>SFJ449 (SFJ449Q) /CSM/SF/SFJ4-C/SFJ449Q.Seq.d/
XXXXXXXXXXATGAGAATGAAACTCTATGCTGACTCTTTAGCTCGTTACAGTAAATCACC
ATACATTTATCCATTATATGGTTTAGGTGAATTACCACAAGCATTTGCCCGTTTATCTGC
TATCTATGGTGGTACATATATGCTTAATAAACCAATTGAAAATATTGTTTTCGATGAAGA
AAAGAAAATTATTAAAGTTACATCTGAAGGTGAAACTGTAACATGTGATAAAATTGTTTG
TGATCCATCATATTTCCCAAATAAAGTTCAAAAGAAAGGTAAAATTATTCGTTCAATTTG
TATTTTGAATGGTCCAATTCCATCTGCTGATAAGAAATTTGAATCACTCCAAATCATTAT
CCCACAAAAACAAGTTAAACGTCAATCAGATATGTACGTTGGTGTTATGTCATCCGCTCA
TTGTGTCTGTCCAAAGGGTAAATACATTGCCATCGTTTCAGCCACTGTTGAAACCAATGA
ACCAGAGAAAGAATTAGCACCAGCTTACGCTTTATTAGGTCCAATTCAAGAGAAATTTGT
CTATATTTCTGATTTCATTGAACCAATTGCTGATGGTACTGCCGACAATGTTTTCATCTC
AAAATCATATGATGCTACCTCTCACTTTGAAACCACTTGTGAAGATGTCATGGATATGTA
CAAGAGAATCACTGGTAAAGATTTAGTTCTCACTGTTCATCCAAATATTCTTAAACAACA
AGAAGAAGCGGTAACCAGAACAAGAAGAAC

---RMKLYADSLARYSKSPYIYPLYGLGELPQAFARLSAIYGGTYMLNKPIENIVFDEEK
KIIKVTSEGETVTCDKIVCDPSYFPNKVQKKGKIIRSICILNGPIPSADKKFESLQIIIP
QKQVKRQSDMYVGVMSSAHCVCPKGKYIAIVSATVETNEPEKELAPAYALLGPIQEKFVY
ISDFIEPIADGTADNVFISKSYDATSHFETTCEDVMDMYKRITGKDLVLTVHPNILKQQE
EAVTRTRR

Frame A:
---*e*nsmltl*lvtvnhhtfihymv*vnyhkhlpvyllsmvvhiclinqlkilfsmkk
rkllklhlkvkl*hviklfvihhisqikfkrkvklfvqfvf*mvqfhllirnlnhsksls
hknklnvnqictlvlchplivsvqrvntlpsfqpllkpmnqrkn*hqltly*vqfkrnls
iflislnqllmvlptmfssqnhmmlpltlkplvkmswictreslvki*fslfiqiflnnk
kkr*peqee


Frame B:
---enetlc*lfsslq*itihlsiiwfr*ittsicpficylwwyiya**tn*kycfr*rk
eny*syi*r*ncnm**ncl*siifpk*ssker*nysfnlyfewsnsic**ei*itpnhyp
tkts*tsiryvrwcyvirslclskg*ihchrfshc*nq*treristslrfirsnsreicl
yf*fh*tnc*wycrqcfhlkii*cylsl*nhl*rchgyvqenhw*rfsshcsskys*ttr
rsgnqnkkn


Frame C:
---RMKLYADSLARYSKSPYIYPLYGLGELPQAFARLSAIYGGTYMLNKPIENIVFDEEK
KIIKVTSEGETVTCDKIVCDPSYFPNKVQKKGKIIRSICILNGPIPSADKKFESLQIIIP
QKQVKRQSDMYVGVMSSAHCVCPKGKYIAIVSATVETNEPEKELAPAYALLGPIQEKFVY
ISDFIEPIADGTADNVFISKSYDATSHFETTCEDVMDMYKRITGKDLVLTVHPNILKQQE
EAVTRTRR

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFJ449 (SFJ449Q) /CSM/SF/SFJ4-C/SFJ449Q.Seq.d/                       1467   0.0
AFN874 (AFN874Q) /CSM/AF/AFN8-D/AFN874Q.Seq.d/                       1453   0.0
AFD453 (AFD453Q) /CSM/AF/AFD4-C/AFD453Q.Seq.d/                       1451   0.0
SFD219 (SFD219Q) /CSM/SF/SFD2-A/SFD219Q.Seq.d/                       1445   0.0
AFE889 (AFE889Q) /CSM/AF/AFE8-D/AFE889Q.Seq.d/                       1425   0.0
CFC760 (CFC760Q) /CSM/CF/CFC7-C/CFC760Q.Seq.d/                       1419   0.0
SFI510 (SFI510Q) /CSM/SF/SFI5-A/SFI510Q.Seq.d/                       1403   0.0
CFH515 (CFH515Q) /CSM/CF/CFH5-A/CFH515Q.Seq.d/                       1403   0.0
SFJ795 (SFJ795Q) /CSM/SF/SFJ7-D/SFJ795Q.Seq.d/                       1400   0.0
SFL394 (SFL394Q) /CSM/SF/SFL3-D/SFL394Q.Seq.d/                       1398   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AL408803|AL408803.1 T3 end of clone AV0AA010G06 of library AV0AA from strain CBS 379 ofSaccharomyces exiguus.    54   1e-09  3
AJ005836|AJ005836.1 Cicer arietinum mRNA for GDP dissociation inhibitor (gdi).    38   2e-09  4
BG790353|BG790353.1 sae68c10.y1 Gm-c1064 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1064-3212 5' similar to TR:O65744 O65744 GDP DISSOCIATION INHIBITOR. ;, mRNA sequence.    62   3e-08  2
BE800797|BE800797.1 sq98c12.y1 Gm-c1049 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1049-1199 5' similar to TR:O65744 O65744 GDP DISSOCIATION INHIBITOR. ;, mRNA sequence.    62   4e-08  2
AW397479|AW397479.1 sg79d05.y1 Gm-c1007 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1007-2626 5' similar to TR:O65744 O65744 GDP DISSOCIATION INHIBITOR. ;, mRNA sequence.    62   4e-08  2
BU964562|BU964562.1 sas99a12.y1 Gm-c1036 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1036-12311 5' similar to TR:O65744 O65744 GDP DISSOCIATION INHIBITOR. ;, mRNA sequence.    62   4e-08  2
BI315670|BI315670.1 saf75f12.y1 Gm-c1078 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1078-2184 5' similar to TR:O65744 O65744 GDP DISSOCIATION INHIBITOR. ;, mRNA sequence.    62   1e-07  2
AI437629|AI437629.1 sa37e09.y1 Gm-c1004 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1004-1505 5' similar to TR:O24653 O24653 GDI2. ;, mRNA sequence.    62   1e-07  2
BZ296562|BZ296562.1 CG2922.f1 Candida glabrata Random Genomic Library Candida glabrata genomic clone CG2922, DNA sequence.    66   8e-07  1
AJ618983|AJ618983.1 Medicago truncatula gdi gene for GDP dissociation inhibitor.    40   2e-06  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF251042_1(AF251042|pid:none) Mus musculus rab GDP dissociation ...   281   1e-74
AY086920_1(AY086920|pid:none) Arabidopsis thaliana clone 29536 m...   281   2e-74
AC004005_24(AC004005|pid:none) Arabidopsis thaliana chromosome 2...   280   3e-74
BC095329_1(BC095329|pid:none) Danio rerio GDP dissociation inhib...   280   3e-74
AF130987_1(AF130987|pid:none) Rattus norvegicus RAB GDP dissocia...   280   3e-74
(O97555) RecName: Full=Rab GDP dissociation inhibitor alpha;    ...   280   3e-74
(P50398) RecName: Full=Rab GDP dissociation inhibitor alpha;    ...   280   3e-74
X74402_1(X74402|pid:none) R.norvegicus rab GDI alpha mRNA.            280   3e-74
EF676817_1(EF676817|pid:none) Picea sitchensis clone WS02753_I09...   279   6e-74
(P21856) RecName: Full=Rab GDP dissociation inhibitor alpha;    ...   279   6e-74

 psg: 0.68  gvh: 0.62  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.26  mip: 0.07
 nuc: 0.06  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: nuclear
	 32.0 %: cytoplasmic
	 20.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system

>> prediction for SFJ449 is nuc

>SFJ449Z.Seq
----------ATGAGAATGAAACTCTATGCTGACTCTTTAGCTCGTTACAGTAAATCACC
ATACATTTATCCATTATATGGTTTAGGTGAATTACCACAAGCATTTGCCCGTTTATCTGC
TATCTATGGTGGTACATATATGCTTAATAAACCAATTGAAAATATTGTTTTCGATGAAGA
AAAGAAAATTATTAAAGTTACATCTGAAGGTGAAACTGTAACATGTGATAAAATTGTTTG
TGATCCATCATATTTCCCAAATAAAGTTCAAAAGAAAGGTAAAATTATTCGTTCAATTTG
TATTTTGAATGGTCCAATTCCATCTGCTGATAAGAAATTTGAATCACTCCAAATCATTAT
CCCACAAAAACAAGTTAAACGTCAATCAGATATGTACGTTGGTGTTATGTCATCCGCTCA
TTGTGTCTGTCCAAAGGGTAAATACATTGCCATCGTTTCAGCCACTGTTGAAACCAATGA
ACCAGAGAAAGAATTAGCACCAGCTTACGCTTTATTAGGTCCAATTCAAGAGAAATTTGT
CTATATTTCTGATTTCATTGAACCAATTGCTGATGGTACTGCCGACAATGTTTTCATCTC
AAAATCATATGATGCTACCTCTCACTTTGAAACCACTTGTGAAGATGTCATGGATATGTA
CAAGAGAATCACTGGTAAAGATTTAGTTCTCACTGTTCATCCAAATATTCTTAAACAACA
AGAAGAAGCGGTAACCAGAACAAGAAGAAC