>SHA353 (SHA353Q) /CSM/SH/SHA3-C/SHA353Q.Seq.d/
CAATATAATCCATTAATATTAAATTAATTTCATTTTATTGCATGTAATATAATAATAAAT
AAAATAAAATAAAATAAAATAAAATAAAATAAAAATTTAAATAAAAAATAAAAAGAATAA
AGAAAAATAAAACTCACAACACACAAATATTAAAAAAAACTATACTTATAAAAAAAAAAT
AAAAAATAAAAAATAAAAAAATAACCCACACACTCGAACTAATAATAAACAATAAACAAA
CACACACACACATACATACACACACCAATAAACTAAATATATAGTAATAATAATAATAAT
AAATGGATCAATTAATCCCAGTTATTAATAAACTTCAAGATGTATTTAATACATTAGGAT
CANACCCATTGGATTTACCACAAATCGTTGTTGTTGGTAGTCAATCTTCAGGTAAAAGTA
GTGTACTTGAAAATATXXXXXXXXXXTTAATAAAGGTCCACAAAATATGCCTCCAAATCA
ATNTAAACCAAGTTCAATCCCACAAAATGGTCCAACCAATAATAATAATAATACCAATAA
TAATAATAGACAAGATCATCAACAAGGTTCTTTCTTTTCATCTTTTTTCAGAGCTTCACC
TGATCCATCTTTAGGTCAATATGGTGGTGCTAATAATAGTAATAATTCAAATAATCCAAC
ATCACCAATTAATTCAAGTAGTAATAGCGGTAATAATTATAATACTTTTGGTGGTCAACA
ATCATCATCTTCATCATCACAACAATTACAACAATCATCACAATCACAATATAAAACTAG
TTATAATAATAATAATAATAGTAGCAGCAATAATAGTAGTTATAATCGTTATCAAGATGA
TTTCTATGGTAGAGGTGATAAATTAAATCAAGTACCATCAATTATTAAAGCACCAGATGA
TTTAACAAGTAAAGAGAAATTTGAAACTGAATTAATTCGTGAACTTTTAATTTCCTATTT
TAATATCGTTAAAAAGAATGTTAAGGATTCAGTTCCAAAATCAATTATGCATTTCTTGGT
CAATCAATCAAAAGAACACATTCAAAATGAATTGGTTGCAGCCCTCTACAAAGAGGAATT
GTTTGATGAATTATTAGAGGAATCACCACAAATCTCTAGTAAGAGAAAATCTTGTAAAGC
TATGATCGAAATTTTAAGAAAAGCAAATGAAATTATTAAGAAATTAGAGATTTTAGAAAT
TAAAATATATTTAAATAAAATTTTATTACATTTATANA

i*siniklisfycm*ynnk*nkik*nkik*kfk*kikrikknkthntqilkktilikkk*
kiknkkithtleliinnkqththihthtnklni*******MDQLIPVINKLQDVFNTLGS
XPLDLPQIVVVGSQSSGKSSVLEN---

---NKGPQNMPPNQXKPSSIPQNGPTNNNNNTNNNNRQDHQQGSFFSSFFRASPDPSLGQ
YGGANNSNNSNNPTSPINSSSNSGNNYNTFGGQQSSSSSSQQLQQSSQSQYKTSYNNNNN
SSSNNSSYNRYQDDFYGRGDKLNQVPSIIKAPDDLTSKEKFETELIRELLISYFNIVKKN
VKDSVPKSIMHFLVNQSKEHIQNELVAALYKEELFDELLEESPQISSKRKSCKAMIEILR
KANEIIKKLEILEIKIYLNKILLHLX

Frame A:
qynpliln*fhfiacniiinkik*nkik*nknlnkk*ke*rkikltthky*kklyl*kkn
kk*kikk*pthsn***tinkhthtyihtpin*iysnnnnnkwin*sqllinfkmylih*d
xthwiyhkslllvvnlqvkvvylki---

---likvhkiclqinxnqvqshkmvqpiiiiipiiiidkiinkvlsfhlfselhlihl*v
nmvvliiviiqiiqhhqliqvviaviiiillvvnnhhlhhhnnynnhhnhniklviiiii
ivaaiivviivikmismvevin*ikyhqllkhqmi*qvkrnlkln*fvnf*fpilislkr
mlriqfqnqlciswsinqkntfkmnwlqpstkrnclmny*rnhhkslvrenlvkl*skf*
ekqmkllrn*rf*klkyi*ikfyyiyx

Frame B:
niih*y*infillhvi***ik*nkik*nkiki*iknkknkek*nsqhtnikknytykkki
knkk*knnphtrtnnkq*tnththtythq*tkyiviiiiingsinpsy**tsrci*yiri
xpigfttnrccw*sifr*k*ct*ky---

---**rstkyasksx*tkfnptkwsnq****yq****trsstrfflfiffqsft*sifrs
iwwc*****fk*snitn*fk***r**l*yfwwstiiifiittittiititi*n*l*****
**qq***l*slsr*flw*r**iksstiny*str*fnk*rei*n*ins*tfnflf*yr*ke
c*gfsskinyaflgqsikrthsk*igcsplqrgiv**iirgittnl**ekil*sydrnfk
ksk*ny*eirdfrn*nifk*nfitfi

Frame C:
i*siniklisfycm*ynnk*nkik*nkik*kfk*kikrikknkthntqilkktilikkk*
kiknkkithtleliinnkqththihthtnklni*******MDQLIPVINKLQDVFNTLGS
XPLDLPQIVVVGSQSSGKSSVLEN---

---NKGPQNMPPNQXKPSSIPQNGPTNNNNNTNNNNRQDHQQGSFFSSFFRASPDPSLGQ
YGGANNSNNSNNPTSPINSSSNSGNNYNTFGGQQSSSSSSQQLQQSSQSQYKTSYNNNNN
SSSNNSSYNRYQDDFYGRGDKLNQVPSIIKAPDDLTSKEKFETELIRELLISYFNIVKKN
VKDSVPKSIMHFLVNQSKEHIQNELVAALYKEELFDELLEESPQISSKRKSCKAMIEILR
KANEIIKKLEILEIKIYLNKILLHLX

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHF258 (SHF258Q) /CSM/SH/SHF2-C/SHF258Q.Seq.d/                        813   0.0
SHA353 (SHA353Q) /CSM/SH/SHA3-C/SHA353Q.Seq.d/                        813   0.0
AHR224 (AHR224Q) /CSM/AH/AHR2-A/AHR224Q.Seq.d/                        813   0.0
AHM439 (AHM439Q) /CSM/AH/AHM4-B/AHM439Q.Seq.d/                        813   0.0
AHB143 (AHB143Q) /CSM/AH/AHB1-B/AHB143Q.Seq.d/                        813   0.0
VSJ846 (VSJ846Q) /CSM/VS/VSJ8-B/VSJ846Q.Seq.d/                        807   0.0
SHC828 (SHC828Q) /CSM/SH/SHC8-B/SHC828Q.Seq.d/                        807   0.0
SHC669 (SHC669Q) /CSM/SH/SHC6-C/SHC669Q.Seq.d/                        807   0.0
SHC586 (SHC586Q) /CSM/SH/SHC5-D/SHC586Q.Seq.d/                        807   0.0
AHP582 (AHP582Q) /CSM/AH/AHP5-D/AHP582Q.Seq.d/                        807   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X99669|X99669.1 Dictyostelium discoideum mRNA for dynamin homologue.   700   0.0    5
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4, complete sequence.    42   0.001  7
AC005308|AC005308.8 Plasmodium falciparum chromosome 12 clone 3D7, *** SEQUENCING IN PROGRESS ***, 1 ordered pieces.    32   0.010  11
BH133329|BH133329.1 ENTNP69TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    38   0.023  2
BH146339|BH146339.1 ENTQE88TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    38   0.023  2
BH135206|BH135206.1 ENTNS79TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    38   0.023  2
AZ540674|AZ540674.1 ENTET30TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    38   0.023  2
AZ539280|AZ539280.1 ENTDB94TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    38   0.023  2
BH132090|BH132090.1 ENTNI60TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    38   0.023  2
BV501318|BV501318.1 S222P61799FE10.T0 Karlien Pan troglodytes verus STS genomic, sequence tagged site.    52   0.029  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q94464) RecName: Full=Dynamin-A;  &X99669_1(X99669|pid:none)         304   4e-81
AP007175_671(AP007175|pid:none) Aspergillus oryzae RIB40 genomic...    99   3e-19
CP000496_423(CP000496|pid:none) Pichia stipitis CBS 6054 chromos...    96   2e-18
Z98763_14(Z98763|pid:none) S.pombe chromosome I cosmid c9G1.           96   3e-18
CR382126_555(CR382126|pid:none) Kluyveromyces lactis strain NRRL...    93   2e-17
CR382135_509(CR382135|pid:none) Debaryomyces hansenii strain CBS...    92   4e-17
AM270061_74(AM270061|pid:none) Aspergillus niger contig An03c020...    92   4e-17
AE016814_13(AE016814|pid:none) Ashbya gossypii (= Eremothecium g...    91   8e-17
DQ812520_4(DQ812520|pid:none) Spironucleus barkhanus isolate Sp3...    91   8e-17
AF012833_1(AF012833|pid:none) Arabidopsis thaliana ADL2 mRNA, co...    90   2e-16

 psg: 0.70  gvh: 0.43  alm: 0.44  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 24.0 %: nuclear
	 12.0 %: cytoskeletal
	 12.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for SHA353 is cyt

>SHA353F.Seq
CAATATAATCCATTAATATTAAATTAATTTCATTTTATTGCATGTAATATAATAATAAAT
AAAATAAAATAAAATAAAATAAAATAAAATAAAAATTTAAATAAAAAATAAAAAGAATAA
AGAAAAATAAAACTCACAACACACAAATATTAAAAAAAACTATACTTATAAAAAAAAAAT
AAAAAATAAAAAATAAAAAAATAACCCACACACTCGAACTAATAATAAACAATAAACAAA
CACACACACACATACATACACACACCAATAAACTAAATATATAGTAATAATAATAATAAT
AAATGGATCAATTAATCCCAGTTATTAATAAACTTCAAGATGTATTTAATACATTAGGAT
CANACCCATTGGATTTACCACAAATCGTTGTTGTTGGTAGTCAATCTTCAGGTAAAAGTA
GTGTACTTGAAAATATNNNNNNNNNN

>SHA353Z.Seq
NNNNNNNNNNTTAATAAAGGTCCACAAAATATGCCTCCAAATCAATNTAAACCAAGTTCA
ATCCCACAAAATGGTCCAACCAATAATAATAATAATACCAATAATAATAATAGACAAGAT
CATCAACAAGGTTCTTTCTTTTCATCTTTTTTCAGAGCTTCACCTGATCCATCTTTAGGT
CAATATGGTGGTGCTAATAATAGTAATAATTCAAATAATCCAACATCACCAATTAATTCA
AGTAGTAATAGCGGTAATAATTATAATACTTTTGGTGGTCAACAATCATCATCTTCATCA
TCACAACAATTACAACAATCATCACAATCACAATATAAAACTAGTTATAATAATAATAAT
AATAGTAGCAGCAATAATAGTAGTTATAATCGTTATCAAGATGATTTCTATGGTAGAGGT
GATAAATTAAATCAAGTACCATCAATTATTAAAGCACCAGATGATTTAACAAGTAAAGAG
AAATTTGAAACTGAATTAATTCGTGAACTTTTAATTTCCTATTTTAATATCGTTAAAAAG
AATGTTAAGGATTCAGTTCCAAAATCAATTATGCATTTCTTGGTCAATCAATCAAAAGAA
CACATTCAAAATGAATTGGTTGCAGCCCTCTACAAAGAGGAATTGTTTGATGAATTATTA
GAGGAATCACCACAAATCTCTAGTAAGAGAAAATCTTGTAAAGCTATGATCGAAATTTTA
AGAAAAGCAAATGAAATTATTAAGAAATTAGAGATTTTAGAAATTAAAATATATTTAAAT
AAAATTTTATTACATTTATANA

>SHA353P.Seq
CAATATAATCCATTAATATTAAATTAATTTCATTTTATTGCATGTAATATAATAATAAAT
AAAATAAAATAAAATAAAATAAAATAAAATAAAAATTTAAATAAAAAATAAAAAGAATAA
AGAAAAATAAAACTCACAACACACAAATATTAAAAAAAACTATACTTATAAAAAAAAAAT
AAAAAATAAAAAATAAAAAAATAACCCACACACTCGAACTAATAATAAACAATAAACAAA
CACACACACACATACATACACACACCAATAAACTAAATATATAGTAATAATAATAATAAT
AAATGGATCAATTAATCCCAGTTATTAATAAACTTCAAGATGTATTTAATACATTAGGAT
CANACCCATTGGATTTACCACAAATCGTTGTTGTTGGTAGTCAATCTTCAGGTAAAAGTA
GTGTACTTGAAAATAT----------TTAATAAAGGTCCACAAAATATGCCTCCAAATCA
ATNTAAACCAAGTTCAATCCCACAAAATGGTCCAACCAATAATAATAATAATACCAATAA
TAATAATAGACAAGATCATCAACAAGGTTCTTTCTTTTCATCTTTTTTCAGAGCTTCACC
TGATCCATCTTTAGGTCAATATGGTGGTGCTAATAATAGTAATAATTCAAATAATCCAAC
ATCACCAATTAATTCAAGTAGTAATAGCGGTAATAATTATAATACTTTTGGTGGTCAACA
ATCATCATCTTCATCATCACAACAATTACAACAATCATCACAATCACAATATAAAACTAG
TTATAATAATAATAATAATAGTAGCAGCAATAATAGTAGTTATAATCGTTATCAAGATGA
TTTCTATGGTAGAGGTGATAAATTAAATCAAGTACCATCAATTATTAAAGCACCAGATGA
TTTAACAAGTAAAGAGAAATTTGAAACTGAATTAATTCGTGAACTTTTAATTTCCTATTT
TAATATCGTTAAAAAGAATGTTAAGGATTCAGTTCCAAAATCAATTATGCATTTCTTGGT
CAATCAATCAAAAGAACACATTCAAAATGAATTGGTTGCAGCCCTCTACAAAGAGGAATT
GTTTGATGAATTATTAGAGGAATCACCACAAATCTCTAGTAAGAGAAAATCTTGTAAAGC
TATGATCGAAATTTTAAGAAAAGCAAATGAAATTATTAAGAAATTAGAGATTTTAGAAAT
TAAAATATATTTAAATAAAATTTTATTACATTTATANA