>SFI256 (SFI256Q) /CSM/SF/SFI2-C/SFI256Q.Seq.d/
ACTGTTGGCCTACTGGNATTTGAAATGGGGAAGTGGATCAGGGAGAGCTTTNTAATGGAA
CTAAAATGGTAAATTCATCAAATATTGTTTTTGTTAGTATAAGATTATAGATTAGGTATT
TTTGGTATGCTTCAAACTGATACAATTTCAGGGAAATTTAGCATTCGAAGATCAATTATT
AGCATTGAAATGGGTTCAACAAAATATTAAAGCATTTGGTGGTGATCCTAATCAAGTTAC
AGTTTTTGGTGAAAGTGCAGGTGGTACAAGTTGCGGCACTTTCATTTAACATCACCAGCT
TCTGCTGGTTTATTTTTCAAAGATTATCAGTTGAATTCAAATCCATGGXXXXXXXXXX

llaywxlkwgsgsgrax*wn*ngkfikycfc*ykiid*VFLVCFKLIQFQGNLAFEDQLL
ALKWVQQNIKAFGGDPNQVTVFGESAGGTSCGTFI*hhqlllvyfskiis*iqih---

Frame A:
tvgllxfemgkwiresfxmelkw*ihqilfllv*dyrlgifgmlqtdtisgkfsirrsii
siemgstky*siww*s*ssysfw*kcrwyklrhfhltspasaglffkdyqlnsnp---


Frame B:
llaywxlkwgsgsgrax*wn*ngkfikycfc*ykiid*VFLVCFKLIQFQGNLAFEDQLL
ALKWVQQNIKAFGGDPNQVTVFGESAGGTSCGTFI*hhqlllvyfskiis*iqih---


Frame C:
cwptgi*ngevdqgelxngtkmvnssnivfvsirl*iryfwyasn*ynfrei*hskiny*
h*ngfnkilkhlvviliklqflvkvqvvqvaalsfnitsfcwfifqrlsvefksm---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFI256 (SFI256Q) /CSM/SF/SFI2-C/SFI256Q.Seq.d/                        678   0.0
SSJ535 (SSJ535Q) /CSM/SS/SSJ5-B/SSJ535Q.Seq.d/                        507   e-143
VFI132 (VFI132Q) /CSM/VF/VFI1-B/VFI132Q.Seq.d/                        337   7e-92
VFM170 (VFM170Q) /CSM/VF/VFM1-C/VFM170Q.Seq.d/                        101   7e-21
VFI777 (VFI777Q) /CSM/VF/VFI7-D/VFI777Q.Seq.d/                         66   4e-10
VFG301 (VFG301Q) /CSM/VF/VFG3-A/VFG301Q.Seq.d/                         66   4e-10
CHD689 (CHD689Q) /CSM/CH/CHD6-D/CHD689Q.Seq.d/                         66   4e-10
AFG615 (AFG615Q) /CSM/AF/AFG6-A/AFG615Q.Seq.d/                         66   4e-10
AFE272 (AFE272Q) /CSM/AF/AFE2-C/AFE272Q.Seq.d/                         66   4e-10
VFH802 (VFH802Q) /CSM/VF/VFH8-A/VFH802Q.Seq.d/                         60   2e-08

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X52464|X52464.1 D.discoideum CP mRNA for crystal protein.          66   3e-07  1
BX897664|BX897664.1 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone DKEY-103P22.    38   0.19   5
AL121869|AL121869.19 Human DNA sequence from clone RP13-138P15 on chromosome X. Contains  a KRT18 (keratin 18) (CYK18) pseudogene, a pseudogene similar to  part of SNX3 (sorting nexin 3), the last exon of the gene KIAA1326,  ESTs, STSs and GSSs.    46   0.32   1
AC010081|AC010081.4 Homo sapiens BAC clone RP11-65E7 from Y, complete sequence.    46   0.32   1
BX559499|BX559499.1 Glossina morsitans morsitans (Tseatse fly) EST from adult infected  midgut library, clone Tse44a03_q1c.    46   0.32   1
AL845437|AL845437.14 Zebrafish DNA sequence from clone DKEY-98J1 in linkage group 23.    32   0.48   7
AC006352|AC006352.3 Homo sapiens PAC clone RP5-1044J9 from 16, complete sequence.    38   0.55   5
AC142389|AC142389.1 Homo sapiens chromosome 16 clone RP11-867L16, WORKING DRAFT SEQUENCE, 8 unordered pieces.    38   0.75   6
AC127664|AC127664.3 Rattus norvegicus clone CH230-101A1, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.    40   0.76   4
AC010243|AC010243.7 Homo sapiens chromosome 5 clone CTC-361G14, complete sequence.    36   1.1    7

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AP007171_164(AP007171|pid:none) Aspergillus oryzae RIB40 genomic...    70   2e-11
CP000480_2896(CP000480|pid:none) Mycobacterium smegmatis str. MC...    63   6e-11
AB208651_1(AB208651|pid:none) Athalia rosae COE mRNA for carboxy...    61   1e-10
EU727142_1(EU727142|pid:none) Bombyx mori carboxylesterase CarE-...    64   2e-10
BT045023_1(BT045023|pid:none) Salmo salar clone ssal-rgf-510-033...    66   3e-10
CP000518_2331(CP000518|pid:none) Mycobacterium sp. KMS, complete...    65   3e-10
BC155642_1(BC155642|pid:none) Danio rerio si:ch211-93f2.1, mRNA ...    65   4e-10
BT003545_1(BT003545|pid:none) Drosophila melanogaster RE03380 fu...    66   4e-10
AE014297_3467(AE014297|pid:none) Drosophila melanogaster chromos...    66   4e-10
AE014297_3468(AE014297|pid:none) Drosophila melanogaster chromos...    66   4e-10

 psg: 0.76  gvh: 0.49  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.24  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 32.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: vesicles of secretory system

>> prediction for SFI256 is cyt

>SFI256F.Seq
ACTGTTGGCCTACTGGNATTTGAAATGGGGAAGTGGATCAGGGAGAGCTTTNTAATGGAA
CTAAAATGGTAAATTCATCAAATATTGTTTTTGTTAGTATAAGATTATAGATTAGGTATT
TTTGGTATGCTTCAAACTGATACAATTTCAGGGAAATTTAGCATTCGAAGATCAATTATT
AGCATTGAAATGGGTTCAACAAAATATTAAAGCATTTGGTGGTGATCCTAATCAAGTTAC
AGTTTTTGGTGAAAGTGCAGGTGGTACAAGTTGCGGCACTTTCATTTAACATCACCAGCT
TCTGCTGGTTTATTTTTCAAAGATTATCAGTTGAATTCAAATCCATGG----------