>SFJ169 (SFJ169Q) /CSM/SF/SFJ1-C/SFJ169Q.Seq.d/
TGGCCTACTGGAACACACACTTTTTTATACATATAATATAGTTTTTAGTTTTTATAATTT
GTTTTTTTTTTTTTATAANAATTAAATNGNGTAAAAAAAAAAGGXXXXXXXXXX

GLLEHTLFYTYNIVFSFYNLFFFFYXN*xx*kkk---

Frame A:
wptgthtflyi*ysf*fl*fvfffl*xlnxvkkk---


Frame B:
GLLEHTLFYTYNIVFSFYNLFFFFYXN*xx*kkk---


Frame C:
aywnthffihii*flvfiicffffixikxxkkk---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFJ169 (SFJ169Q) /CSM/SF/SFJ1-C/SFJ169Q.Seq.d/                         38   0.025
CFG730 (CFG730Q) /CSM/CF/CFG7-B/CFG730Q.Seq.d/                         38   0.025
SHF203 (SHF203Q) /CSM/SH/SHF2-A/SHF203Q.Seq.d/                         34   0.39
SHE844 (SHE844Q) /CSM/SH/SHE8-B/SHE844Q.Seq.d/                         34   0.39
AFA233 (AFA233Q) /CSM/AF/AFA2-B/AFA233Q.Seq.d/                         34   0.39
VHJ604 (VHJ604Q) /CSM/VH/VHJ6-A/VHJ604Q.Seq.d/                         32   1.5
CHP418 (CHP418Q) /CSM/CH/CHP4-A/CHP418Q.Seq.d/                         32   1.5
AHM878 (AHM878Q) /CSM/AH/AHM8-D/AHM878Q.Seq.d/                         32   1.5
AFJ307 (AFJ307Q) /CSM/AF/AFJ3-A/AFJ307Q.Seq.d/                         32   1.5
VHQ368 (VHQ368Q) /CSM/VH/VHQ3-C/VHQ368Q.Seq.d/                         30   6.1

 ***** No hits found ******

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Hits to DB: 151,921
Number of Sequences: 31034866
Number of extensions: 151921
Number of successful extensions: 38640
Number of sequences better than 10.0: 0
length of query: 114
length of database: T,553,065,838
effective HSP length: 21
effective length of query: 93
effective length of database: S,901,333,652
effective search space: 3338824029636
effective search space used: 3338824029636
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3101297
Number of Hits to DB: 80,768,545

 psg: 0.75  gvh: 0.23  alm: 0.41  top: 0.53  tms: 0.00  mit: 0.31  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: nuclear
	 32.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: plasma membrane
	  4.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: vacuolar

>> prediction for SFJ169 is nuc

>SFJ169F.Seq
TGGCCTACTGGAACACACACTTTTTTATACATATAATATAGTTTTTAGTTTTTATAATTT
GTTTTTTTTTTTTTATAANAATTAAATNGNGTAAAAAAAAAAGG----------