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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
AFI691
Library AF
(Link to library)
Clone ID AFI691
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U16463-1
Original site URL
Representative seq. ID AFI691P
(Link to Original site)
Representative DNA sequence 
>AFI691 (AFI691Q) /CSM/AF/AFI6-D/AFI691Q.Seq.d/
GGGAAAAATAAATAAATAAATAAATAAATATGTCAGCTCCAGTTTTAACCACCAGTAGTG
GTTCACCAATTGATAACAATTTAAACTCAATGACCGCAGGTGTTAATGGTCCAATTTTAA
TTCAAGATTTCACTTTAATTGATAAACTTGCTCATTTCGATCGTGAACGTATCCCAGAAC
GTGTTGTACATGCTAAAGGTGCTGGTGCCCATGGTTATTTCGAAGTTACCTCAAGTGATG
TACCAAAATGGTGTAAAGCTAAATTCTTAAATAAAGTTGGTAAGAGAACACCAATCTTCA
CCCGTTTCTCTACTGTTGGTGGTGAAAAAGGTTCATCCGATTCTGAAAGAGATCCAAGAG
GTTTCGCTGTCAAATTTTATACTGAAGAAGGTAACTTTGATATGGTCGGTAATAATACTC
CAGTTTTCTTTATTCGTGATCCATCAAAATTCCCAGATTTCATTCATACACAAAAACGTA
ATCCACAAACAAATTGTAAAGATCCAAATATGTTTTGGGATTTTTTAGGTCAAACACCAG
AATCAACACATCAAGTATCAATTTTATTCTCTGATAGAGGTACACCAAAATCATATCGTC
ATATGCATGGNTTCTCATCACATACCTTAAAAXXXXXXXXXXAAGATGCCTTAAAGTATC
GTTTCAATCCATTCGATGTAACAAAGATTTGGTCACACAAAGACTATCCATTAATTCAAA
TTGGTCGTATGGTTTTGAATCGTAATCCAGAGAATTACTTTGCTGAAGTTGAACAAGCTG
CCTTCTCACCATCCCACATGGTTCCAGGTATTGAACCATCACCAGATAAGATGTTACAAG
GTCGTCTCTTCTCTTATCCAGATACTCATCGTCATCGTTTAGGTGTAAACTATCAACAAA
TCCCAGTCAATTGTCCATTCGCCGTAAAGGGTGGTGTTAAAAACTACCAACGTGATGGTT
TCATGGCTGTCAATGGTAATGGTGGTAAAGGTCCAAACTATCAACCAAACTCTTTCGGTG
GTCCAGAGCCACATCCAGAATTTGCTCAACATAAATTTGACGTCTCTGGTTTCGCTGCTC
GTCAACCATACAATCATCCAAATGACGACTTTGTTCAACCAGGTGATTTATATAGACTCA
TGTCTGAAGATGCCAAATCTCGTTTCGTCTCTAATTTAGTCGGTCACATGTCCGGTGTCA
CCATCAAAGAAATTCAAGTTCGTGCCGTTTCAAACTTTTACAAGGCTGACAAAGATTTAG
GTGCTCGTTTATGTAAGGGTCTTGGTATTGATGTTAANATGTCATCAAATTCGCTGCTAG
ATCAAACTGTAAATCAATA
sequence update 2001. 6. 2
Translated Amino Acid sequence 
ek*ink*INMSAPVLTTSSGSPIDNNLNSMTAGVNGPILIQDFTLIDKLAHFDRERIPER
VVHAKGAGAHGYFEVTSSDVPKWCKAKFLNKVGKRTPIFTRFSTVGGEKGSSDSERDPRG
FAVKFYTEEGNFDMVGNNTPVFFIRDPSKFPDFIHTQKRNPQTNCKDPNMFWDFLGQTPE
STHQVSILFSDRGTPKSYRHMHGFSSHTLK---

---DALKYRFNPFDVTKIWSHKDYPLIQIGRMVLNRNPENYFAEVEQAAFSPSHMVPGIE
PSPDKMLQGRLFSYPDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMAVNGNGGKGP
NYQPNSFGGPEPHPEFAQHKFDVSGFAARQPYNHPNDDFVQPGDLYRLMSEDAKSRFVSN
LVGHMSGVTIKEIQVRAVSNFYKADKDLGARLCKGLGIDVXMSSNSLLDQTVNQ
Translated Amino Acid sequence (All Frames) 
Frame A:
gknk*ink*icqlqf*ppvvvhqliti*tq*pqvlmvqf*fkisl*linllisivnvsqn
vlymlkvlvpmvisklpqvmyqngvklns*iklvrehqsspvslllvvkkvhpilkeiqe
vslsnfilkkvtliwsviilqfslfvihqnsqisfihknvihkqivkiqicfgif*vkhq
nqhikyqfyslievhqnhivicmxshhip*---

---kmp*sivsihsm*qrfghtktih*fklvvwf*iviqritllklnklpshhptwfqvl
nhhqircykvvssliqiliviv*v*tinksqsivhsp*rvvlkttnvmvswlsmvmvvkv
qtinqtlsvvqshiqnllninltslvsllvnhtiiqmttlfnqviyidsclkmpnlvssl
i*svtcpvspskkfkfvpfqtftrltki*vlvyvrvlvlmlxchqirc*ikl*in

Frame B:
gkink*inkyvsssfnhq*wftn**qfklndrrc*wsnfnsrfhfn**tcsfrs*typrt
cctc*rcwcpwlfrsylk*ctkmv*s*ilk*sw*entnlhpflycww*krfirf*krskr
frcqily*rr*l*ygr**yssflys*sikiprfhsytkt*stnkl*rskyvlgffrsntr
intssinfil**rytkiissyawxlitylk---

---rclkvsfqsircnkdlvtqrlsinsnwsygfes*srellc*s*tsclltiphgsry*
titr*dvtrsslllsryssssfrcklstnpsqlsirrkgwc*klpt*wfhgcqw*ww*rs
klstklfrwsratsricst*i*rlwfrcsstiqssk*rlcstr*fi*thv*rcqisfrl*
fsrshvrchhqrnssscrfkllqg*qrfrcsfm*gswy*c*xvikfaarsncksi

Frame C:
ek*ink*INMSAPVLTTSSGSPIDNNLNSMTAGVNGPILIQDFTLIDKLAHFDRERIPER
VVHAKGAGAHGYFEVTSSDVPKWCKAKFLNKVGKRTPIFTRFSTVGGEKGSSDSERDPRG
FAVKFYTEEGNFDMVGNNTPVFFIRDPSKFPDFIHTQKRNPQTNCKDPNMFWDFLGQTPE
STHQVSILFSDRGTPKSYRHMHGFSSHTLK---

---DALKYRFNPFDVTKIWSHKDYPLIQIGRMVLNRNPENYFAEVEQAAFSPSHMVPGIE
PSPDKMLQGRLFSYPDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMAVNGNGGKGP
NYQPNSFGGPEPHPEFAQHKFDVSGFAARQPYNHPNDDFVQPGDLYRLMSEDAKSRFVSN
LVGHMSGVTIKEIQVRAVSNFYKADKDLGARLCKGLGIDVXMSSNSLLDQTVNQ
Homology vs CSM-cDNA 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AFI691 (AFI691Q) /CSM/AF/AFI6-D/AFI691Q.Seq.d/                       2524   0.0
AFE708 (AFE708Q) /CSM/AF/AFE7-A/AFE708Q.Seq.d/                       1376   0.0
CFI634 (CFI634Q) /CSM/CF/CFI6-B/CFI634Q.Seq.d/                       1374   0.0
CFI568 (CFI568Q) /CSM/CF/CFI5-C/CFI568Q.Seq.d/                       1362   0.0
CFA669 (CFA669Q) /CSM/CF/CFA6-C/CFA669Q.Seq.d/                       1362   0.0
AFE574 (AFE574Q) /CSM/AF/AFE5-D/AFE574Q.Seq.d/                       1362   0.0
AFE294 (AFE294Q) /CSM/AF/AFE2-D/AFE294Q.Seq.d/                       1362   0.0
AFE230 (AFE230Q) /CSM/AF/AFE2-B/AFE230Q.Seq.d/                       1362   0.0
AFN393 (AFN393Q) /CSM/AF/AFN3-D/AFN393Q.Seq.d/                       1358   0.0
VFH727 (VFH727Q) /CSM/VF/VFH7-B/VFH727Q.Seq.d/                       1354   0.0
own update 2009. 4. 3
Homology vs DNA 

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AF090443|AF090443.1 Dictyostelium discoideum catalase (cat) mRNA, complete cds.  1298   0.0    2
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.  1298   0.0    12
AB064338|AB064338.1 Candida boidinii CTA1 gene for peroxisomal catalase, complete cds.   111   1e-64  7
E65314|E65314.1 Novel catalase, gene of said catalase and composition containing  said  catalase, and process for preparing catalase using the genetic engineering  technology.    86   9e-33  4
AP004595|AP004595.1 Oceanobacillus iheyensis HTE831 genomic DNA, section 3/13.    72   2e-31  9
AX536932|AX536932.1 Sequence 533 from Patent WO02064766.          101   7e-29  3
AR375090|AR375090.1 Sequence 96 from patent US 6605709.            76   7e-28  3
AJ400965|AJ400965.1 Proteus mirabilis ORF1 DNA, katA gene and menE gene, strain PR.    76   4e-27  3
AJ400964|AJ400964.1 Proteus mirabilis ORF1 DNA, katA gene and menE gene, wild type.    76   4e-27  3
AB006327|AB006327.1 Candida albicans mRNA for catalase, complete cds.    94   2e-26  3
dna update 2004. 9.23
Homology vs Protein 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP000300_481(CP000300|pid:none) Methanococcoides burtonii DSM 62...   517   e-145
AY378080_1(AY378080|pid:none) Tetrahymena thermophila putative c...   504   e-141
(P26901) RecName: Full=Vegetative catalase;          EC=1.11.1.6...   486   e-136
AF090443_1(AF090443|pid:none) Dictyostelium discoideum catalase ...   459   e-127
(O93662) RecName: Full=Catalase;          EC=1.11.1.6;  &AJ00593...   431   e-119
BC086479_1(BC086479|pid:none) Xenopus laevis hypothetical LOC495...   425   e-117
BC099349_1(BC099349|pid:none) Xenopus laevis hypothetical LOC495...   423   e-117
T27177(T27177;T27171;S49452)catalase (EC 1.11.1.6) Y54G11A.5b - ...   420   e-116
CP000560_826(CP000560|pid:none) Bacillus amyloliquefaciens FZB42...   420   e-116
Y14065_2(Y14065|pid:none) Caenorhabditis elegans cat1 gene and c...   409   e-113
protein update 2009. 4.23
PSORT 

 psg: 0.89  gvh: 0.57  alm: 0.44  top: 0.40  tms: 0.00  mit: 0.31  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 28.0 %: cytoplasmic
	 28.0 %: nuclear
	 20.0 %: extracellular, including cell wall
	 16.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar

>> prediction for AFI691 is cyt
5' end seq. ID AFI691F
5' end seq. 
>AFI691F.Seq
GGGAAAAATAAATAAATAAATAAATAAATATGTCAGCTCCAGTTTTAACCACCAGTAGTG
GTTCACCAATTGATAACAATTTAAACTCAATGACCGCAGGTGTTAATGGTCCAATTTTAA
TTCAAGATTTCACTTTAATTGATAAACTTGCTCATTTCGATCGTGAACGTATCCCAGAAC
GTGTTGTACATGCTAAAGGTGCTGGTGCCCATGGTTATTTCGAAGTTACCTCAAGTGATG
TACCAAAATGGTGTAAAGCTAAATTCTTAAATAAAGTTGGTAAGAGAACACCAATCTTCA
CCCGTTTCTCTACTGTTGGTGGTGAAAAAGGTTCATCCGATTCTGAAAGAGATCCAAGAG
GTTTCGCTGTCAAATTTTATACTGAAGAAGGTAACTTTGATATGGTCGGTAATAATACTC
CAGTTTTCTTTATTCGTGATCCATCAAAATTCCCAGATTTCATTCATACACAAAAACGTA
ATCCACAAACAAATTGTAAAGATCCAAATATGTTTTGGGATTTTTTAGGTCAAACACCAG
AATCAACACATCAAGTATCAATTTTATTCTCTGATAGAGGTACACCAAAATCATATCGTC
ATATGCATGGNTTCTCATCACATACCTTAAAA----------
Length of 5' end seq. 632
3' end seq. ID AFI691Z
3' end seq. 
>AFI691Z.Seq
----------AAGATGCCTTAAAGTATCGTTTCAATCCATTCGATGTAACAAAGATTTGG
TCACACAAAGACTATCCATTAATTCAAATTGGTCGTATGGTTTTGAATCGTAATCCAGAG
AATTACTTTGCTGAAGTTGAACAAGCTGCCTTCTCACCATCCCACATGGTTCCAGGTATT
GAACCATCACCAGATAAGATGTTACAAGGTCGTCTCTTCTCTTATCCAGATACTCATCGT
CATCGTTTAGGTGTAAACTATCAACAAATCCCAGTCAATTGTCCATTCGCCGTAAAGGGT
GGTGTTAAAAACTACCAACGTGATGGTTTCATGGCTGTCAATGGTAATGGTGGTAAAGGT
CCAAACTATCAACCAAACTCTTTCGGTGGTCCAGAGCCACATCCAGAATTTGCTCAACAT
AAATTTGACGTCTCTGGTTTCGCTGCTCGTCAACCATACAATCATCCAAATGACGACTTT
GTTCAACCAGGTGATTTATATAGACTCATGTCTGAAGATGCCAAATCTCGTTTCGTCTCT
AATTTAGTCGGTCACATGTCCGGTGTCACCATCAAAGAAATTCAAGTTCGTGCCGTTTCA
AACTTTTACAAGGCTGACAAAGATTTAGGTGCTCGTTTATGTAAGGGTCTTGGTATTGAT
GTTAANATGTCATCAAATTCGCTGCTAGATCAAACTGTAAATCAATA
Length of 3' end seq. 697
Connected seq. ID AFI691P
Connected seq. 
>AFI691P.Seq
GGGAAAAATAAATAAATAAATAAATAAATATGTCAGCTCCAGTTTTAACCACCAGTAGTG
GTTCACCAATTGATAACAATTTAAACTCAATGACCGCAGGTGTTAATGGTCCAATTTTAA
TTCAAGATTTCACTTTAATTGATAAACTTGCTCATTTCGATCGTGAACGTATCCCAGAAC
GTGTTGTACATGCTAAAGGTGCTGGTGCCCATGGTTATTTCGAAGTTACCTCAAGTGATG
TACCAAAATGGTGTAAAGCTAAATTCTTAAATAAAGTTGGTAAGAGAACACCAATCTTCA
CCCGTTTCTCTACTGTTGGTGGTGAAAAAGGTTCATCCGATTCTGAAAGAGATCCAAGAG
GTTTCGCTGTCAAATTTTATACTGAAGAAGGTAACTTTGATATGGTCGGTAATAATACTC
CAGTTTTCTTTATTCGTGATCCATCAAAATTCCCAGATTTCATTCATACACAAAAACGTA
ATCCACAAACAAATTGTAAAGATCCAAATATGTTTTGGGATTTTTTAGGTCAAACACCAG
AATCAACACATCAAGTATCAATTTTATTCTCTGATAGAGGTACACCAAAATCATATCGTC
ATATGCATGGNTTCTCATCACATACCTTAAAA----------AAGATGCCTTAAAGTATC
GTTTCAATCCATTCGATGTAACAAAGATTTGGTCACACAAAGACTATCCATTAATTCAAA
TTGGTCGTATGGTTTTGAATCGTAATCCAGAGAATTACTTTGCTGAAGTTGAACAAGCTG
CCTTCTCACCATCCCACATGGTTCCAGGTATTGAACCATCACCAGATAAGATGTTACAAG
GTCGTCTCTTCTCTTATCCAGATACTCATCGTCATCGTTTAGGTGTAAACTATCAACAAA
TCCCAGTCAATTGTCCATTCGCCGTAAAGGGTGGTGTTAAAAACTACCAACGTGATGGTT
TCATGGCTGTCAATGGTAATGGTGGTAAAGGTCCAAACTATCAACCAAACTCTTTCGGTG
GTCCAGAGCCACATCCAGAATTTGCTCAACATAAATTTGACGTCTCTGGTTTCGCTGCTC
GTCAACCATACAATCATCCAAATGACGACTTTGTTCAACCAGGTGATTTATATAGACTCA
TGTCTGAAGATGCCAAATCTCGTTTCGTCTCTAATTTAGTCGGTCACATGTCCGGTGTCA
CCATCAAAGAAATTCAAGTTCGTGCCGTTTCAAACTTTTACAAGGCTGACAAAGATTTAG
GTGCTCGTTTATGTAAGGGTCTTGGTATTGATGTTAANATGTCATCAAATTCGCTGCTAG
ATCAAACTGTAAATCAATA
Length of connected seq. 1329
Full length Seq ID -
Full length Seq. -
Length of full length seq. -