|DT633626.1 EST1148557 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMFW90 3' end, mRNA sequence.    48   0.25   1
DR686823|DR686823.1 EST1076901 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWABK24 3' end, mRNA sequence.    48   0.25   1
BQ699661|BQ699661.1 NXRV125_B09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV125_B09 5', mRNA sequence.    48   0.25   1
BP290409|BP290409.1 Homo sapiens cDNA clone: LNF05006, Sugano cDNA library, expressed in lung normal fibroblast.    48   0.25   1
AC124708|AC124708.2 Mus musculus chromosome 6 clone RP24-79O16, complete sequence.    48   0.25   1
AC090712|AC090712.4 Mus musculus chromosome 6 clone RP23-230F22 strain C57BL6/J, complete sequence.    48   0.25   1
AC117070|AC117070.2 Dictyostelium discoideum chromosome 2 map 2097701-2233941 strain AX4, complete sequence.    34   0.34   6
AB006702|AB006702.1 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPO12.    40   0.35   4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P54682) RecName: Full=cAMP-inducible prespore protein D7; Flags...   273   3e-72
AC117070_42(AC117070|pid:none) Dictyostelium discoideum chromoso...    37   0.59
AE016819_111(AE016819|pid:none) Ashbya gossypii (= Eremothecium ...    36   1.0
AF314648_2(AF314648|pid:none) Plasmodium vivax CG9 (cg9) gene, c...    35   1.7
(Q54F33) RecName: Full=Uncharacterized protein DDB_G0291143;           35   2.2
AJ969441_1(AJ969441|pid:none) Trypanosoma cruzi garp gene for gl...    35   2.2
AE016796_1436(AE016796|pid:none) Vibrio vulnificus CMCP6 chromos...    35   2.9
CP000806_1851(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu...    34   3.8
(P47048) RecName: Full=Uncharacterized protein YJL049W;  &AY6926...    33   8.5
AP009240_1649(AP009240|pid:none) Escherichia coli SE11 DNA, comp...    33   8.5

 psg: 0.75  gvh: 0.24  alm: 0.58  top: 0.53  tms: 0.00  mit: 0.16  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.50  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: nuclear
	 32.0 %: cytoplasmic
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: plasma membrane
	  4.0 %: endoplasmic reticulum

>> prediction for SHB752 is nuc

>SHB752Z.Seq
NNNNNNNNNNGCAGTTCAAGAGGTTGAAGAAATTGGAAGACANCAAAATGGTAATGGTTC
ACNTGCTGTAAACTCTCATAAGATTGTAACTCAAATGGGAAATGTTGAAAATAATGAAAT
TACCAATGAACAAGATGCCATTGAACNAGCTCAACATTTACAACGTATTGAAAATGGTGA
AGATATCGATGAGTATGAAGCTGCCCAACATGAAGTTGCCTTTTTAGATGAAAATGAACA
AGATGCTGCTAAATTACAAAATGAAATGGACCAATTAGAACTCTTACTTGAAGAGAATGA
AGAAGAACAATTTTCAAATAAAAATTTACAACAACTTAATGAGAATGAAAATCAACAACA
ACAACAAGGACAACAACAAGTTCAAGCAACAAATGTTGAACAACAAATCGTTGAACAACT
TAAAGTTATCAAAGAATTTCAAAGACAAGATCAACAAAAGAAACAAAAAATTCAACAAGA
GAACGATGCTGTCTACTTGAGTGATGTTGAAAAAGCTCAACTTGAATTGGATGCTGAATT
GGCTAAAAATAATAAACAAGAGAATCAAGATGAGAATTTAGTTCAAGAGAAACAACAATC
TCNTGACCAAATTAAAAATCAATTAAAAAATATTCAACATGAACNACAAATCCAAGAACA
ACAAGATAAATTAAATCAAGAAAAAAATCAACNATTATTAGAACAAGAGACAAAGATCAA
AA