>SFI877 (SFI877Q) /CSM/SF/SFI8-D/SFI877Q.Seq.d/
GATGATGGAAATGAGTATACTTCATCAAATAAGATCTTCATNAAACTNACTATATCCATA
TTTTAATATTTAGTAATGAAAATTTATCGNCATTATATTATAGTXXXXXXXXXXCTCCAA
ATAANCCTGATACTTATTCTTATTGATAGAGATGGTACACATTTTAGAATTATTTTAAAT
TTTTTAAGAGGTGATTGTTCAAATATTCCAGAGTGTGAACAAATTAGAAATGAATTATAT
GTTGAAGCAGATTTTNATTGTTTATCAGGTTTAAAAGNATTGTTATATCCATATCATTTT
TATCAANCAAAAATTTTATCTGTTNAANTATCAAAAGATTTAATTAGATTATTAAAATCA
NAATTACAAATTAAAAAAACAAGATTATTATATAGAGGATCAGATAATGATTTTTCATCA
AAGAGATTTCATGAATTATGTGATTTTAAAGGATCCNCAATTACNATTATTAGATCAAAG
GATTGTATATTTGGAGGATANNCNAGTCGTAATTGGACATTGTCTACCCAATATACNCAA
GATGATAAATCATTTNNATTTGATTTGGCNAANATACCACCATCAATTANNANAAAAGAA
NAAGGTTCATCAAGTCAANCGNTTTATTCAAACATTAANTACGGT

*wk*vyfik*DLHXTXYIHILIFSNENLSXLYYS---

---LQIXLILILIDRDGTHFRIILNFLRGDCSNIPECEQIRNELYVEADFXCLSGLKXLL
YPYHFYQXKILSVXXSKDLIRLLKSXLQIKKTRLLYRGSDNDFSSKRFHELCDFKGSXIT
IIRSKDCIFGGXXSRNWTLSTQYTQDDKSFXFDLAXIPPSIXXKEXGSSSQXXYSNIXYG

Frame A:
ddgneytssnkifxkltisif*ylvmkiyrhyii---

---LQIXLILILIDRDGTHFRIILNFLRGDCSNIPECEQIRNELYVEADFXCLSGLKXLL
YPYHFYQXKILSVXXSKDLIRLLKSXLQIKKTRLLYRGSDNDFSSKRFHELCDFKGSXIT
IIRSKDCIFGGXXSRNWTLSTQYTQDDKSFXFDLAXIPPSIXXKEXGSSSQXXYSNIXYG

Frame B:
mmemsilhqirssxnxlypyfni***kfixiil*---

---sk*x*ylflliemvhilelf*if*evivqifqsvnklemnymlkqixivyqv*kxcy
ihiifixqkfylxxyqki*ldy*nxnyklkkqdyyiedqimifhqrdfmnyvilkdpqlx
lldqrivyledxxvvighclpnixkminhxxliwxxyhhqlxxkxkvhqvxrfiqtlxt

Frame C:
*wk*vyfik*DLHXTXYIHILIFSNENLSXLYYS---

---pnxpdtysy**rwytf*nyfkffkr*lfkysrv*tn*k*iic*srfxlfirfkxivi
sisflsxknficxxikrfn*iikixitn*knkiii*rir**ffikeis*im*f*rixnyx
y*ikglyiwrixxs*ldivypiyxr**iixi*fgxxttinxxkrxrfiksxxlfkh*xr

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFI877 (SFI877Q) /CSM/SF/SFI8-D/SFI877Q.Seq.d/                        537   e-152
SFI477 (SFI477Q) /CSM/SF/SFI4-D/SFI477Q.Seq.d/                        410   e-113
CFI843 (CFI843Q) /CSM/CF/CFI8-B/CFI843Q.Seq.d/                        410   e-113
CFF701 (CFF701Q) /CSM/CF/CFF7-A/CFF701Q.Seq.d/                        410   e-113
CFC308 (CFC308Q) /CSM/CF/CFC3-A/CFC308Q.Seq.d/                        410   e-113
CFC559 (CFC559Q) /CSM/CF/CFC5-C/CFC559Q.Seq.d/                        396   e-109
SSG557 (SSG557Q) /CSM/SS/SSG5-C/SSG557Q.Seq.d/                        371   e-102
SSG621 (SSG621Q) /CSM/SS/SSG6-A/SSG621Q.Seq.d/                        280   3e-74
SFK467 (SFK467Q) /CSM/SF/SFK4-C/SFK467Q.Seq.d/                        264   2e-69
CHE190 (CHE190Q) /CSM/CH/CHE1-D/CHE190Q.Seq.d/                        194   1e-48

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           36   5e-05  22
AL929355|AL929355.1 Plasmodium falciparum strain 3D7, chromosome 9; segment 1/5.    38   3e-04  11
AE014842|AE014842.1 Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete sequence.    38   0.008  11
BH967150|BH967150.1 odd89h07.b1 B.oleracea002 Brassica oleracea genomic, DNA sequence.    44   0.020  2
AE014846|AE014846.1 Plasmodium falciparum 3D7 chromosome 12, section 3 of 9 of the complete sequence.    34   0.022  11
AL929352|AL929352.1 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4.    30   0.026  14
AB063521|AB063521.2 Wigglesworthia brevipalpis DNA, complete genome, section 1/2.    38   0.028  11
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.    34   0.034  12
AC006788|AC006788.1 Caenorhabditis elegans clone Y49C4, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.    50   0.038  1
AF039044|AF039044.1 Caenorhabditis elegans cosmid F48G7, complete sequence.    50   0.038  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU643477_9(EU643477|pid:none) Adineta vaga clone Av_TEL_K_A retr...    44   0.004
BC155645_1(BC155645|pid:none) Danio rerio si:ch211-197g15.7, mRN...    43   0.009
BX649327_11(BX649327|pid:none) Zebrafish DNA sequence from clone...    43   0.009
BX470229_5(BX470229|pid:none) Zebrafish DNA sequence from clone ...    42   0.015
AK175311_1(AK175311|pid:none) Arabidopsis thaliana mRNA, complet...    42   0.019
T25976(T25976)hypothetical protein ZC239.14 - Caenorhabditis ele...    41   0.025
U80842_14(U80842|pid:none) Caenorhabditis elegans cosmid ZC239, ...    41   0.025
AY222912_1(AY222912|pid:none) Schistosoma japonicum clone ZZD125...    41   0.033
AY890894_1(AY890894|pid:none) Synthetic construct Homo sapiens c...    40   0.043
(Q5RBH4) RecName: Full=BTB/POZ domain-containing protein TNFAIP1...    40   0.043

 psg: 0.75  gvh: 0.38  alm: 0.31  top: 0.63  tms: 0.07  mit: 0.18  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.08  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 1.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 48.0 %: nuclear
	 28.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: Golgi
	  4.0 %: vesicles of secretory system

>> prediction for SFI877 is nuc

>SFI877F.Seq
GATGATGGAAATGAGTATACTTCATCAAATAAGATCTTCATNAAACTNACTATATCCATA
TTTTAATATTTAGTAATGAAAATTTATCGNCATTATATTATAGT----------

>SFI877Z.Seq
NNNNNNNNNNCTCCAAATAANCCTGATACTTATTCTTATTGATAGAGATGGTACACATTT
TAGAATTATTTTAAATTTTTTAAGAGGTGATTGTTCAAATATTCCAGAGTGTGAACAAAT
TAGAAATGAATTATATGTTGAAGCAGATTTTNATTGTTTATCAGGTTTAAAAGNATTGTT
ATATCCATATCATTTTTATCAANCAAAAATTTTATCTGTTNAANTATCAAAAGATTTAAT
TAGATTATTAAAATCANAATTACAAATTAAAAAAACAAGATTATTATATAGAGGATCAGA
TAATGATTTTTCATCAAAGAGATTTCATGAATTATGTGATTTTAAAGGATCCNCAATTAC
NATTATTAGATCAAAGGATTGTATATTTGGAGGATANNCNAGTCGTAATTGGACATTGTC
TACCCAATATACNCAAGATGATAAATCATTTNNATTTGATTTGGCNAANATACCACCATC
AATTANNANAAAAGAANAAGGTTCATCAAGTCAANCGNTTTATTCAAACATTAANTACGG
T

>SFI877P.Seq
GATGATGGAAATGAGTATACTTCATCAAATAAGATCTTCATNAAACTNACTATATCCATA
TTTTAATATTTAGTAATGAAAATTTATCGNCATTATATTATAGT----------CTCCAA
ATAANCCTGATACTTATTCTTATTGATAGAGATGGTACACATTTTAGAATTATTTTAAAT
TTTTTAAGAGGTGATTGTTCAAATATTCCAGAGTGTGAACAAATTAGAAATGAATTATAT
GTTGAAGCAGATTTTNATTGTTTATCAGGTTTAAAAGNATTGTTATATCCATATCATTTT
TATCAANCAAAAATTTTATCTGTTNAANTATCAAAAGATTTAATTAGATTATTAAAATCA
NAATTACAAATTAAAAAAACAAGATTATTATATAGAGGATCAGATAATGATTTTTCATCA
AAGAGATTTCATGAATTATGTGATTTTAAAGGATCCNCAATTACNATTATTAGATCAAAG
GATTGTATATTTGGAGGATANNCNAGTCGTAATTGGACATTGTCTACCCAATATACNCAA
GATGATAAATCATTTNNATTTGATTTGGCNAANATACCACCATCAATTANNANAAAAGAA
NAAGGTTCATCAAGTCAANCGNTTTATTCAAACATTAANTACGGT