>SFK717 (SFK717Q) /CSM/SF/SFK7-A/SFK717Q.Seq.d/
TCATTATTAAAATTTTAGAAAAGCACAAAAATGTTAAATAAACTAATACTATTATTAATT
CTATCAAGTTGTTTGGTACTATCAGTTAAAAGTGAAGTTAATGTTGATTGCTCCCTCGTT
AGATGTGCCCAACCAATATGTAAACCTCATTATAGATTAAACATGACCGATTCTTGTTGT
GGTCGTTGTGAACCTTGTACCGATGTTGCATGTACTCTTCAAGTCAAATATTGTCAAGAT
GGTGAAGTTCCAACCGGTTGTTGTCCATGTACTCTCCCACCAACCAAACCAGATTGCTCC
CTTGTTAAATGTGCTAGACCAGTATGTAAACCATATTATAGATTAAACATGACCGATTCT
TGTTGTGGTCGTTGTGAACCATGTACAGGTGTCGCATGTACTCTTCAAATCAAATATTGT
AAAGATGGTGAAGTTCCAACTGGTTGTTGTCCATGTACACCTCAACCAACTAAAAAACCA
GATTGTTCAAAAGTTCCATGTCCAAAGATTTTAAAATATTGCCAAGGAAGGTGAACTTCC
AACTGGTTGTTGTCCATGTACACCTCAACCAACTAAAAAACCAGATTGTTCAAGAGTTCC
ATGTCCAAAGATTTTGAAATACTGTAAAGGAAGGTGAACTTCCAACTGGGTTGNTGTCCA
TGTACACCTCAACCAACTAAAAAACCAGATTGTTCXXXXXXXXXX

sllkf*KSTKMLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCC
GRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDS
CCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQGR*ts
nwllsmytstn*ktrlfkssmskdfeil*rkvnfqlgxcpctpqptkkpdc---

Frame A:
sllkf*KSTKMLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCC
GRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDS
CCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQGR*ts
nwllsmytstn*ktrlfkssmskdfeil*rkvnfqlgxcpctpqptkkpdc---


Frame B:
hy*nfrkaqkc*in*yyy*fyqvvwyyqlkvklmliapsldvpnqyvnliid*t*pilvv
vvvnlvpmlhvlfksnivkmvkfqpvvvhvlshqpnqiapllnvldqyvnhiid*t*pil
vvvvvnhvqvshvlfksnivkmvkfqlvvvhvhlnqlknqivqkfhvqrf*niakegelp
tgccpctpqptkkpdcsrvpcpkilkyckgr*tsnwvxvhvhlnqlknqiv---


Frame C:
iikilekhknvk*tntiinsiklfgtis*k*s*c*llpr*mcptnm*tsl*ikhdrfllw
sl*tlyrccmysssqilsrw*ssnrllsmysptnqtrllpc*mc*tsm*til*ikhdrfl
lwsl*tmyrcrmyssnqil*rw*ssnwllsmytstn*ktrlfkssmskdfkilprkvnfq
lvvvhvhlnqlknqivqefhvqrf*ntvkegelptglxsmytstn*ktrl---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFK717 (SFK717Q) /CSM/SF/SFK7-A/SFK717Q.Seq.d/                       1372   0.0
AFI796 (AFI796Q) /CSM/AF/AFI7-D/AFI796Q.Seq.d/                       1316   0.0
AHE311 (AHE311Q) /CSM/AH/AHE3-A/AHE311Q.Seq.d/                       1312   0.0
FC-AB20 (FC-AB20Q) /CSM/FC/FC-AB/FC-AB20Q.Seq.d/                     1245   0.0
CFB787 (CFB787Q) /CSM/CF/CFB7-D/CFB787Q.Seq.d/                       1061   0.0
SLE532 (SLE532Q) /CSM/SL/SLE5-B/SLE532Q.Seq.d/                        841   0.0
SSF516 (SSF516Q) /CSM/SS/SSF5-A/SSF516Q.Seq.d/                        745   0.0
SLK756 (SLK756Q) /CSM/SL/SLK7-C/SLK756Q.Seq.d/                        569   e-161
SSJ589 (SSJ589Q) /CSM/SS/SSJ5-D/SSJ589Q.Seq.d/                        359   4e-98
VSJ477 (VSJ477Q) /CSM/VS/VSJ4-D/VSJ477Q.Seq.d/                         38   0.18

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ390321) Dictyostelium discoideum cDNA clone:dds22b05, 5' ...  1372   0.0    1
(AC116960) Dictyostelium discoideum chromosome 2 map complem...  1043   0.0    4
(BJ332424) Dictyostelium discoideum cDNA clone:dda39f03, 5' ...  1031   0.0    4
(BJ327055) Dictyostelium discoideum cDNA clone:dda18p23, 5' ...  1025   0.0    3
(AU284234) Dictyostelium discoideum gamete cDNA clone:FC-AB2...   963   0.0    4
(M11012) Slime mold (D.discoideum) prestalk D11 gene, comple...   886   0.0    9
(BJ350196) Dictyostelium discoideum cDNA clone:dda39f03, 3' ...   837   0.0    4
(BJ373775) Dictyostelium discoideum cDNA clone:ddc4n21, 3' e...   759   0.0    5
(AU061519) Dictyostelium discoideum slug cDNA, clone SLE532.      577   0.0    4
(AU034811) Dictyostelium discoideum slug cDNA, clone SLE532.      525   0.0    4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPDOD1(A23754)prestalk D11 protein precursor - slime mold (Dicty...   223   2e-58
(P04275) RecName: Full=von Willebrand factor;          Short=vWF...    39   0.12
M10321_1(M10321|pid:none) Human von Willebrand factor mRNA, 3' e...    39   0.12
AK297600_1(AK297600|pid:none) Homo sapiens cDNA FLJ59036 complet...    39   0.12
AC116956_29(AC116956|pid:none) Dictyostelium discoideum chromoso...    38   0.26
AK003994_1(AK003994|pid:none) Mus musculus 18-day embryo whole b...    36   0.97
AE014297_479(AE014297|pid:none) Drosophila melanogaster chromoso...    35   1.7
AB450036_1(AB450036|pid:none) Cratoxylum ligustrinum chloroplast...    35   2.8
AM746676_8749(AM746676|pid:none) Sorangium cellulosum 'So ce 56'...    35   2.8
CP001330_169(CP001330|pid:none) Micromonas sp. RCC299 chromosome...    35   2.8

 psg: 0.97  gvh: 0.83  alm: 0.50  top: 0.27  tms: 0.00  mit: 0.38  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 64.0 %: extracellular, including cell wall
	 12.0 %: vacuolar
	 12.0 %: endoplasmic reticulum
	  8.0 %: mitochondrial
	  4.0 %: cytoplasmic

>> prediction for SFK717 is exc

>SFK717F.Seq
TCATTATTAAAATTTTAGAAAAGCACAAAAATGTTAAATAAACTAATACTATTATTAATT
CTATCAAGTTGTTTGGTACTATCAGTTAAAAGTGAAGTTAATGTTGATTGCTCCCTCGTT
AGATGTGCCCAACCAATATGTAAACCTCATTATAGATTAAACATGACCGATTCTTGTTGT
GGTCGTTGTGAACCTTGTACCGATGTTGCATGTACTCTTCAAGTCAAATATTGTCAAGAT
GGTGAAGTTCCAACCGGTTGTTGTCCATGTACTCTCCCACCAACCAAACCAGATTGCTCC
CTTGTTAAATGTGCTAGACCAGTATGTAAACCATATTATAGATTAAACATGACCGATTCT
TGTTGTGGTCGTTGTGAACCATGTACAGGTGTCGCATGTACTCTTCAAATCAAATATTGT
AAAGATGGTGAAGTTCCAACTGGTTGTTGTCCATGTACACCTCAACCAACTAAAAAACCA
GATTGTTCAAAAGTTCCATGTCCAAAGATTTTAAAATATTGCCAAGGAAGGTGAACTTCC
AACTGGTTGTTGTCCATGTACACCTCAACCAACTAAAAAACCAGATTGTTCAAGAGTTCC
ATGTCCAAAGATTTTGAAATACTGTAAAGGAAGGTGAACTTCCAACTGGGTTGNTGTCCA
TGTACACCTCAACCAACTAAAAAACCAGATTGTTC----------