>SFI218 (SFI218Q) /CSM/SF/SFI2-A/SFI218Q.Seq.d/
XXXXXXXXXXTGAACCAATTGCAGCAGGTTTAGGTGTTGACGGATCCCATATGTGGAATC
ATGATTGGAGACATGCTGCAGCATTTGTAATGGGACCACCAATTCGTCCAGATCCAAGAA
CTAAAGGTGTATTAATGGATTATTTAGCAAGAGGTGACCTCGATTGTGTTGGTACTGATA
ATTGTACATTCTGTGCTGACCAAAAAGCAATGGGTAAAGATGATTTCACCAAAATTCCAA
ATGGTGTAAATGGTGTTGAAGATAGAATGTCAATCGTTTGGGAGGATGGTGTCAATACTG
GTAAATTAACATGGTGTCAATTCGTTAGAGCAACCTCTTCAGAAGCTGCTCGTATTTTCA
ATATTTATCCAAGAAAAGGTCGTATCGATGTTGGTTGTGATGGTGATATCGTCATTTGGG
ATCCAAATCAATCAAAAACCATCTCAAAGGATACTCATCATCATGCAGCTGATTTTAACA
TTTTCGAAGGTATCAAAGTAACTGGTATAGCAGTTACCACAATCGTAGCTGGTAATATCG
TTTGGTCTGATAATAAATTATCATGTGTCAAAGGTAGTGGTAGATTTGTACCAAGACCAC
CATTTGGTCCAGTATTTGATGGTATTGAACAAAGAGATAAGGTTAGAAATGAATTATTAA
GAAAAGTTGATAGAAAACCATACGAAGANATAATACAAAAAATTCATCAAAATAAATACA
TTTTATACATATAT

---EPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGTDN
CTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVWEDGVNTGKLTWCQFVRATSSEAARIFN
IYPRKGRIDVGCDGDIVIWDPNQSKTISKDTHHHAADFNIFEGIKVTGIAVTTIVAGNIV
WSDNKLSCVKGSGRFVPRPPFGPVFDGIEQRDKVRNELLRKVDRKPYEXIIQKIHQNKYI
LYIY

Frame A:
---EPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGTDN
CTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVWEDGVNTGKLTWCQFVRATSSEAARIFN
IYPRKGRIDVGCDGDIVIWDPNQSKTISKDTHHHAADFNIFEGIKVTGIAVTTIVAGNIV
WSDNKLSCVKGSGRFVPRPPFGPVFDGIEQRDKVRNELLRKVDRKPYEXIIQKIHQNKYI
LYIY


Frame B:
---nqlqqv*vltdpicgimigdmlqhl*wdhqfvqiqelkvy*wii*qevtsivlvlii
vhsvltkkqwvkmispkfqmv*mvlkiecqsfgrmvsilvn*hgvnsleqplqkllvfsi
fiqekvvsmlvvmvissfgiqinqkpsqriliimqliltfskvsk*lv*qlpqs*lvisf
gliinyhvskvvvdlyqdhhlvqylmvlnkeirlemny*eklienhtkx*ykkfikintf
yty


Frame C:
---tncsrfrc*ripyves*letccsicngttnssrskn*rcinglfskr*prlcwy**l
yilc*pksng*r*fhqnskwckwc*r*nvnrlggwcqyw*inmvsir*snlfrscsyfqy
lskkrsyrcwl*w*yrhlgsksiknhlkgyssscs*f*hfrryqsnwyssyhnrsw*yrl
v***iimcqr*w*ictkttiwssi*wy*tkr*g*k*iikks**ktirrxntknssk*ihf
ihi

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFI218 (SFI218Q) /CSM/SF/SFI2-A/SFI218Q.Seq.d/                       1429   0.0
SFG423 (SFG423Q) /CSM/SF/SFG4-A/SFG423Q.Seq.d/                       1370   0.0
SFJ676 (SFJ676Q) /CSM/SF/SFJ6-D/SFJ676Q.Seq.d/                       1342   0.0
VFO256 (VFO256Q) /CSM/VF/VFO2-C/VFO256Q.Seq.d/                       1330   0.0
VFG406 (VFG406Q) /CSM/VF/VFG4-A/VFG406Q.Seq.d/                       1316   0.0
VFO840 (VFO840Q) /CSM/VF/VFO8-B/VFO840Q.Seq.d/                       1296   0.0
VFK388 (VFK388Q) /CSM/VF/VFK3-D/VFK388Q.Seq.d/                       1296   0.0
AFD823 (AFD823Q) /CSM/AF/AFD8-A/AFD823Q.Seq.d/                       1221   0.0
VFC676 (VFC676Q) /CSM/VF/VFC6-D/VFC676Q.Seq.d/                       1100   0.0
SFH313 (SFH313Q) /CSM/SF/SFH3-A/SFH313Q.Seq.d/                        868   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AF465757|AF465757.1 Dictyostelium discoideum dihydropyrimidine amidohydrolase (pyd2) mRNA, complete cds.  1312   0.0    2
AB040993|AB040993.1 Caenorhabditis elegans mRNA for CeCRMP/DHP-2, complete cds.    78   9e-15  4
AU213306|AU213306.1 Caenorhabditis elegans cDNA clone:yk798b11 : 3' end, single read.    78   4e-14  3
Z68882|Z68882.1 Caenorhabditis elegans cosmid C47E12.              78   3e-13  2
AV965541|AV965541.1 Ciona intestinalis cDNA, clone:cieg19i11, 5' end, single read.    60   1e-09  2
BW031100|BW031100.1 Ciona intestinalis cDNA, clone:cibd017e13, 5' end, single read.    60   1e-09  2
AC113921|AC113921.5 Rattus norvegicus clone CH230-398O16, *** SEQUENCING IN PROGRESS ***, 17 unordered pieces.    54   3e-09  3
AC126143|AC126143.3 Rattus norvegicus clone CH230-169J9, *** SEQUENCING IN PROGRESS ***, 14 unordered pieces.    54   3e-07  2
BP190536|BP190536.1 Dugesia japonica cDNA, clone: 04881_HH, expressed in the head.    62   5e-07  2
BW267319|BW267319.1 Ciona intestinalis cDNA, clone:cign047a20, 5' end, single read.    60   4e-05  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF465757_1(AF465757|pid:none) Dictyostelium discoideum dihydropy...   439   e-122
BC084771_1(BC084771|pid:none) Xenopus laevis hypothetical LOC495...   254   2e-66
(Q18677) RecName: Full=Dihydropyrimidinase 2;          EC=3.5.2....   248   2e-64
(Q63150) RecName: Full=Dihydropyrimidinase;          Short=DHPas...   245   9e-64
(Q21773) RecName: Full=Dihydropyrimidinase 1;          EC=3.5.2....   244   2e-63
D63704_1(D63704|pid:none) Rat mRNA for dihydropyrimidinase, comp...   244   2e-63
AK004899_1(AK004899|pid:none) Mus musculus adult male liver cDNA...   240   3e-62
AF227731_1(AF227731|pid:none) Mus musculus dihydropyrimidinase m...   236   5e-61
T23968(T23968)hypothetical protein R06C7.3 - Caenorhabditis eleg...   228   2e-58
FN314069_1(FN314069|pid:none) Schistosoma japonicum isolate Anhu...   216   7e-55

 psg: 0.75  gvh: 0.44  alm: 0.34  top: 0.53  tms: 0.00  mit: 0.06  mip: 0.00
 nuc: 0.06  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: cytoplasmic
	 28.0 %: nuclear
	  8.0 %: vesicles of secretory system
	  4.0 %: Golgi
	  4.0 %: mitochondrial

>> prediction for SFI218 is cyt

>SFI218Z.Seq
NNNNNNNNNNTGAACCAATTGCAGCAGGTTTAGGTGTTGACGGATCCCATATGTGGAATC
ATGATTGGAGACATGCTGCAGCATTTGTAATGGGACCACCAATTCGTCCAGATCCAAGAA
CTAAAGGTGTATTAATGGATTATTTAGCAAGAGGTGACCTCGATTGTGTTGGTACTGATA
ATTGTACATTCTGTGCTGACCAAAAAGCAATGGGTAAAGATGATTTCACCAAAATTCCAA
ATGGTGTAAATGGTGTTGAAGATAGAATGTCAATCGTTTGGGAGGATGGTGTCAATACTG
GTAAATTAACATGGTGTCAATTCGTTAGAGCAACCTCTTCAGAAGCTGCTCGTATTTTCA
ATATTTATCCAAGAAAAGGTCGTATCGATGTTGGTTGTGATGGTGATATCGTCATTTGGG
ATCCAAATCAATCAAAAACCATCTCAAAGGATACTCATCATCATGCAGCTGATTTTAACA
TTTTCGAAGGTATCAAAGTAACTGGTATAGCAGTTACCACAATCGTAGCTGGTAATATCG
TTTGGTCTGATAATAAATTATCATGTGTCAAAGGTAGTGGTAGATTTGTACCAAGACCAC
CATTTGGTCCAGTATTTGATGGTATTGAACAAAGAGATAAGGTTAGAAATGAATTATTAA
GAAAAGTTGATAGAAAACCATACGAAGANATAATACAAAAAATTCATCAAAATAAATACA
TTTTATACATATAT