>SFJ269 (SFJ269Q) /CSM/SF/SFJ2-C/SFJ269Q.Seq.d/
XXXXXXXXXXTATTGTGTTGGGGTTGATGGCAAAAGTTAGAAATGGACCTTCGTTCAAGA
GANTTTGTCTCGTACTATCCAGCCATTGATAGCGGTATGAATTCAGGTTCCTATAAAGAA
TTCCATAATGATTTCTATCTTACTAAAGATGGTATGAAATGGTTCTGGGATGCATACACC
AACAGTCCAAAAGACACCAATGAAATCTACTGCTCTCCTTCCAAATGCAAAGAATCTGAT
GTCATGGGTTTCCCANAAACAATGATCATCAATGGTGAAGCTGATGTCCTCCGTGATGAA
GGTGAAAATTTCGNTAGACTATTACGTAAAGCNAATGTTCCAGTNACTCACCTAAGAATT
CAAGCAATGGTTCATGATTTCGTTGCTCTAANCTGTCTTGATCAATCAAGAAGCATGTAG
AGTTGCNATGGANTCCTCAATTGATTTCTTAAATAAATCTCATGATCCAAATGCAACTAA
ACCAAAATGNTGCAAATAATCACATCAATCAANCAATCAATCNATCAATCAATCAATTAT
AAAATAAANCACANT

---lcwg*WQKLEMDLRSRXFVSYYPAIDSGMNSGSYKEFHNDFYLTKDGMKWFWDAYTN
SPKDTNEIYCSPSKCKESDVMGFPXTMIINGEADVLRDEGENFXRLLRKANVPVTHLRIQ
AMVHDFVALXCLDQSRSM*scxgxln*flk*is*skcn*tkmxqiitsixqsixqsinyk
ixhx

Frame A:
---ivlglmakvrngpsfkrxclvlssh**ryefrfl*rip**flsy*rwyemvlgcihq
qskrhq*nlllsfqmqri*chgfpxnndhqw*s*cpp**r*kfr*tit*sxcssxspkns
sngs*frcsxls*sikkhvelxwxpqlis*inlmiqmqlnqnxannhinqxinxsinql*
nkxx


Frame B:
---lcwg*WQKLEMDLRSRXFVSYYPAIDSGMNSGSYKEFHNDFYLTKDGMKWFWDAYTN
SPKDTNEIYCSPSKCKESDVMGFPXTMIINGEADVLRDEGENFXRLLRKANVPVTHLRIQ
AMVHDFVALXCLDQSRSM*scxgxln*flk*is*skcn*tkmxqiitsixqsixqsinyk
ixhx


Frame C:
---cvgvdgks*kwtfvqexlsrtiqpliav*iqvpiknsimisillkmv*ngsgmhtpt
vqktpmkstallpnaknlmswvsxkq*ssmvklmssvmkvkisxdyyvkxmfqxlt*efk
qwfmisll*xvlinqeacrvamxssidflnkshdpnatkpkxck*shqsxnqsinqsiik
*xt

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFJ269 (SFJ269Q) /CSM/SF/SFJ2-C/SFJ269Q.Seq.d/                        902   0.0
CHB380 (CHB380Q) /CSM/CH/CHB3-D/CHB380Q.Seq.d/                        880   0.0
SLE392 (SLE392Q) /CSM/SL/SLE3-D/SLE392Q.Seq.d/                        870   0.0
SFK657 (SFK657Q) /CSM/SF/SFK6-C/SFK657Q.Seq.d/                        870   0.0
SFK642 (SFK642Q) /CSM/SF/SFK6-B/SFK642Q.Seq.d/                        870   0.0
SFJ270 (SFJ270Q) /CSM/SF/SFJ2-C/SFJ270Q.Seq.d/                        870   0.0
SFI745 (SFI745Q) /CSM/SF/SFI7-B/SFI745Q.Seq.d/                        870   0.0
SFI225 (SFI225Q) /CSM/SF/SFI2-B/SFI225Q.Seq.d/                        870   0.0
SFI144 (SFI144Q) /CSM/SF/SFI1-B/SFI144Q.Seq.d/                        870   0.0
SFH139 (SFH139Q) /CSM/SF/SFH1-B/SFH139Q.Seq.d/                        870   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC137069|AC137069.2 Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009C19, from chromosome 3, complete sequence.    50   0.033  1
AC068287|AC068287.5 Homo sapiens BAC clone RP11-532L9 from 2, complete sequence.    46   0.51   1
AF262040|AF262040.1 Arabidopsis thaliana BAC T10I18.               44   2.0    1
AC129851|AC129851.5 Homo sapiens X BAC RP11-669P14 (Roswell Park Cancer Institute Human BAC Library) complete sequence.    42   8.0    1
BU423266|BU423266.1 603955133F1 CSEQRBN09 Gallus gallus cDNA clone ChEST921b10 5', mRNA sequence.    42   8.0    1
AC093276|AC093276.1 Homo sapiens chromosome 5 clone RP11-385P11, WORKING DRAFT SEQUENCE, 27 unordered pieces.    36   9.1    5

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AP009493_770(AP009493|pid:none) Streptomyces griseus subsp. gris...   119   7e-26
CP000750_1934(CP000750|pid:none) Kineococcus radiotolerans SRS30...   117   1e-25
CP000431_3066(CP000431|pid:none) Rhodococcus jostii RHA1, comple...   108   7e-23
AM238663_1209(AM238663|pid:none) Streptomyces ambofaciens ATCC 2...   108   9e-23
(P14326) RecName: Full=Vegetative-specific protein H5;                103   7e-22
AP006618_3275(AP006618|pid:none) Nocardia farcinica IFM 10152 DN...   105   8e-22
CP000826_371(CP000826|pid:none) Serratia proteamaculans 568, com...   105   8e-22
CP000863_1931(CP000863|pid:none) Acinetobacter baumannii ACICU, ...   103   3e-21
AE008922_266(AE008922|pid:none) Xanthomonas campestris pv. campe...   102   8e-21
CP000680_2613(CP000680|pid:none) Pseudomonas mendocina ymp, comp...   102   8e-21

 psg: 0.86  gvh: 0.34  alm: 0.45  top: 0.53  tms: 0.00  mit: 0.19  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 36.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for SFJ269 is cyt

>SFJ269Z.Seq
----------TATTGTGTTGGGGTTGATGGCAAAAGTTAGAAATGGACCTTCGTTCAAGA
GANTTTGTCTCGTACTATCCAGCCATTGATAGCGGTATGAATTCAGGTTCCTATAAAGAA
TTCCATAATGATTTCTATCTTACTAAAGATGGTATGAAATGGTTCTGGGATGCATACACC
AACAGTCCAAAAGACACCAATGAAATCTACTGCTCTCCTTCCAAATGCAAAGAATCTGAT
GTCATGGGTTTCCCANAAACAATGATCATCAATGGTGAAGCTGATGTCCTCCGTGATGAA
GGTGAAAATTTCGNTAGACTATTACGTAAAGCNAATGTTCCAGTNACTCACCTAAGAATT
CAAGCAATGGTTCATGATTTCGTTGCTCTAANCTGTCTTGATCAATCAAGAAGCATGTAG
AGTTGCNATGGANTCCTCAATTGATTTCTTAAATAAATCTCATGATCCAAATGCAACTAA
ACCAAAATGNTGCAAATAATCACATCAATCAANCAATCAATCNATCAATCAATCAATTAT
AAAATAAANCACANT