>SFJ209 (SFJ209Q) /CSM/SF/SFJ2-A/SFJ209Q.Seq.d/
AAATTGAACAAGTTAACCAATTAAAANCTGAACATGGTGACANAATCATTGGTACCTGTA
CTGNNGCACAAGCTTATGGNGGTATGAGATCAGTTAAATCATTAGTTACTGAAACATCAT
CATTAGATCCAGAANAAGGCATTAGATTCCGTGGTTTAACAACTCCCAGAATGTCAAGAG
AAATTACCAAAAGCTCCAGGTGGTGCTGAACCATTACCAGAAGGTATTXXXXXXXXXX

IEQVNQLKXEHGDXIIGTCTXAQAYGGMRSVKSLVTETSSLDPEXGIRFRGLTTPRMSRE
ITKSSRWC*titrry---

Frame A:
klnkltn*xlnmvtxslvpvlxhklmxv*dqlnh*llkhhh*iqxkaldsvv*qlpecqe
klpkapggaeplpeg---


Frame B:
n*ts*pikx*tw*xnhwylyxxtslwxyeis*iisy*niiirsrxrh*ipwfnnsqnvkr
nyqklqvvlnhyqkv---


Frame C:
IEQVNQLKXEHGDXIIGTCTXAQAYGGMRSVKSLVTETSSLDPEXGIRFRGLTTPRMSRE
ITKSSRWC*titrry---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFJ209 (SFJ209Q) /CSM/SF/SFJ2-A/SFJ209Q.Seq.d/                        416   e-116
VSJ738 (VSJ738Q) /CSM/VS/VSJ7-B/VSJ738Q.Seq.d/                        392   e-109
VFO894 (VFO894Q) /CSM/VF/VFO8-D/VFO894Q.Seq.d/                        392   e-109
VFO812 (VFO812Q) /CSM/VF/VFO8-A/VFO812Q.Seq.d/                        392   e-109
VFO680 (VFO680Q) /CSM/VF/VFO6-D/VFO680Q.Seq.d/                        392   e-109
VFO296 (VFO296Q) /CSM/VF/VFO2-D/VFO296Q.Seq.d/                        392   e-109
VFO156 (VFO156Q) /CSM/VF/VFO1-C/VFO156Q.Seq.d/                        392   e-109
VFO142 (VFO142Q) /CSM/VF/VFO1-B/VFO142Q.Seq.d/                        392   e-109
VFO108 (VFO108Q) /CSM/VF/VFO1-A/VFO108Q.Seq.d/                        392   e-109
VFN772 (VFN772Q) /CSM/VF/VFN7-C/VFN772Q.Seq.d/                        392   e-109

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.   168   3e-91  3
BD309247|BD309247.1 Drug targets in Candida albicans.              52   0.003  1
AX536976|AX536976.1 Sequence 577 from Patent WO02064766.           52   0.003  1
CD526170|CD526170.1 kw31d09.y1 Strongyloides ratti PA female naive pAMP1 v1 Strongyloides ratti cDNA 5' similar to SW:CISY_CAEEL P34575 PROBABLE CITRATE SYNTHASE, MITOCHONDRIAL PRECURSOR ;, mRNA sequence.    44   0.82   1
BI513349|BI513349.1 BB160012B10E07 Bee Brain Normalized Library, BB16 Apis mellifera cDNA clone BB160012B10E07 5', mRNA sequence.    44   0.82   1
BX005333|BX005333.6 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone.    36   1.2    2
BX511056|BX511056.3 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone  DKEY-11I9.    36   1.7    2
BZ603556|BZ603556.1 WHABB19TR Human MCF7 breast cancer cell line library (MCF7_1) Homo sapiens genomic clone MCF7_1-7C14, DNA sequence.    32   2.3    2
AQ744490|AQ744490.1 HS_5508_A1_A12_T7A RPCI-11 Human Male BAC Library Homo sapiens genomic clone Plate=1084 Col=23 Row=A, genomic survey sequence.    32   2.4    2
CB251720|CB251720.1 1066 Aedes aegypti (Red) midgut cDNA library Aedes aegypti cDNA clone 975 5', mRNA sequence.    42   3.2    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116305_8(AC116305|pid:none) Dictyostelium discoideum chromosom...   101   7e-21
(Q553V1) RecName: Full=Citrate synthase, mitochondrial;         ...   101   7e-21
CR382131_112(CR382131|pid:none) Yarrowia lipolytica strain CLIB1...    69   5e-16
FM865901_1(FM865901|pid:none) Brissopsis lyrifera partial mRNA f...    58   4e-14
AY085647_1(AY085647|pid:none) Arabidopsis thaliana clone 16528 m...    57   8e-13
(P20115) RecName: Full=Citrate synthase 4, mitochondrial;       ...    57   8e-13
CR380954_165(CR380954|pid:none) Candida glabrata strain CBS138 c...    68   1e-12
(O80433) RecName: Full=Citrate synthase, mitochondrial;         ...    59   1e-12
AF193854_1(AF193854|pid:none) Saccharomyces kluyveri putative ci...    74   2e-12
(P00890) RecName: Full=Citrate synthase, mitochondrial;         ...    73   3e-12

 psg: 0.75  gvh: 0.55  alm: 0.53  top: 0.53  tms: 0.00  mit: 0.18  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 24.0 %: nuclear
	 16.0 %: cytoskeletal
	 12.0 %: mitochondrial
	  4.0 %: Golgi
	  4.0 %: vacuolar
	  4.0 %: endoplasmic reticulum

>> prediction for SFJ209 is cyt

>SFJ209F.Seq
AAATTGAACAAGTTAACCAATTAAAANCTGAACATGGTGACANAATCATTGGTACCTGTA
CTGNNGCACAAGCTTATGGNGGTATGAGATCAGTTAAATCATTAGTTACTGAAACATCAT
CATTAGATCCAGAANAAGGCATTAGATTCCGTGGTTTAACAACTCCCAGAATGTCAAGAG
AAATTACCAAAAGCTCCAGGTGGTGCTGAACCATTACCAGAAGGTATT----------