>SHA814 (SHA814Q) /CSM/SH/SHA8-A/SHA814Q.Seq.d/
XXXXXXXXXXTCTACAAGAATATGGTGTTTGCAATGACACAATTTTGGTTTGGTATTTAC
AATTCCTTCTCTGCTCAAACAATGTTTGATTCTTGGTCCATTTCAATTTTCAATGTAGTT
TTCACTGGTCTTCCAATTATTGTTTGTGCTATCTTTGATCAAGATGTCTCTGCTGAATCA
TCACAAAAATATCCTCAACTATATGCAAGTGGTCAAAAAGATAGTGAATTCAATTTACGT
GTACTTTGGGTTTGGATCGTTGAAGCTTGGATTCATTCAGTGGTTATTTTCTTTGGTGTT
TATGGTCTCTACAGTCATGGTAGTACTTTATTGGAATCTGGTGACACTTTGGACCTTTGG
GCAATGGGTCAAAATATTTTCATTCTCGTGGTTATAACCGTAAACTTTAAGTTGGCATTT
GAAACTCGTTATTGGACTTGGATTACTCATTTCTCAATTTGGGCTTCCATTTTAATTTGG
TTCGCTTGGGTAGCAGTTTTAGCTGCAATTCCAGGTATTGGTTCAACTTCAAGTGGTGAT
ATCTATTATGTTGCCTATAAAATATTTGCAAGTCCATCATTCTGGTTATCAATAGCTGTG
CTACCAACCATTTGTTTGGCACCCGACGTCATTTACAAATACATCCAAAGAGATGTTAAA
CT

---YKNMVFAMTQFWFGIYNSFSAQTMFDSWSISIFNVVFTGLPIIVCAIFDQDVSAESS
QKYPQLYASGQKDSEFNLRVLWVWIVEAWIHSVVIFFGVYGLYSHGSTLLESGDTLDLWA
MGQNIFILVVITVNFKLAFETRYWTWITHFSIWASILIWFAWVAVLAAIPGIGSTSSGDI
YYVAYKIFASPSFWLSIAVLPTICLAPDVIYKYIQRDVK

Frame A:
---lqeygvcndtilvwylqfllcsnnv*flvhfnfqcsfhwssnyclcyl*srclc*ii
tkisstickwskr**iqftctlgldr*sldsfsgyflwclwslqsw*yfigiw*hfgplg
ngskyfhsrgynrkl*vgi*nslldldysflnlgfhfnlvrlgssfscnsrywfnfkw*y
llccl*nicksiilvinscatnhlfgtrrhlqihpkrc*t


Frame B:
---YKNMVFAMTQFWFGIYNSFSAQTMFDSWSISIFNVVFTGLPIIVCAIFDQDVSAESS
QKYPQLYASGQKDSEFNLRVLWVWIVEAWIHSVVIFFGVYGLYSHGSTLLESGDTLDLWA
MGQNIFILVVITVNFKLAFETRYWTWITHFSIWASILIWFAWVAVLAAIPGIGSTSSGDI
YYVAYKIFASPSFWLSIAVLPTICLAPDVIYKYIQRDVK


Frame C:
---triwclq*hnfglvftipsllkqclilgpfqfsm*fslvfqllfvlslikmsllnhh
knilnymqvvkkivnsiyvyfgfgslklgfiqwlfslvfmvstvmvvlywnlvtlwtfgq
wvkifsfswl*p*tlswhlklviglgllisqfglpf*fgslg*qf*lqfqvlvqlqvvis
imlpikylqvhhsgyq*lcyqpfvwhptsftntskemln

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHA814 (SHA814Q) /CSM/SH/SHA8-A/SHA814Q.Seq.d/                       1292   0.0
VHD203 (VHD203Q) /CSM/VH/VHD2-A/VHD203Q.Seq.d/                       1291   0.0
AHJ122 (AHJ122Q) /CSM/AH/AHJ1-A/AHJ122Q.Seq.d/                       1285   0.0
AHE265 (AHE265Q) /CSM/AH/AHE2-C/AHE265Q.Seq.d/                       1283   0.0
CHF824 (CHF824Q) /CSM/CH/CHF8-A/CHF824Q.Seq.d/                       1279   0.0
VHO641 (VHO641Q) /CSM/VH/VHO6-B/VHO641Q.Seq.d/                       1275   0.0
AHF195 (AHF195Q) /CSM/AH/AHF1-D/AHF195Q.Seq.d/                       1275   0.0
AHH240 (AHH240Q) /CSM/AH/AHH2-B/AHH240Q.Seq.d/                       1273   0.0
SHB172 (SHB172Q) /CSM/SH/SHB1-C/SHB172Q.Seq.d/                       1271   0.0
AHR168 (AHR168Q) /CSM/AH/AHR1-C/AHR168Q.Seq.d/                       1269   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AW450802|AW450802.1 UI-H-BI3-alf-c-08-0-UI.s1 NCI_CGAP_Sub5 Homo sapiens cDNA cloneIMAGE:2736399 3', mRNA sequence.    46   0.92   1
BZ680444|BZ680444.1 PUBAJ51TD ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa010I06, DNA sequence.    40   1.7    2
BZ673572|BZ673572.1 PUBAI51TD ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa010I05, DNA sequence.    40   1.7    2
CG149832|CG149832.1 PUJEW49TD ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa0652J01, genomic survey sequence.    40   2.1    2
CC636320|CC636320.1 OGUIG08TV ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0446B15, genomic survey sequence.    40   2.4    2
AC102772|AC102772.2 Mus musculus clone RP23-195E5, WORKING DRAFT SEQUENCE, 14 unordered pieces.    44   3.6    1
CR220170|CR220170.1 Forward strand read from insert in 5'HPRT insertion targeting and chromosome engineering clone MHPN355o20.    44   3.6    1
CR028932|CR028932.1 Forward strand read from insert in 5'HPRT insertion targeting and chromosome engineering clone MHPN313j15.    44   3.6    1
AG419904|AG419904.1 Mus musculus molossinus DNA, clone:MSMg01-290L03.TJ, genomic survey sequence.    44   3.6    1
BH580447|BH580447.1 BOHKP53TR BOHK Brassica oleracea genomic clone BOHKP53, DNA sequence.    44   3.6    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR380953_263(CR380953|pid:none) Candida glabrata strain CBS138 c...   164   2e-39
(Q29449) RecName: Full=Probable phospholipid-transporting ATPase...   159   9e-38
BC109318_1(BC109318|pid:none) Homo sapiens ATPase, aminophosphol...   157   3e-37
AC084010_1(AC084010|pid:none) Homo sapiens BAC clone RP11-49F1 f...   157   3e-37
BC094235_1(BC094235|pid:none) Mus musculus ATPase, aminophosphol...   156   4e-37
AK220560_1(AK220560|pid:none) Mus musculus mRNA for mKIAA4233 pr...   156   4e-37
(P70704) RecName: Full=Probable phospholipid-transporting ATPase...   156   4e-37
(P39524) RecName: Full=Probable phospholipid-transporting ATPase...   156   6e-37
(O94296) RecName: Full=Probable phospholipid-transporting ATPase...   155   1e-36
CR382131_1440(CR382131|pid:none) Yarrowia lipolytica strain CLIB...   155   1e-36

 psg: 0.91  gvh: 0.58  alm: 0.23  top: 0.47  tms: 0.33  mit: 0.31  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 36.0 %: endoplasmic reticulum
	 24.0 %: plasma membrane
	 20.0 %: mitochondrial
	  8.0 %: extracellular, including cell wall
	  4.0 %: Golgi
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for SHA814 is end

>SHA814Z.Seq
NNNNNNNNNNTCTACAAGAATATGGTGTTTGCAATGACACAATTTTGGTTTGGTATTTAC
AATTCCTTCTCTGCTCAAACAATGTTTGATTCTTGGTCCATTTCAATTTTCAATGTAGTT
TTCACTGGTCTTCCAATTATTGTTTGTGCTATCTTTGATCAAGATGTCTCTGCTGAATCA
TCACAAAAATATCCTCAACTATATGCAAGTGGTCAAAAAGATAGTGAATTCAATTTACGT
GTACTTTGGGTTTGGATCGTTGAAGCTTGGATTCATTCAGTGGTTATTTTCTTTGGTGTT
TATGGTCTCTACAGTCATGGTAGTACTTTATTGGAATCTGGTGACACTTTGGACCTTTGG
GCAATGGGTCAAAATATTTTCATTCTCGTGGTTATAACCGTAAACTTTAAGTTGGCATTT
GAAACTCGTTATTGGACTTGGATTACTCATTTCTCAATTTGGGCTTCCATTTTAATTTGG
TTCGCTTGGGTAGCAGTTTTAGCTGCAATTCCAGGTATTGGTTCAACTTCAAGTGGTGAT
ATCTATTATGTTGCCTATAAAATATTTGCAAGTCCATCATTCTGGTTATCAATAGCTGTG
CTACCAACCATTTGTTTGGCACCCGACGTCATTTACAAATACATCCAAAGAGATGTTAAA
CT