SFJ731
Library SF
(Link to library)
Clone ID SFJ731
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U13873-1
Original site URL
Representative seq. ID SFJ731P
(Link to Original site)
Representative DNA sequence
>SFJ731 (SFJ731Q) /CSM/SF/SFJ7-B/SFJ731Q.Seq.d/
ATTTTTAATATTTTAATAATTATAATTTTAAAAAATGAGTATTGAATCAATTAAAGCTAG
AGAAATTTTGGATAGTAGAGGTAATCCAACATTAGAAGTTGAAGTATGGACAAGTGAAGG
AATGTTTTCAGCCAAAGTACCAAGTGGAGCATCAACTGGTATTCATGAAGCATTTGAATT
AAGAGATGGTGATAAAAGTCGTTATTTTGGATATGGTGTTTTGAATGCAATTGTTAATGT
AAATAATTTAATATCACCAACATTGAAAGGTATGAGAGTTGATAATCAAAAAGCAATAGA
TGATAAAATGATTGAATTGGATGGTACAAAGAATAAATCAAAACTTGGGTCCAATGCAAT
CGTTGGTGTATCAATGGCAGTGGCAAGAGCAGCCGCTTCTATTAAAGGTGTGCCCTTGTA
CCGTTACATTTCACAATTGGCTGGAAATAGTAATATTCGTTTACCAGTACCATGTTTTAA
TGTTATTAATGGTGGAAAACATGCAGGTAATAGACTACCATTTCAAGAGTTTATGCTAGT
ACCCATTGGTGCACCAAAATTTAAAGAAGCATTGCGTTATGGTTCAGAAGTCTACCATTC
ACTCAAAGAGATXXXXXXXXXXGATGCTATCAATCATTCGGGCTATCAAGATGTTATTAA
AATTGGTATTGATTCTGCTGCTTCAGAATTTTGGAATCCAAAGACTTCAAAATATGATAT
GGATTTCAAGAATATAGGATCCTCACATTTGAAGTCTAGTTTAAATAGTGGTGAGCAATT
AATGTCTAGATATTTAGAGATTTTAAAAAAGTATCCAATTGCATTCTTTGAAGATCCATT
TGGTGAAGATGATTGGGAAAATCATGGTAAAATTACAGCTGCAATTGGTAATAAAATTCA
AATCATTGGTGATGATTTACTTTGTACAAATCCAGAAAGAATTAAAAAAGCAATTTCTGA
GAAAACTGTAAATTCATTATTATTGAAAATAAATCAAATCGGTACACTAACTGAAACTAT
TGAAGCTGCAAAACTTGCAAAAGAAGCTGGTTGGGGTTGTTTAGTTAGTCATCGTTCAGG
TGAAACTGATGATCATTTCATTGCTGATCTTGTAGTTGGTCTTGGTACTGGTGAAATAAA
ATCTGGTGCACCTTGTAGATTTGAAAGATTATCAAAATATAATAGATTAATGAAAATTGA
AGAAGAACTTGAAAAACTTCATAGATCAAATGGTAATTCATTTGAGTATGCTGGNAAGAG
TTTTATCATTTTTAATAAAAATTAAAAAAAAA
sequence update 2001. 6. 1
Translated Amino Acid sequence
flif**l*f*KMSIESIKAREILDSRGNPTLEVEVWTSEGMFSAKVPSGASTGIHEAFEL
RDGDKSRYFGYGVLNAIVNVNNLISPTLKGMRVDNQKAIDDKMIELDGTKNKSKLGSNAI
VGVSMAVARAAASIKGVPLYRYISQLAGNSNIRLPVPCFNVINGGKHAGNRLPFQEFMLV
PIGAPKFKEALRYGSEVYHSLKE---

---DAINHSGYQDVIKIGIDSAASEFWNPKTSKYDMDFKNIGSSHLKSSLNSGEQLMSRY
LEILKKYPIAFFEDPFGEDDWENHGKITAAIGNKIQIIGDDLLCTNPERIKKAISEKTVN
SLLLKINQIGTLTETIEAAKLAKEAGWGCLVSHRSGETDDHFIADLVVGLGTGEIKSGAP
CRFERLSKYNRLMKIEEELEKLHRSNGNSFEYAGKSFIIFNKN*kk


Translated Amino Acid sequence (All Frames)
Frame A:
ifniliiiilkney*in*s*rnfg**r*snirs*smdk*rnvfsqstkwsinwys*si*i
krw**kslfwiwcfecnc*ck*fnitnieryes**sksnr**nd*igwyke*iktwvqcn
rwcingsgkssrfy*rcalvplhftigwk**ysftstmf*cy*wwktcr**ttisrvyas
thwctki*rsialwfrslpftqrd---

---DAINHSGYQDVIKIGIDSAASEFWNPKTSKYDMDFKNIGSSHLKSSLNSGEQLMSRY
LEILKKYPIAFFEDPFGEDDWENHGKITAAIGNKIQIIGDDLLCTNPERIKKAISEKTVN
SLLLKINQIGTLTETIEAAKLAKEAGWGCLVSHRSGETDDHFIADLVVGLGTGEIKSGAP
CRFERLSKYNRLMKIEEELEKLHRSNGNSFEYAGKSFIIFNKN*kk

Frame B:
flif**l*f*KMSIESIKAREILDSRGNPTLEVEVWTSEGMFSAKVPSGASTGIHEAFEL
RDGDKSRYFGYGVLNAIVNVNNLISPTLKGMRVDNQKAIDDKMIELDGTKNKSKLGSNAI
VGVSMAVARAAASIKGVPLYRYISQLAGNSNIRLPVPCFNVINGGKHAGNRLPFQEFMLV
PIGAPKFKEALRYGSEVYHSLKE---

---mlsiiraikmllklvlilllqnfgiqrlqnmiwisri*dphi*slv*ivvsn*cldi
*rf*ksiqlhslkihlvkmigkimvklqlqlvikfkslvmiyfvqiqkelkkqflrkl*i
hyy*k*iksvh*lkllklqnlqkklvgvv*lvivqvklmiisllil*lvlvlvk*nlvhl
vdlkdyqniid**klkknlknfidqmvihlsmlxrvlsflikikkk

Frame C:
f*yfnnynfkk*vlnqlklekfwiveviqh*klkygqvkecfqpkyqvehqlvfmkhln*
emvikvvildmvf*mqllm*ii*yhqh*kv*eliikkq*mik*lnwmvqrinqnlgpmqs
lvyqwqwqeqplllkvcpctvtfhnwleivifvyqyhvlmllmvenmqvidyhfkslc*y
plvhqnlkkhcvmvqkstihskr---

---cyqsfglsrcy*nwy*fccfrileskdfki*ygfqeyriltfev*fk*w*ainv*if
rdfkkvsncil*rsiw*r*lgksw*nyscnw**nsnhw**ftlyksrkn*ksnf*enckf
iiienksnrytn*ny*scktckrswlglfs*ssfr*n**sfhc*scswswyw*nkiwctl
*i*kiiki**inen*rrt*kts*ikw*fi*vcwxefyhf**klkk

Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

SFJ731 (SFJ731Q) /CSM/SF/SFJ7-B/SFJ731Q.Seq.d/ 2478 0.0
CHB680 (CHB680Q) /CSM/CH/CHB6-D/CHB680Q.Seq.d/ 1289 0.0
CHC316 (CHC316Q) /CSM/CH/CHC3-A/CHC316Q.Seq.d/ 1283 0.0
CHB459 (CHB459Q) /CSM/CH/CHB4-C/CHB459Q.Seq.d/ 1271 0.0
CHC156 (CHC156Q) /CSM/CH/CHC1-C/CHC156Q.Seq.d/ 1265 0.0
CFH624 (CFH624Q) /CSM/CF/CFH6-A/CFH624Q.Seq.d/ 1265 0.0
CFK240 (CFK240Q) /CSM/CF/CFK2-B/CFK240Q.Seq.d/ 1261 0.0
CFJ407 (CFJ407Q) /CSM/CF/CFJ4-A/CFJ407Q.Seq.d/ 1251 0.0
CFG491 (CFG491Q) /CSM/CF/CFG4-D/CFG491Q.Seq.d/ 1223 0.0
CHD848 (CHD848Q) /CSM/CH/CHD8-B/CHD848Q.Seq.d/ 1221 0.0

own update 2004.12.25
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

U09736|U09736.1 Entamoeba histolytica HM1:IMSS enolase (enl-1) mRNA, complete cds. 56 1e-26 5
BD183626|BD183626.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 58 7e-19 6
BD183625|BD183625.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 58 7e-19 6
U00152|U00152.1 Plasmodium falciparum enolase gene complete cds. 58 7e-19 6
AB026051|AB026051.1 Plasmodium falciparum mRNA for enolase, complete cds. 58 7e-19 6
BM162118|BM162118.1 EST564641 PyBS Plasmodium yoelii yoelii cDNA clone PYCKN41 5' end, mRNA sequence. 70 5e-18 3
BM165201|BM165201.1 EST567724 PyBS Plasmodium yoelii yoelii cDNA clone PYCMI87 5' end, mRNA sequence. 70 6e-18 3
BM164058|BM164058.1 EST566581 PyBS Plasmodium yoelii yoelii cDNA clone PYCLP21 5' end, mRNA sequence. 70 7e-16 2
BM166362|BM166362.1 EST568885 PyBS Plasmodium yoelii yoelii cDNA clone PYCNG69 5' end, mRNA sequence. 70 1e-15 2
Y17298|Y17298.1 Cunninghamella elegans mRNA for enolase. 58 4e-15 4
dna update 2004. 1. 6
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

DQ497988_1(DQ497988|pid:none) Polypterus senegalus enolase B mRN... 439 e-122
(Q27727) RecName: Full=Enolase; EC=4.2.1.11; AltName: F... 437 e-121
AK290525_1(AK290525|pid:none) Homo sapiens cDNA FLJ77877 complet... 435 e-120
BC054169_1(BC054169|pid:none) Xenopus laevis enolase 1, alpha, m... 435 e-120
(P09104) RecName: Full=Gamma-enolase; EC=4.2.1.11; AltN... 435 e-120
(P17183) RecName: Full=Gamma-enolase; EC=4.2.1.11; AltN... 434 e-120
(P07323) RecName: Full=Gamma-enolase; EC=4.2.1.11; AltN... 434 e-120
AM910990_161(AM910990|pid:none) Plasmodium knowlesi strain H chr... 434 e-120
(Q9U615) RecName: Full=Enolase; EC=4.2.1.11; AltName: F... 434 e-120
JC1039(JC1039)phosphopyruvate hydratase (EC 4.2.1.11) - rat 433 e-120
protein update 2009. 5.27
PSORT

psg: 0.56 gvh: 0.44 alm: 0.38 top: 0.53 tms: 0.00 mit: 0.29 mip: 0.00
nuc: 0.04 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

60.0 %: cytoplasmic
24.0 %: nuclear
12.0 %: mitochondrial
4.0 %: peroxisomal

>> prediction for SFJ731 is cyt

5' end seq. ID SFJ731F
5' end seq.
>SFJ731F.Seq
ATTTTTAATATTTTAATAATTATAATTTTAAAAAATGAGTATTGAATCAATTAAAGCTAG
AGAAATTTTGGATAGTAGAGGTAATCCAACATTAGAAGTTGAAGTATGGACAAGTGAAGG
AATGTTTTCAGCCAAAGTACCAAGTGGAGCATCAACTGGTATTCATGAAGCATTTGAATT
AAGAGATGGTGATAAAAGTCGTTATTTTGGATATGGTGTTTTGAATGCAATTGTTAATGT
AAATAATTTAATATCACCAACATTGAAAGGTATGAGAGTTGATAATCAAAAAGCAATAGA
TGATAAAATGATTGAATTGGATGGTACAAAGAATAAATCAAAACTTGGGTCCAATGCAAT
CGTTGGTGTATCAATGGCAGTGGCAAGAGCAGCCGCTTCTATTAAAGGTGTGCCCTTGTA
CCGTTACATTTCACAATTGGCTGGAAATAGTAATATTCGTTTACCAGTACCATGTTTTAA
TGTTATTAATGGTGGAAAACATGCAGGTAATAGACTACCATTTCAAGAGTTTATGCTAGT
ACCCATTGGTGCACCAAAATTTAAAGAAGCATTGCGTTATGGTTCAGAAGTCTACCATTC
ACTCAAAGAGAT----------
Length of 5' end seq. 612
3' end seq. ID SFJ731Z
3' end seq.
>SFJ731Z.Seq
----------GATGCTATCAATCATTCGGGCTATCAAGATGTTATTAAAATTGGTATTGA
TTCTGCTGCTTCAGAATTTTGGAATCCAAAGACTTCAAAATATGATATGGATTTCAAGAA
TATAGGATCCTCACATTTGAAGTCTAGTTTAAATAGTGGTGAGCAATTAATGTCTAGATA
TTTAGAGATTTTAAAAAAGTATCCAATTGCATTCTTTGAAGATCCATTTGGTGAAGATGA
TTGGGAAAATCATGGTAAAATTACAGCTGCAATTGGTAATAAAATTCAAATCATTGGTGA
TGATTTACTTTGTACAAATCCAGAAAGAATTAAAAAAGCAATTTCTGAGAAAACTGTAAA
TTCATTATTATTGAAAATAAATCAAATCGGTACACTAACTGAAACTATTGAAGCTGCAAA
ACTTGCAAAAGAAGCTGGTTGGGGTTGTTTAGTTAGTCATCGTTCAGGTGAAACTGATGA
TCATTTCATTGCTGATCTTGTAGTTGGTCTTGGTACTGGTGAAATAAAATCTGGTGCACC
TTGTAGATTTGAAAGATTATCAAAATATAATAGATTAATGAAAATTGAAGAAGAACTTGA
AAAACTTCATAGATCAAATGGTAATTCATTTGAGTATGCTGGNAAGAGTTTTATCATTTT
TAATAAAAATTAAAAAAAAA
Length of 3' end seq. 670
Connected seq. ID SFJ731P
Connected seq.
>SFJ731P.Seq
ATTTTTAATATTTTAATAATTATAATTTTAAAAAATGAGTATTGAATCAATTAAAGCTAG
AGAAATTTTGGATAGTAGAGGTAATCCAACATTAGAAGTTGAAGTATGGACAAGTGAAGG
AATGTTTTCAGCCAAAGTACCAAGTGGAGCATCAACTGGTATTCATGAAGCATTTGAATT
AAGAGATGGTGATAAAAGTCGTTATTTTGGATATGGTGTTTTGAATGCAATTGTTAATGT
AAATAATTTAATATCACCAACATTGAAAGGTATGAGAGTTGATAATCAAAAAGCAATAGA
TGATAAAATGATTGAATTGGATGGTACAAAGAATAAATCAAAACTTGGGTCCAATGCAAT
CGTTGGTGTATCAATGGCAGTGGCAAGAGCAGCCGCTTCTATTAAAGGTGTGCCCTTGTA
CCGTTACATTTCACAATTGGCTGGAAATAGTAATATTCGTTTACCAGTACCATGTTTTAA
TGTTATTAATGGTGGAAAACATGCAGGTAATAGACTACCATTTCAAGAGTTTATGCTAGT
ACCCATTGGTGCACCAAAATTTAAAGAAGCATTGCGTTATGGTTCAGAAGTCTACCATTC
ACTCAAAGAGAT----------GATGCTATCAATCATTCGGGCTATCAAGATGTTATTAA
AATTGGTATTGATTCTGCTGCTTCAGAATTTTGGAATCCAAAGACTTCAAAATATGATAT
GGATTTCAAGAATATAGGATCCTCACATTTGAAGTCTAGTTTAAATAGTGGTGAGCAATT
AATGTCTAGATATTTAGAGATTTTAAAAAAGTATCCAATTGCATTCTTTGAAGATCCATT
TGGTGAAGATGATTGGGAAAATCATGGTAAAATTACAGCTGCAATTGGTAATAAAATTCA
AATCATTGGTGATGATTTACTTTGTACAAATCCAGAAAGAATTAAAAAAGCAATTTCTGA
GAAAACTGTAAATTCATTATTATTGAAAATAAATCAAATCGGTACACTAACTGAAACTAT
TGAAGCTGCAAAACTTGCAAAAGAAGCTGGTTGGGGTTGTTTAGTTAGTCATCGTTCAGG
TGAAACTGATGATCATTTCATTGCTGATCTTGTAGTTGGTCTTGGTACTGGTGAAATAAA
ATCTGGTGCACCTTGTAGATTTGAAAGATTATCAAAATATAATAGATTAATGAAAATTGA
AGAAGAACTTGAAAAACTTCATAGATCAAATGGTAATTCATTTGAGTATGCTGGNAAGAG
TTTTATCATTTTTAATAAAAATTAAAAAAAAA
Length of connected seq. 1282
Full length Seq ID -
Full length Seq. -
Length of full length seq. -