>SHB239 (SHB239Q) /CSM/SH/SHB2-B/SHB239Q.Seq.d/
XXXXXXXXXXAATAGTGAAGGTGCTACTGGTGGTAATAGTGGTGCTGCAATTGGAGCNTA
ATAGTGGTGCTGCAANTGGAGCANATAGNGGCGCTGCANCTGNAGCAAATAGTGGTGNTG
CACCTGGTGCANATAGTGGAAACAANGCCGCTGTANCTGGTGCTGCAAATGNAAATAATG
GCGCTGCAGCTGGAGCAAATAGTGGTGCCGCAACTGCTGCAAATAGTGGTGCCGCANNTG
CTGCAAATAGTGGTGCCGCNNCTGCTGCAAATAGAGGAAACAATGCCGCTGCAACTGGTG
CTGCAAATGGAAATAATGGCGNTGCAGCTGGAGCAAATAGTGGTGCCGCAACTGCTGCAA
ATAGTGGTGCTGCAAATAGTGGTGCTGCAACTGCTGCAAATAGTGGTGCTGCAGCTGGAG
CAAATAGTGGTGCTGCAACTGCTGCAAATAGTGGCGCTGCAACTGCTGCAAGTGGTGGAA
ATGGTGCAAGTGGTGCTGCAAACCCTGGTTCAATAGTAACTCCAAATGATCAAAATGTTT
CTCCATTATCGAACTCTGATGCTGCAGCAACCGCAGCATCAACTACAGGCAGAAACCCAA
GAAATCCAACAAGTAGAGCTCCAACGGTCACACCAACGCCAACCTTTT

---IVKVLLVVIVVLQLEXNSGAAXGAXXGAAXXANSGXAPGAXSGNXAAVXGAANXNNG
AAAGANSGAATAANSGAAXAANSGAAXAANRGNNAAATGAANGNNGXAAGANSGAATAAN
SGAANSGAATAANSGAAAGANSGAATAANSGAATAASGGNGASGAANPGSIVTPNDQNVS
PLSNSDAAATAASTTGRNPRNPTSRAPTVTPTPTF

Frame A:
---IVKVLLVVIVVLQLEXNSGAAXGAXXGAAXXANSGXAPGAXSGNXAAVXGAANXNNG
AAAGANSGAATAANSGAAXAANSGAAXAANRGNNAAATGAANGNNGXAAGANSGAATAAN
SGAANSGAATAANSGAAAGANSGAATAANSGAATAASGGNGASGAANPGSIVTPNDQNVS
PLSNSDAAATAASTTGRNPRNPTSRAPTVTPTPTF


Frame B:
---**rcyww**wccnwsxivvlqxexixalxlxqivvxhlvxivetxplxlvlqmxima
lqleqivvpqllqivvpxxlqivvpxllqieetmplqlvlqmeimaxqleqivvpqllqi
vvlqivvlqllqivvlqleqivvlqllqivalqllqvvemvqvvlqtlvq**lqmikmfl
hyrtlmlqqpqhqlqaetqeiqqvelqrshqrqpf


Frame C:
---segatggnsgaaiga**wccxwsx*xrcxxsk*wxctwcx*wkqxrcxwcckxk*wr
cswsk*wcrncck*wcrxcck*wcrxcck*rkqcrcnwcckwk*wrcswsk*wcrncck*
wcck*wccncck*wccswsk*wccncck*wrcncckwwkwckwcckpwfnsnsk*skcfs
iiel*ccsnrsinyrqkpkksnk*ssnghtnanl

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHB239 (SHB239Q) /CSM/SH/SHB2-B/SHB239Q.Seq.d/                        583   e-165
SHB145 (SHB145Q) /CSM/SH/SHB1-B/SHB145Q.Seq.d/                        551   e-156
SHA440 (SHA440Q) /CSM/SH/SHA4-B/SHA440Q.Seq.d/                        545   e-154
SLB441 (SLB441Q) /CSM/SL/SLB4-B/SLB441Q.Seq.d/                        543   e-153
CHI407 (CHI407Q) /CSM/CH/CHI4-A/CHI407Q.Seq.d/                        543   e-153
SHB246 (SHB246Q) /CSM/SH/SHB2-B/SHB246Q.Seq.d/                        539   e-152
CHO159 (CHO159Q) /CSM/CH/CHO1-C/CHO159Q.Seq.d/                        539   e-152
SHG517 (SHG517Q) /CSM/SH/SHG5-A/SHG517Q.Seq.d/                        537   e-152
SHG352 (SHG352Q) /CSM/SH/SHG3-C/SHG352Q.Seq.d/                        537   e-152
SHF136 (SHF136Q) /CSM/SH/SHF1-B/SHF136Q.Seq.d/                        537   e-152

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AY887028|AY887028.1 Ophiostoma novo-ulmi subsp. novo-ulmi isolate R66 MAT-1-2 gene, complete cds.    34   0.16   2
AY887027|AY887027.1 Ophiostoma novo-ulmi subsp. novo-ulmi isolate YU1 MAT-1-2 gene, complete cds.    34   0.16   2
AY887029|AY887029.1 Ophiostoma novo-ulmi subsp. novo-ulmi isolate V19 MAT-1-2 gene, complete cds.    34   0.16   2
DQ013872|DQ013872.1 Ophiostoma novo-ulmi isolate V1 mating type 3' flanking region genomic sequence.    34   0.17   2
AX770909|AX770909.1 Sequence 40 from Patent WO02094867.            48   0.23   1
BX571870|BX571870.1 Photorhabdus luminescens subsp. laumondii TTO1 complete genome;  segment 12/17.    48   0.23   1
CA972875|CA972875.1 AGENCOURT_10764708 Wellcome CRC pSK egg Xenopus laevis cDNA clone IMAGE:6324829 5', mRNA sequence.    46   0.90   1
BC082626|BC082626.1 Xenopus laevis hypothetical LOC494656, mRNA (cDNA clone MGC:80488 IMAGE:5156662), complete cds.    46   0.90   1
AC006539|AC006539.1 Homo sapiens chromosome 19, BAC 39498 (CIT-B-26L23), complete sequence.    46   0.90   1
CK575717|CK575717.1 IST_WI5_8840 AD-wrmcDNA library Caenorhabditis elegans cDNA 5' similar to T06E4.10, mRNA sequence.    34   3.0    3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54GV8) RecName: Full=Uncharacterized transmembrane protein DDB...    80   6e-14
FM992690_605(FM992690|pid:none) Candida dubliniensis CD36 chromo...    33   9.1

 psg: 0.98  gvh: 0.61  alm: 0.29  top: 0.33  tms: 0.07  mit: -0.07  mip: 0.15
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 28.0 %: endoplasmic reticulum
	 24.0 %: cytoplasmic
	 20.0 %: nuclear
	 12.0 %: mitochondrial
	  4.0 %: Golgi
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system
	  4.0 %: extracellular, including cell wall

>> prediction for SHB239 is end

>SHB239Z.Seq
NNNNNNNNNNAATAGTGAAGGTGCTACTGGTGGTAATAGTGGTGCTGCAATTGGAGCNTA
ATAGTGGTGCTGCAANTGGAGCANATAGNGGCGCTGCANCTGNAGCAAATAGTGGTGNTG
CACCTGGTGCANATAGTGGAAACAANGCCGCTGTANCTGGTGCTGCAAATGNAAATAATG
GCGCTGCAGCTGGAGCAAATAGTGGTGCCGCAACTGCTGCAAATAGTGGTGCCGCANNTG
CTGCAAATAGTGGTGCCGCNNCTGCTGCAAATAGAGGAAACAATGCCGCTGCAACTGGTG
CTGCAAATGGAAATAATGGCGNTGCAGCTGGAGCAAATAGTGGTGCCGCAACTGCTGCAA
ATAGTGGTGCTGCAAATAGTGGTGCTGCAACTGCTGCAAATAGTGGTGCTGCAGCTGGAG
CAAATAGTGGTGCTGCAACTGCTGCAAATAGTGGCGCTGCAACTGCTGCAAGTGGTGGAA
ATGGTGCAAGTGGTGCTGCAAACCCTGGTTCAATAGTAACTCCAAATGATCAAAATGTTT
CTCCATTATCGAACTCTGATGCTGCAGCAACCGCAGCATCAACTACAGGCAGAAACCCAA
GAAATCCAACAAGTAGAGCTCCAACGGTCACACCAACGCCAACCTTTT