>SFJ553 (SFJ553Q) /CSM/SF/SFJ5-C/SFJ553Q.Seq.d/
XXXXXXXXXXAATTATTTTATAAAATTGTTGAAAGAGGTTCATTTACAGAAAAAGGTGCA
CGTAATGTTGTAAGACAAGTATGTGCTGGTGTTGAATATCTCCATTCACAAGGTATTGCT
CATAGAGATTTGAAACCAGAGAATTTATTATGTAATGGTGAAGGTNAAGATATGACAATC
AAAANTGCAGATTTTGGTCTTAGTAAAATATTTGGAACTGGTNAAGCATTGNAAACAAGT
TGTGGTACACCANATTATGTTGCACCAGAAGTTTTAACTGGTGGTTCATATGATAATGCA
GTCGATATGTGGTCAATTGGTGTCATTACCTATATTTTATTATGTGGTTTCCCACCATTC
CTATGCTTCATCTCANCCACTTATTATTTGAAAAAATTTTAACCGCTGATTATGATTTCC
CAGAACCAGAATGGACTCATGTCTCTGAACATGCCAAAGCTTTCATNANAAACTTAATTG
TCAAAGATCCAGANCNACGTCATACTGCCAANCAATGTCTTGATGACCTTCGGCTCTCTG
GTAGTGATCAATCAATTGGTTCTGCTGCTGATCNCCACNCTCATTNCNCTGAAAAGATNA
AGNAATATAA

---LFYKIVERGSFTEKGARNVVRQVCAGVEYLHSQGIAHRDLKPENLLCNGEGXDMTIK
XADFGLSKIFGTGXALXTSCGTPXYVAPEVLTGGSYDNAVDMWSIGVITYILLCGFPPFL
CFISXTYYLKKF*plimisqnqnglmslnmpklsxxt*lskiqxxvilpxnvlmtfgslv
vinqlvlllixtlixlkrxxni

Frame A:
---iil*nc*krfiyrkrct*ccktsmcwc*ispftrycs*rfetrefim*w*rxrydnq
xcrfws**niwnwxsixnklwytxlcctrsfnwwfi**csryvvnwchylyfimwfptip
mlhlxhllfekiltadydfpepewthvsehakafxxnlivkdpxxrhtaxqclddlrlsg
sdqsigsaadxhxhxxekxkxy


Frame B:
---LFYKIVERGSFTEKGARNVVRQVCAGVEYLHSQGIAHRDLKPENLLCNGEGXDMTIK
XADFGLSKIFGTGXALXTSCGTPXYVAPEVLTGGSYDNAVDMWSIGVITYILLCGFPPFL
CFISXTYYLKKF*plimisqnqnglmslnmpklsxxt*lskiqxxvilpxnvlmtfgslv
vinqlvlllixtlixlkrxxni


Frame C:
---yfikllkevhlqkkvhvml*dkyvlvlnisihkvlliei*nqriyyvmvkvki*qsk
xqilvlvkylelvkhxkqvvvhximlhqkf*lvvhmimqsicgqlvslpifyyvvshhsy
assxplii*knfnr*l*fprtrmdscl*tcqsfhxklncqrsrxtsycqxms**psalw*
*sinwfcc*spxsxx*kdxxi*

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFJ553 (SFJ553Q) /CSM/SF/SFJ5-C/SFJ553Q.Seq.d/                       1088   0.0
SSI101 (SSI101Q) /CSM/SS/SSI1-A/SSI101Q.Seq.d/                       1019   0.0
SFK820 (SFK820Q) /CSM/SF/SFK8-A/SFK820Q.Seq.d/                       1015   0.0
AFL780 (AFL780Q) /CSM/AF/AFL7-D/AFL780Q.Seq.d/                        999   0.0
SSC643 (SSC643Q) /CSM/SS/SSC6-B/SSC643Q.Seq.d/                        961   0.0
CFB218 (CFB218Q) /CSM/CF/CFB2-A/CFB218Q.Seq.d/                        959   0.0
AFL836 (AFL836Q) /CSM/AF/AFL8-B/AFL836Q.Seq.d/                        955   0.0
VSF265 (VSF265Q) /CSM/VS/VSF2-C/VSF265Q.Seq.d/                        954   0.0
VFJ379 (VFJ379Q) /CSM/VF/VFJ3-D/VFJ379Q.Seq.d/                        954   0.0
SFH150 (SFH150Q) /CSM/SF/SFH1-C/SFH150Q.Seq.d/                        942   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.   664   0.0    3
M64176|M64176.1 D.discoideum myosin light chain kinase (MLCK) mRNA, complete cds.    80   1e-30  4
AB118103|AB118103.1 Entamoeba histolytica gene for hypothetical protein, complete cds, clone:Eh-2109.    52   4e-15  4
AZ667950|AZ667950.1 ENTFN88TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    52   6e-13  3
AZ545332|AZ545332.1 ENTGA35TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    52   5e-09  3
BH137166|BH137166.1 ENTNR83TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    52   4e-07  2
AZ672839|AZ672839.1 ENTIX25TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    52   6e-07  2
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 map 3622643-3879522 strain AX4, complete sequence.    50   8e-06  8
BP190282|BP190282.1 Dugesia japonica cDNA, clone: 04589_HH, expressed in the head.    60   4e-05  1
AZ930615|AZ930615.1 474.dhz56f04.s1 Saccharomyces unisporus NRRL Y-1556 Saccharomyces unisporus genomic clone 474.dhz56f04.s1, DNA sequence.    42   6e-05  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q869W6) RecName: Full=Probable calcium/calmodulin-dependent ser...   231   1e-92
AC116982_54(AC116982|pid:none) Dictyostelium discoideum chromoso...   156   5e-48
BC074183_1(BC074183|pid:none) Xenopus laevis MGC82022 protein, m...   141   3e-42
AB076903_1(AB076903|pid:none) Ciona intestinalis Ci-CaM-K mRNA f...   140   4e-42
BC110966_1(BC110966|pid:none) Xenopus laevis calcium/calmodulin-...   144   5e-42
BT045374_1(BT045374|pid:none) Salmo salar clone ssal-rgf-519-258...   143   6e-42
AY606040_1(AY606040|pid:none) Oncorhynchus mykiss calcium/calmod...   143   1e-41
BC041721_1(BC041721|pid:none) Xenopus laevis calcium/calmodulin-...   144   2e-41
(Q8IU85) RecName: Full=Calcium/calmodulin-dependent protein kina...   142   2e-41
(Q8BW96) RecName: Full=Calcium/calmodulin-dependent protein kina...   142   2e-41

 psg: 0.67  gvh: 0.33  alm: 0.26  top: 0.87  tms: 0.07  mit: 0.33  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.05  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 1.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 24.0 %: cytoplasmic
	 24.0 %: nuclear
	 12.0 %: mitochondrial
	 12.0 %: vesicles of secretory system
	  8.0 %: Golgi
	  8.0 %: endoplasmic reticulum
	  4.0 %: extracellular, including cell wall
	  4.0 %: cytoskeletal
	  4.0 %: plasma membrane

>> prediction for SFJ553 is cyt

>SFJ553Z.Seq
----------AATTATTTTATAAAATTGTTGAAAGAGGTTCATTTACAGAAAAAGGTGCA
CGTAATGTTGTAAGACAAGTATGTGCTGGTGTTGAATATCTCCATTCACAAGGTATTGCT
CATAGAGATTTGAAACCAGAGAATTTATTATGTAATGGTGAAGGTNAAGATATGACAATC
AAAANTGCAGATTTTGGTCTTAGTAAAATATTTGGAACTGGTNAAGCATTGNAAACAAGT
TGTGGTACACCANATTATGTTGCACCAGAAGTTTTAACTGGTGGTTCATATGATAATGCA
GTCGATATGTGGTCAATTGGTGTCATTACCTATATTTTATTATGTGGTTTCCCACCATTC
CTATGCTTCATCTCANCCACTTATTATTTGAAAAAATTTTAACCGCTGATTATGATTTCC
CAGAACCAGAATGGACTCATGTCTCTGAACATGCCAAAGCTTTCATNANAAACTTAATTG
TCAAAGATCCAGANCNACGTCATACTGCCAANCAATGTCTTGATGACCTTCGGCTCTCTG
GTAGTGATCAATCAATTGGTTCTGCTGCTGATCNCCACNCTCATTNCNCTGAAAAGATNA
AGNAATATAA